Baxter JD, Mayers DL, Wentworth DN, Neaton JD, Hoover ML, Winters MA, Mannheimer SB, Thompson MA, Abrams DI, Brizz BJ, Ioannidis JP, Merigan TC., A randomized study of antiretroviral management based on plasma genotypic antiretroviral resistance testing in patients failing therapy. CPCRA 046 Study Team for the Terry Beirn Community Programs for Clinical Research on AIDS. AIDS. 2000 Jun 16;14(9):F83-93.

Nucleotide sequences in fasta format
GART_PR_fasta.txt,   GART_RT_fasta.txt
Composite alignment (of sequences at baseline)
GART_PR_composite.html,   GART_RT_composite.html
List of sequences with stop codon, ambiguity codon and unusual residues
GART_PR_QA.txt,   GART_RT_QA.txt

Method: Direct PCR, Dideoxy terminator sequencing
Sample: Plasma
Timing: Real-time

Integrated view of ARV, genotypes, RNA and CD4 on 153 patients

The Microsoft Access database GARTSummary.mdb was created on 153 patients for whom sequences are available and contains tables with treatment, mutations, RNA levels and CD4 counts.

The files contained GARTSummary.mdb (the description of each file)

• Treatment history: GART_RX.html (excel-frendly version GART_RX.txt)
• Sequences :
  • GART_PR.html (excel-frendly version GART_PR.txt)
  • GART_RT.html (excel-frendly version GART_RT.txt)
• Outcomes:
  • GART_RNA.html (excel-frendly version GART_RNA.txt)
  • GART_CD4.html (excel-frendly version GART_CD4.txt)