Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

How to Cite the HIV Drug Resistance Database

Database
 
Rhee (2003)

Reproduced with Permission from NAR Online
Soo-Yon Rhee, Matthew J. Gonzales, Rami Kantor, Bradley J. Betts, Jaideep Ravela, and Robert W. Shafer (2003) Human immunodeficiency virus reverse transcriptase and protease sequence database. Nucleic Acids Research, 31(1), 298-303.
 
Shafer (2006)

Shafer RW(2006). Rationale and Uses of a Public HIV Drug-Resistance Database. Journal of Infectious Diseases 194 Suppl 1:S51-8

 
HIVdb algorithm
 
Liu (2006)

Liu TF, Shafer RW(2006). Web Resources for HIV type 1 Genotypic-Resistance Test Interpretation. Clin Infect Dis 42(11):1608-18. Epub 2006 Apr 28

 
HIVSeq
 
Rhee (2006)

Rhee SY, Kantor R, Katzenstein DA, Camacho R, Morris L,Sirivichayakul S,Jorgensen L, Brigido LF, Schapiro JM,and Shafer RW for the international Non Subtype B HIV-1 Working Group(2006). HIV-1 pol mutation frequency by subtype and treatment experience: extension of the HIVseq program to seven non-B subtypes. AIDS 20(5):643-651, March 21, 2006

 
Shafer (2000)

Copyright © 2000, Nature America, Inc.
Robert W. Shafer, Duane R. Jung, and Bradley J. Betts. (2000) Human immunodeficiency virus type 1 reverse transcriptase and protease mutation search engine for queries. Nature Medicine, 6(11), 1290-1292.
 

CPR
 
Gifford (2009)

Copyright © 2009, Oxford University Press
Gifford RJ, Liu TF, Rhee SY, Kiuchi M, Hue S, Pillay D, Shafer RW (2009). The calibrated population resistance tool: standardized genotypic estimation of transmitted HIV-1 drug resistance. Bioinformatics, 2009 Mar 20.