<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Inzaule (2018)
Title Primary resistance to integrase strand transfer inhibitors in patients infected with diverse HIV-1 subtypes in sub-Saharan Africa.
Citation J Antimicrob Chemother
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 425
NumPts 425
Subtype C, A, D, CRF02_AG, G, CRF06_cpx, CRF01_AE, CRF56_cpx

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 425 Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
NILUTPM116 NILUTPM116 None    K14R, R20K, L101I, T112I, T124S, T125A, K136T G134K 
ZACHCPM022 ZACHCPM022 None    K14R, D25E, V31I, K34R, S39N, M50I, L101I, T125A, K136Q, V201I, T206S, T218I, L234I, A265V, D278A S283G, D286N 
ZACHCPM023 ZACHCPM023 None    K14R, D25E, V31I, M50I, I72V, L101I, T124A, T125A, K136Q, V201I, L234I, A265V, R269K, D278A S283G 
ZACHCPM025 ZACHCPM025 None    E10D, V31I, S39N, M50I, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, L234I S283G 
ZACHCPM034 ZACHCPM034 None    D25E, V31I, M50R, L101I, T112V, T124N, T125A, K136Q, K156N, V201I, T218I, L234I S283G 
ZACHCPM036 ZACHCPM036 None    E11D, S24N, D25E, I84M, L101I, T112V, T124A, D167E, V201I, T218I, L234I, A265V, D278A S283G 
ZACHCPM038 ZACHCPM038 None    K14R, D25E, V32I, L45V, M50I, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, L234I S283G, D286N 
ZACHCPM042 ZACHCPM042 None    K14R, D25E, V31I, M50T, I72V, L101I, K111Q, T112V, T124A, T125A, K136Q, K173R, G193E, V201I, T218I, L234I, D278A S283G, D288N 
ZACHCPM053 ZACHCPM053 None    K14R, S24G, L28I, L45Q, I72V, L74V, L101I, T112V, T124A, T125A, K136Q, D167E, V201I, L234I, R269K, D278A S283G 
ZACHCPM060 ZACHCPM060 None    K14R, D25E, V31I, L101I, T124A, I135V, K136H, K173R, V201I, I203M, L234I, S255G, A265V, K273Q, D278A S283G 
ZACHCPM065 ZACHCPM065 None    E11D, D25E, V31I, K34R, L45Q, M50I, L101I, T112V, T124A, T125A, G134D, K136Q, V201I, K215N, L234I, D270E, D278A V281M, S283G, D286N 
ZACHCPM069 ZACHCPM069 None    K14R, D25E, V31I, I60V, I72V, I89L, F100Y, L101I, T112I, T124A, T125A, K136Q, V201I, L234I, K273Q, D278A S283G, D286N 
ZACHCPM076 ZACHCPM076 None    V31I, L101I, K111R, T112V, T124N, T125A, K136Q, D167E, V201I, L234I, I251L, A265V, D278A S283G 
ZACHCPM078 ZACHCPM078 None    D25E, S39C, M50I, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, Q216R, T218I, K219Q, L234I, D278T S283G 
ZACHCPM091 ZACHCPM091 None    R20K, D25E, I84L, L101I, T112V, K136Q, V201I, I208L, T218I, L234I, D279G  
ZACHCPM099 ZACHCPM099 None    E10D, D25E, V31I, M50I, F100Y, L101I, T112V, T124A, T125A, K136Q, G163E, V201I, L234I, N254K, S255G, R269K, D278A S283G 
ZACHCPM106 ZACHCPM106 None    K14R, D25E, V31I, K34R, M50T, L74I, A91E, F100Y, L101I, T112V, S119R, T125A, K136Q, V201I, T206S, T218I, L234I, S255N, D278A S283G, R284G 
ZACHCPM107 ZACHCPM107 None    V31I, I72V, L101I, T112V, S119T, T124A, T125A, K136Q, V180I, V201I, T218I, L234I, A265V, D278A S283G 
ZACHCPM108 ZACHCPM108 None    K14R, S24N, D25E, F100Y, L101I, T112V, T124A, T125A, K136Q, I141V, D167E, V201I, L234I, D278A S283G 
ZACHCPM111 ZACHCPM111 None    K14R, D25E, V31I, L101I, T124A, T125A, I135V, K136N, V201I, T218L, L234I, K273Q, D278T S283G, R284G, D288N 
ZACHCPM112 ZACHCPM112 None    K14R, S24N, D25E, L45Q, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, D278A S283G, R284G 
ZACHCPM118 ZACHCPM118 None    S17N, D25E, V31I, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, D167E, V201I, K211R, K219N, N222K, L234V  
ZACHCPM123 ZACHCPM123 None    D6E, E10D, D25E, V31I, F100Y, L101I, T112V, T124A, T125A, K136N, K188R, V201I, L234I, A265V, R269K, D278A V281M, S283G 
ZACHCPM161 ZACHCPM161 None    V31I, M50T, I84M, L101I, T112V, T124A, T125A, K136Q, K188R, V201I, K215N, T218I, L234I, A265V, R269K, D278A S283G 
ZACHCPM165 ZACHCPM165 None    E11D, D25E, V31I, V37I, I84M, T93S, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T206S, L234I, D278A S283G 
ZACHCPM166 ZACHCPM166 None    E11D, S24N, D25E, V31I, M50I, E96D, L101I, G106A, T112V, T124N, T125A, K136Q, D167E, V201I, K211T, L234I, D278A S283G 
ZACHCPM169 ZACHCPM169 None    D25E, V31I, I72V, P90S, F100Y, L101I, T112V, T124A, T125A, D167E, V201I, T206S, K211R, T218I, K219N, N222K, L234I S283G 
ZACHCPM172 ZACHCPM172 None    S24N, D25E, I72V, F100Y, L101I, T112V, T125A, K136Q, V201I, T206S, T218I, K219Q, L234I, D278A S283G 
ZACHCPM192 ZACHCPM192 None    V31I, M50I, L101I, G106A, T112M, S119T, T124A, T125A, K136Q, V150A, D167E, V201I, K215N, T218I, L234I, D256E, R269K, D278A S283G 
ZACHCPM216 ZACHCPM216 None    S17N, D25E, V31I, I72V, I84M, F100Y, L101I, T112V, T124A, T125A, K136H, V201I, T218I, L234I, N254K, S255G S283G 
ZACHCPM232 ZACHCPM232 None    D25E, V31I, L101I, T124S, K136Q, I182V, V201I, K219N, N222K, L234I, D278A S283G 
ZAKARPM002 ZAKARPM002 None    D25E, M50I, T112V, T124N, T125A, K136N, D167E, K188R, V201I, L234I, A265V V281M, S283G, R284G, D286N 
ZAKARPM005 ZAKARPM005 None    K14R, D25E, V31I, L63V, L74I, G106A, T112V, I113L, S119T, T124A, T125A, K136Q, V201I, L234I, D253E, R269K, D278A V180T, S283G 
ZAKARPM007 ZAKARPM007 None    E11D, S17N, V31I, M50I, I60V, A91E, F100Y, L101I, T112V, S119R, T124N, T125A, K136Q, V201I, I208L, T218I, L234I, S255N, R269K, D278A S283G 
ZAKARPM022 ZAKARPM022 None    D25E, M50I, L101I, T112V, S119T, T124A, K136Q, Q177L, V201I, L234I, V260I, R269K, D278A S283G 
ZAKARPM023 ZAKARPM023 None    S17N, D25E, S39C, F100Y, L101I, T112V, T124A, T125A, V201I, T218I, L234I, R269K, D278A S283G, R284G, E287A 
ZAKARPM032 ZAKARPM032 None    K14R, D25E, V31I, I72V, L101I, T112V, T124A, T125A, K136N, K188R, V201I, T218I, L234I, A265V, R269K, D278A S283G 
ZAKARPM037 ZAKARPM037 None    K14R, D25E, K34R, F100Y, L101I, K103R, T112V, T124A, T125A, K136Q, V201I, K211R, T218I, K219Q, L234I, D278A S283G 
ZAKARPM038 ZAKARPM038 None    E11D, R20K, S24N, D25E, V31I, L101I, T112V, T124N, T125A, K136Q, V201I, K215N, T218I, N222K, L234I, R269K, D278A  
ZAKARPM049 ZAKARPM049 None    K14R, D25E, K34R, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, L234I, D270E, D278A S283G 
ZAKARPM053 ZAKARPM053 None    D6E, K14R, R20K, D25E, K34R, M50I, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, D278A S283G 
ZAKARPM056 ZAKARPM056 None    K14R, D25E, V31I, L101I, I113V, S119T, T124A, T125A, I135V, K136N, K188R, V201I, T206S, L234I, I251L, D256E, A265V, K273Q, D278A V281L, S283G 
ZAKARPM058 ZAKARPM058 None    S17N, K34R, I72V, I84M, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, I251L, A265V, D278A S283G 
ZAKARPM062 ZAKARPM062 None    E10D, V31I, I84M, L101I, K111H, T124A, T125A, K136Q, V165I, V201I, L234I, D278A S283G 
ZAKARPM064 ZAKARPM064 None    K14R, D25E, V31I, I72V, L101I, T112V, T124A, K188R, V201I, T206S, K211R, N222K, L234I, I268L, R269K, K273Q, D278A S283G 
ZAKARPM070 ZAKARPM070 None    K14R, D25E, V31I, M50L, G59E, I84M, L101I, T112V, S119P, T124A, T125A, K136Q, V201I, D207N, I220L, Q221H, N222A, L234I, D279G S283G 
ZAKARPM073 ZAKARPM073 None    L45Q, F100Y, L101I, K111R, T124A, T125A, K136Q, G163E, R187K, K211R, T218I, Q221N, L234I, D278A  
ZAKARPM078 ZAKARPM078 None    S17N, S24D, D25E, V31I, M50I, F100Y, L101I, T112V, T124A, T125A, K136Q, D167E, V201I, Q221S, L234I, D278A S283G 
ZAKARPM084 ZAKARPM084 None    K14R, D25E, V31I, K34R, L45V, F100Y, L101I, T112V, T124A, T125A, K136Q, I141V, V201I, L234I, D278A S283G 
ZAKARPM085 ZAKARPM085 None    D25E, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, A265V, D278A S283G 
ZAKARPM087 ZAKARPM087 None    D25E, V31I, I72V, I84M, L101I, T112V, S119T, T124A, T125A, K136Q, V201I, Q216R, T218I, K219Q, L234I, R269K, D278A S283G 
ZAKARPM090 ZAKARPM090 None    K14R, D25E, V31I, I60V, L101I, T112I, T124A, T125A, I135V, K136Q, V201I, T218I, K219Q, L234I, R269K, D278A S283G, D288N 
ZAKARPM092 ZAKARPM092 None    D6E, E10D, D25E, V31I, F100Y, L101I, T112V, S119T, T124A, T125A, K136Q, V201I, L234I, I251L, N254K, S255G, A265V, R269K, D278A S283G 
ZAKARPM099 ZAKARPM099 None    S17N, V31I, M50I, I72V, F100Y, L101I, T124A, T125A, K136Q, G163E, I182V, V201I, Y227F, L234V, S255G, R269K, D278A S283G 
ZAKARPM101 ZAKARPM101 None    E11D, K14R, S24N, D25E, V31I, M50I, A91T, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, L234I, D278A A282P, S283G, R284G 
ZAKARPM104 ZAKARPM104 None    D25E, V31I, L74I, T112V, T124A, T125A, K136Q, D167E, V201I, T218I, L234V, D270N, D278A R224Q, S283G, R284G 
ZAKARPM107 ZAKARPM107 None    K14R, S24N, D25E, I72V, L101I, T112V, T122I, T124A, T125A, K136Q, D167E, V201I, L234I S283G 
ZAKARPM108 ZAKARPM108 None    E11D, S17T, D25E, V31I, V37I, I84M, F100Y, L101I, G106A, T112V, T125A, K136Q, V201I, K211R, T218I, L234I, R269K, D278A S283G 
ZAKARPM114 ZAKARPM114 None    V31I, M50I, I72V, T112V, T124N, K136Q, V201I, T206S, T218I, L234I, A265V, D278N S283G 
ZAKARPM115 ZAKARPM115 None    D6E, K14R, D25E, V31I, L101I, T112V, S119T, K136Q, V201I, T218I, L234I, A265V, D278A S283G 
ZAKARPM117 ZAKARPM117 None    K14R, K34R, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I S283G 
ZAKARPM129 ZAKARPM129 None    K14R, D25E, V31I, M50T, L101I, K111R, T112V, T125A, K136Q, V201I, T206S, I208L, Q221K, L234I S283G 
ZAKARPM131 ZAKARPM131 None    K14R, D25E, L45Q, I72V, F100Y, L101I, K111T, T112V, T124A, T125A, K136Q, V201I, T218L, I220V, L234I, D278A S283G 
ZAKARPM141 ZAKARPM141 None    K7R, K14R, D25E, V31I, F100Y, L101I, T112V, S119P, T124A, T125A, K136Q, V201I, T206S, T218I, L234I, I251L, R269K, D278A S283G 
ZAKARPM143 ZAKARPM143 None    D25E, V31I, M50T, L101I, T112V, T124A, T125V, K136Q, D167E, V201I, K215N, T218I, L234I, S255G, R269K, D278A S283G 
ZAKARPM148 ZAKARPM148 None    D6E, E11D, E13D, K14R, S24N, D25E, V31I, M50T, L101V, T112V, T124G, T125P, K136Q, V201I, T206S, T218I, K219Q, L234I, D278A S283G, R284G 
ZAKARPM149 ZAKARPM149 None    K14R, V31I, I84M, L101I, T112V, S119A, T124A, T125A, I135V, K136Q, K173R, V201I, T206S, T218I, K219Q, L234I, D278A S283G 
ZAKARPM157 ZAKARPM157 None    K14R, D25E, V31I, I60V, I84M, L101I, T112V, T124A, T125A, K136T, Y194C, V201I, K211Q, T218I, L234I, S255N, I268L, D270H, D278A  
ZAKARPM167 ZAKARPM167 None    D25E, M50T, I72V, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, K219Q, L234I, D278A S283G 
ZAKARPM170 ZAKARPM170 None    S24N, D25E, V31I, M50I, F100Y, L101I, T112V, T125A, K136Q, G163E, V201I, T218I, L234I, D278A S283G 
ZAKARPM187 ZAKARPM187 None    K14R, D25E, V31I, I72V, F100Y, L101I, T112V, T124A, T125A, V201I, T206S, T218L, K219N, N222K, L234I, A265V, R269K, D278A V281M, S283G 
ZAKARPM202 ZAKARPM202 None    E11D, S17T, M50I, L101I, T112V, G193D, V201I, T218I, L234I, A265V, R269K, D278A S283G 
ZAKARPM203 ZAKARPM203 None    E11D, S17T, M50I, L101I, T112V, G193D, V201I, T218I, L234I, A265V, R269K, D278A S283G 
ZAKARPM204 ZAKARPM204 None    E11D, D25E, V31I, M50T, L101I, T112V, T124A, T125A, K136Q, D167E, K173R, V201I, D207N, K211T, T218I, K219Q, L234I, D278A S283G 
ZAKARPM205 ZAKARPM205 None    E11D, S24N, D25E, V31I, L101I, T112V, T125V, K136Q, G163E, V201I, K211R, T218I, K219Q, L234I, D278A S283G 
ZAKARPM212 ZAKARPM212 None    D25E, V31I, L101I, T112V, T124N, T125A, K188R, V201I, T218I, L234I, D253E, S255G, A265V, R269K, D278A S283G 
ZAKARPM217 ZAKARPM217 None    K14R, S24N, D25E, V31I, M50I, F100Y, L101I, T112V, T125A, K136Q, V201I, T206S, L234I, D278A S283G, R284G 
ZAKARPM225 ZAKARPM225 None    D25E, V31I, M50I, F100Y, L101I, T112V, I113L, S119T, T124A, T125A, K136Q, V201I, T206S, I220V, L234I, R269K, D278A S283G 
ZAKARPM228 ZAKARPM228 None    V31I, M50T, F100Y, L101I, K111R, T112I, T124A, T125A, K136Q, G193E, V201I, T206S, I217V, L234I, D278A S283G 
ZAKARPM237 ZAKARPM237 None    E11D, S17N, S24D, D25E, V31I, F100Y, L101I, T112V, T124A, T125A, K136R, F181L, V201I, L234I, A265V, D278A S283G 
ZALTHPM008 ZALTHPM008 None    D25E, V31I, M50I, L101I, T112V, T124N, T125A, K136Q, D167E, V201I, T206S, L234I, R269K, D278A S283D, D286N 
ZALTHPM009 ZALTHPM009 None    D6E, D25E, V31I, M50I, F100Y, L101I, T112V, T124N, T125A, D167E, K188R, Y194C, V201I, K211T, Y227F, L234I, A265V, D278A S283G 
ZALTHPM012 ZALTHPM012 None    K14R, D25E, V31I, L45Q, I72V, F100Y, L101I, T112V, T125P, K136Q, S195C, V201I, K211R, L234I, D278A S283G 
ZALTHPM015 ZALTHPM015 None    K14R, D25E, V31I, M50I, I72V, I84M, L101I, T124A, T125A, K136Q, G163E, V201I, T206S, Y227F, L234I, D278A S283G 
ZALTHPM016 ZALTHPM016 None    E11D, S24N, D25E, V31I, M50I, L101I, T112V, S119P, T125A, K136Q, V201I, I208L, T218I, L234I, S255G S283G 
ZALTHPM017 ZALTHPM017 None    D6E, D25E, L45Q, M50I, F100Y, L101I, T112V, T125A, K136Q, V201I, T218L, K219Q, L234I, D278A S283G, D286N 
ZALTHPM024 ZALTHPM024 None    E11D, S24N, D25E, V31I, M50I, L74I, L101I, T112V, T124A, T125A, K136Q, V201I, T206S, T218I, L234I, A265V, R269K, D278A S283G, D286N 
ZALTHPM028 ZALTHPM028 None    K14R, S24N, D25E, I84M, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, L234I, D278A S283G, R284G 
ZALTHPM032 ZALTHPM032 None    K14R, D25E, K34R, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, L234I, D270E, D278A S283G 
ZALTHPM036 ZALTHPM036 None    S17N, D25E, V31I, I72V, L74I, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, R269K, D278A S283G 
ZALTHPM051 ZALTHPM051 None    K14R, D25E, V31I, F100Y, L101I, T112I, S119P, T124A, T125A, K136Q, V201I, T206S, K215N, T218I, L234I, R269K, D278A S283G, R284G, E287A 
ZALTHPM057 ZALTHPM057 None    K14R, D25E, V31I, K34R, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, D278A S283G 
ZALTHPM058 ZALTHPM058 None    E11D, S17N, S24D, D25E, V31I, L101I, T112V, T124S, T125A, K136Q, V165I, V201I, Q216K, T218I, K219Q, L234I, N254K, A265V, R269K, D278A S283G 
ZALTHPM062 ZALTHPM062 None    D6E, S17N, D25E, L101I, T112I, T124N, T125A, K136Q, V201I, T218I, Q221R, L234I, A265V, D278A S283G 
ZALTHPM072 ZALTHPM072 None    K14R, D25E, V31I, I72V, F100Y, L101I, K111R, T112V, T124A, T125A, K136Q, V201I, L234I S283G 
ZALTHPM081 ZALTHPM081 None    D25E, V31I, M50I, I72V, F100Y, L101I, T112V, S119P, T125A, K136Q, V201I, D207N, T218I, L234I, A265V, R269K, D278A K211E, S283G 
ZALTHPM086 ZALTHPM086 None    S17N, K34R, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, K211R, T218I, K219Q, L234I, Q274K  
ZALTHPM097 ZALTHPM097 None    D6E, E10D, D25E, V31I, M50T, I60V, I72V, I84M, A91G, L101I, T112V, T124G, T125A, K136Q, V201I, T218I, K219Q, L234I, R269K, D278A S283G, D286N 
ZALTHPM107 ZALTHPM107 None    D25E, V31I, K34R, M50I, I72V, I84M, E96D, F100Y, L101I, T112V, S119T, T124A, T125A, K136Q, V201I, T218I, L234I, A265V, D278A S283G 
ZALTHPM114 ZALTHPM114 None    E10D, V31I, S39C, L45Q, I60M, I84M, K111Q, T124A, T125A, G163T, T218I, L234I, D278A S283G, R284G, D286N