<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Chen (2016)
Title Fast Dissemination of New HIV-1 CRF02/A1 Recombinants in Pakistan.
Citation PLoS ONE
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 34
NumPts 34
Subtype A, CRF02_AG, C


Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
PK001 PK001 None None   E6D, V21I, V35T, K43R, V60I, K122E, D123N, S162C, E169D, K173S, Q174K, D177E, V179T, T200A, I202V, Q207E, R211K, V245M, D250E, T286A, E291D, I293V, G335D, R356K, M357R, G359A, T369V, I375V, T386A, K390R, K395R, E396D, A400T, T403M, E404D, E413D, E432D, V435I, N447S, Q480H, H483Y, L491S, K512R, Q524K, K527A, E529D, A534S, A554S A376M 
PK002 PK002 None None   V35T, V60I, K122E, D123N, I135T, E138A, S162C, E169D, K173S, Q174K, D177E, V179T, I202V, Q207E, V245E, D250E, L283I, T286A, E291D, I293V, P294T, E312D, G335D, F346Y, R356K, M357R, G359A, A371V, Q373H, I375V, T377M, T386A, K390R, A400I, T403M, E404D, E432D, V435I, D460N, S468P, D471E, T477A, Q480H, K512R, S519N, Q524K, L525M, K527E, E529D, A534S, A554S A376M 
PK003 PK003 None None   V21I, V35T, E36D, T39A, V60I, D121H, K122E, I135L, S162A, K173A, Q174R, D177E, Q207E, V245Q, A272P, V276I, T286A, E291D, I293V, P294T, L295M, K311R, S322T, I326V, G335D, R356K, M357R, G359S, A371V, I375V, T377M, K390R, T403M, T470I, D471E, Q480H, L491S, K512R, S519N, Q524R, K527G, E529D, A534S, A554S, V559I C280S 
PK004 PK004 None None   E6D, V35T, K122E, D123N, I135T, E138A, S162C, E169D, K173A, Q174K, D177E, V179I, I202V, Q207E, R211K, F214L, V245Q, T286A, E291D, V292I, I293V, P294T, E312D, S322A, I326V, G335D, R356K, M357R, G359T, A371V, I375V, T377M, K390R, A400T, T403M, E404D, E432D, V435I, R461K, L469I, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554S A376M 
PK006 PK006 None None   V21I, V35T, E36D, V60I, D121H, K122E, I135V, S162A, K173A, Q174R, D177E, Q207E, V245Q, K249Q, V276I, T286A, E291D, V292I, I293V, P294T, L295M, S322T, I326V, G335D, R356K, M357R, G359S, A371V, I375V, A376S, T377M, K390R, T403M, E432D, V435I, S468T, D471E, Q480H, L491S, K512R, E516G, Q524E, K527R, E529D, A534S, A554S, V559I C280S 
PK007 PK007 None None   E6D, V21I, K32R, V35T, V60I, K122A, I135V, E138A, T139A, S162C, K173A, Q174K, D177E, V179I, I202V, Q207E, R211K, V245E, D250E, K277R, T286A, E291D, I293V, P294T, E312D, G335D, F346L, R356K, M357R, G359A, A371V, T377M, K390R, A400I, T403M, E404D, V435I, N447S, R461K, V467I, S468T, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527E, E529D, K530R, A534S, A554S, K558R  
PK008 PK008 None None   E6D, V21I, V35T, V60I, D121H, K122E, I135T, E138A, S162C, K173A, Q174K, D177E, T200A, Q207N, V245K, D250E, T286A, A288S, E291D, I293V, P294T, S322T, G335D, R356K, M357R, G359T, T369A, A371T, I375V, T377M, T386I, K390R, A400T, T403M, E404D, V435I, S468T, D471E, Q480H, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554S  
PK009 PK009 None None   V35T, T39E, S48T, V60I, K122E, D123S, I135T, K173A, D177E, T200A, Q207E, V245Q, A272P, K277R, E291D, V292I, I293V, P294Q, I326V, Q334N, G335D, R356K, G359T, T377Q, K390R, K395R, A400T, E404D, E432D, V435A, L452M, L469I, T470S, D471E, H483Q, L491S, S519N, K527R, K530R, A534S, A554S, K558R  
PK011 PK011 None None M184I G190R E6K, V21I, V35T, E36D, V60I, V90I, D121H, I135T, S162A, K173A, Q174A, D177E, G196R, T200A, E204K, R206K, Q207N, R211K, M230I, V245Q, V276I, T286A, E291D, V292I, I293V, P294T, L295M, E308K, S322T, I326V, G333R, G335D, R356K, M357K, R358K, G359S, K366R, I375V, T377V, V381I, K390R, T403I, G436K, R448K, D471E, Q480H, G490E, L491S, K512R, S519N, Q524N, K527R, E529D, A534S, D549N, A554N, V559I M16I, M41I, G45R, G51K, R72K, G93R, G112R, G141E, G152R, G155R, G213R, G231R, G262R, C280S, E305K, G316K, G352R, G384R, G444K, G453K, G456R, G462R, G504R, G541K, G543K, G544R, G555R 
PK012 PK012 None None   V21I, V35T, V60I, K122E, D123N, I135T, E138A, S162C, E169D, K173A, Q174K, D177E, V179I, I202V, Q207E, V245K, D250E, T286A, E291D, I293V, E312D, G335D, R356K, M357R, R358K, G359A, A371V, I375V, T377M, T386A, A400T, T403M, E404D, Y405H, E432D, V435I, V467I, S468T, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527E, E529D, A534S, A554S A376M 
PK013 PK013 None None   E6D, V21I, V35T, T39A, V60I, K122E, D123N, I135T, E138A, S162C, E169D, K173A, Q174K, D177E, V179I, I202V, Q207E, V245K, D250E, T286A, E291D, I293V, E312D, G335D, R356K, M357R, G359A, I375V, T377M, T386A, K390R, A400T, T403M, E404D, E432D, V435I, V467I, S468T, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527T, E529D, A534S, A554S, I556V A376M 
PK014 PK014 None None   E6D, K11R, V21I, V35T, K49R, V60I, K122E, D123N, I135T, E138A, S162C, E169A, K173S, Q174K, D177E, V179I, I202V, Q207E, R211K, V245Q, D250E, T286A, A288S, E291D, I293V, P294S, E312D, V314M, G335D, R356K, M357R, G359A, A360T, A371V, I375V, A376I, T386A, A400T, T403M, E404D, E432D, V435T, S468T, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, K527R, E529N, A534S, A554S  
PK015 PK015 None None   E6ED, K20R, V21I, V35T, V60I, K122E, D123N, I135T, E138A, S162C, E169D, K173S, Q174K, D177E, V179I, I202V, Q207E, V245Q, E248D, D250E, A272T, E291D, I293V, E300Q, E312N, V317T, G335D, R356K, M357R, G359A, T369S, A371V, I375V, T386A, K390R, A400I, T403A, E404D, E432D, V435I, S468T, D471E, Q480H, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554S, K558R A376M 
PK016 PK016 None None   E6D, V21I, V35T, T39M, V60I, K122E, D123N, I135T, E138A, S162C, K173L, Q174K, D177E, V179I, I202V, Q207E, R211K, V245Q, D250E, T286A, E291D, I293V, P294T, G335D, R356K, M357R, G359T, A371V, I375V, T386A, K390R, T403M, E404D, E432D, V435I, R461K, T470A, D471E, H483Y, L491S, K512R, S519N, Q520R, Q524K, K527E, E529D, A534S, A554S  
PK017 PK017 None None   E6D, V21I, V35T, T39M, V60I, K122E, D123N, I135V, E138A, S162C, K173L, Q174K, V179I, I202V, Q207E, R211K, V245Q, D250E, T286A, E291D, I293V, G335D, R356K, M357R, G359T, I375V, K390R, T403M, E404D, E432D, V435I, K465R, V466I, T470A, D471E, Q480H, H483Y, L491S, K512R, S519N, Q520L, Q524K, K527A, E529D, A534S, A554S, I556V  
PK018 PK018 None None   E6D, V21I, V35T, T39M, V60I, K102N, D123N, I135V, E138A, S162Y, K173A, Q174K, D177E, V179I, I202V, Q207E, R211K, V245Q, D250E, I257V, K277R, T286A, E291D, I293V, P294T, I326V, Q334E, G335D, P345Q, R356K, M357R, G359T, A371V, I375V, T386A, K390R, T403M, E404D, E432D, V435I, K465R, T470A, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527A, E529D, A534S, A554S  
PK019 PK019 None None   V21I, V35T, T39L, V60I, I135V, S162A, K173A, Q174K, D177E, T200A, Q207E, V245Q, V276T, T286A, A288G, E291D, V292I, I293V, P294T, L295M, S322T, I326V, G335D, R356K, M357R, G359S, V365I, T369A, I375V, T377L, K390R, T403M, S468T, D471E, Q480H, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554N, V559I C280S 
PK020 PK020 None None   I31V, V35T, T39V, V60I, K122E, D123S, K173V, Q174K, D177E, V179I, Q207T, R211N, V245Q, D250E, S251N, A272P, L283I, E291D, V292I, I293V, P294T, E312D, V317A, S322A, G335D, R356K, M357R, G359A, T369A, A371V, I375V, A376V, T377M, I382V, A400T, T403R, E404D, E432D, V435A, R461K, D471E, Q480H, H483Y, L491S, K512R, S515L, E516D, S519N, Q520L, Q524K, K527E, E529D, A534S, A554T  
PK021 PK021 None None   E6D, V21I, V35T, T39A, K49R, V60I, K122E, D123N, I135T, E138A, I142V, S162C, E169D, K173S, Q174K, D177E, V179I, I202V, Q207E, R211K, V245Q, D250E, T286A, A288S, E291D, I293V, E312D, G335D, R356K, M357R, G359A, A371V, I375V, K390R, A400T, T403M, E404D, E432D, V435T, S468T, D471E, Q480H, L491S, K512R, S519N, Q524K, K527T, E529D, A534S, A554S A376M 
PK023 PK023 None None   V21I, V35T, T39M, V60I, K122E, D123N, I135V, S162A, K173A, Q174K, D177E, I202V, Q207E, V245Q, T286A, E291D, P294Q, V317A, G335D, R356K, M357R, G359A, T369V, I375V, T377M, T386A, K390R, A400T, T403M, E404D, E432D, V435I, S468T, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524E, E529D, A534S, A554S A376M, G490R 
PK024 PK024 None None   V21I, V35T, V60I, I135V, S162A, K173A, Q174K, D177E, T200A, Q207E, V245Q, V276I, T286A, E291D, V292I, I293V, P294I, L295M, S322A, I326V, G335D, R356K, M357R, G359S, K366R, A371V, I375V, A376T, T377L, T403M, T409X, W410X, I411X, S468T, D471E, Q480H, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554N, K558R, V559I C280S 
PK025 PK025 None None   V21I, V35T, E36D, V60I, D121Y, K122E, I135T, S162A, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, K275Q, V276I, T286A, E291D, V292I, I293V, P294T, L295M, S322T, I326V, G335D, R356K, M357R, G359S, T369A, K374R, I375V, T377M, K390R, T403M, S468P, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554N, V559I C280S 
PK026 PK026 None None   E6D, V21I, V35T, V60I, K122E, D123N, I135T, E138A, S162C, E169D, K173A, Q174K, D177E, V179T, I202V, Q207E, R211K, V245E, D250E, A272G, T286A, E291D, I293V, E312N, G335D, R356K, M357R, G359A, T369A, K374R, I375V, V381I, T386A, K388R, K390R, A400T, T403M, E404D, E432D, V435I, S468T, D471E, Q480H, L491S, K512R, S519N, Q524E, K527T, E529D, A534S, Q547K, A554S A376M 
PK027 PK027 None None   E6D, V21I, V35T, V60I, D123N, I135T, E138A, S162C, E169D, K173A, Q174K, D177E, V179T, I202V, Q207G, R211K, V245K, D250E, A272G, T286A, E291D, I293V, E312N, I326V, G335D, R356K, M357R, G359A, T369A, A371V, I375V, V381I, T386A, K388R, K390R, A400T, T403I, E404D, E432D, V435I, R461K, S468T, D471E, Q480H, L491S, K512R, S519N, Q524E, E529D, A534S, A554S, K558R A376M 
PK030 PK030 None None   E6D, V21I, K32R, V35T, T39K, V60I, K122A, S162C, K173A, Q174K, D177E, V179I, T200A, I202V, Q207K, R211K, V245E, D250E, K277R, T286A, E291D, I293V, P294T, G335D, R356K, M357R, G359T, A371V, T377N, K390R, A400I, T403M, E404D, E432D, V435I, N447S, R461K, S468T, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527E, E529D, K530R, A534S, A554S  
PK031 PK031 None None   E6D, V21I, K32R, V35T, T39K, V60I, K122A, E138A, S162C, K173L, Q174K, V179I, T200A, I202V, Q207G, D237G, V245E, D250E, K277R, T286A, E291D, I293V, P294T, V317A, G335D, R356K, M357R, G359T, A371V, T377N, K390R, A400I, T403R, E404D, E432D, V435I, N447S, R461K, S468T, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527E, E529D, K530R, A534S, A554S  
PK032 PK032 None None   V21I, V35T, E36D, I47X, V60I, V90I, I135V, S162A, K173A, Q174K, D177E, T200A, Q207D, V245Q, V276I, A288V, E291D, V292I, I293V, P294T, L295M, S322T, G335D, R356K, M357R, G359S, T369A, I375V, T377M, K390R, E399D, T403M, D471E, Q480H, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554S, V559I C280S 
PK033 PK033 None None   E6D, V21I, V35T, V60I, K122E, D123N, I135T, E138A, S162A, K173A, Q174K, D177E, V179I, I202V, Q207E, V245Q, D250E, T286A, E291D, S322T, I326V, G335D, R356K, M357R, G359A, I375V, T377M, T386A, K390R, T397A, A400T, T403M, E404D, E432D, V435I, S468T, D471E, Q480H, L491S, K512R, E516D, S519N, Q524K, K527G, E529D, V531I, A534S, A554S, K558R A376M 
PK034 PK034 None None   E6D, V21I, K32R, V35T, T39A, V60I, D123N, I135T, E138A, T139A, S162C, K173S, Q174K, D177E, V179I, I202V, Q207E, V245K, D250E, A272T, T286A, E291D, I293V, E312D, G335D, R356K, M357R, G359A, A371V, T377R, K390R, A400I, T403M, E404D, V435I, N447S, R461K, S468T, D471E, Q480H, H483Y, L491S, A508T, K512R, S519N, Q524K, K527R, E529D, K530R, A534S, A554S  
PK035 PK035 None None   V21I, K32I, V35T, E36D, V60I, D121H, K122E, E138Q, S162A, K173A, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, V276I, T286A, V292I, I293V, P294T, L295M, S322T, I326V, G335D, R356K, M357R, G359S, K366R, T369A, A371V, I375V, A376T, T377L, K390R, T403M, K424R, D471E, Q480H, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554N, V559I G273R, C280S 
PK036 PK036 None None   E6D, V21I, V35T, V60I, K104R, K122E, D123N, I135T, E138A, S162H, K173S, Q174K, D177E, V179I, I202V, Q207E, V245K, D250E, A272P, E291D, I293V, E312D, G335D, R356K, M357R, G359A, A371L, I375V, I380V, K390R, I393L, A400T, E404D, E432D, V435I, S468T, D471E, Q480H, L491S, K512R, S519N, Q524E, K527T, E529D, A534S, V548I, A554S A376M 
PK038 PK038 None None   V21I, V35T, E36D, V60I, D121H, K122E, I135V, S162A, K173A, Q174K, D177E, T200A, Q207E, R211G, V245Q, V276I, T286A, E291D, V292I, I293V, P294T, L295M, S322T, G335D, R356K, M357R, G359S, A371V, I375V, T377V, K390R, T403M, D471E, Q480H, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554S, V559I C280S 
PK039 PK039 None None   V21I, V35T, V60I, I135V, S162A, K173A, Q174K, D177E, T200A, Q207E, V245Q, V276I, T286A, E291D, V292I, I293V, P294T, L295M, S322T, I326V, G335D, K347R, R356K, M357R, G359S, V365I, I375V, T377L, K390R, T403M, K431R, S468T, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527G, E529D, A534S, A554K, V559I C280S 
PK040 PK040 None None   E6D, V35T, V60I, D121Y, K122E, S162A, K173A, Q174K, D177E, T200A, I202V, Q207E, V245E, D250E, A272G, T286A, E291D, I293V, P294T, E312D, G335D, R356K, M357R, G359A, A371V, A376G, T377M, K390R, A400I, T403M, E404N, E432D, V435I, N447S, R461K, D471E, Q480H, H483Y, L491S, K512R, S519N, Q524K, K527A, E529D, K530R, A534S, A554S