Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Villabona-Arenas (2015)
Title HIV-1 group O infection in Cameroon from 2006 to 2013: Prevalence, genetic diversity, evolution and public health challenges.
Citation Infect Genet Evol
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup O
SelectedType Clinical
NumIsolates 36
NumPts 36
Host Human

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
03-096-A66 03-096-A66 Unknown    K7Q, E11D, M22L, N27G, V37I, S39N, Q44H, L45T, M50I, G59E, I60V, L63I, L74I, Y83F, G106A, T112X, S119P, T124A, V126M, A133T, G134N, Q137H, V150A, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, N222K, L234I, K240Q, N254K, S255G, D270N, D278X, C280S, V281M, R284G D41P, D207H, T218F, R224Q 
2778-07 2778-07 Unknown    K7Q, E11D, M22L, N27G, V37I, S39N, Q44H, L45I, M50I, G59E, I60V, L63I, K71Q, I72V, L74I, Y83F, G106A, T112V, S119P, T122I, T124A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, T206S, I208L, K211T, L234I, K240Q, N254K, S255G, D270N, D278T, C280S, V281M, R284G D41P, D207Q, T218F, R224Q 
C1-002-ZAXA C1-002-ZAXA Unknown    K7Q, E11D, M22L, N27G, V37I, S39N, Q44H, L45T, M50I, G59E, I60V, L63I, L74I, Y83F, G106A, T112I, S119P, T124A, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, N222K, L234I, K240Q, N254K, S255G, D270H, D278T, C280S, V281M, R284G D41P, D207Q, T218F, R224Q 
C1-1036-NDAM C1-1036-NDAM Unknown    D3E, K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, K46R, G59E, I60V, L63I, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, T218S, L234I, K240Q, N254K, S255G, D270E, D278T, C280S, V281M D41P, D207H 
C1-1066-AGBE C1-1066-AGBE Unknown    D3E, K7Q, E11D, M22L, N27G, V37I, Q44H, L45T, M50I, C56Y, G59E, I60V, L63X, L68M, I72V, L74I, Y83F, G106A, T112V, S119P, T122TI, T124A, V126M, G134N, K136R, Q137H, S153A, K160S, G163Q, K173R, I182V, Y194C, S195T, I200L, V201I, I204L, T206S, K211T, T218L, Q221H, N222K, L234V, K240Q, N254K, S255G, I268L, D270H, D278A, C280S, V281M, R284G D41P, D207H, R224Q 
C1-1912-MBEM C1-1912-MBEM Unknown    K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, G59E, I60V, L63I, L74I, Y83F, G106A, T112V, S119P, T122TI, T124A, V126M, G134N, K136Q, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, T206S, K211T, L234I, K240Q, N254K, S255G, D270N, D278T, C280S, V281M D41P, D207H, T218F, R224Q 
C1-1922-DOTH C1-1922-DOTH Unknown    K7Q, E11D, M22L, D25E, F26Y, N27G, V37I, S39N, Q44H, L45T, M50I, G59E, I60V, L63I, L68T, L74I, Y83F, G106A, T112I, S119P, T124A, T125S, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, T218L, N222K, L234I, K240Q, N254K, S255G, D270H, D278T, C280S, V281M, R284G D41P, D207Q, R224Q 
C1-2265-BIPR C1-2265-BIPR Unknown   L68V K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, M50I, C56Y, G59E, I60V, L63I, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163Q, I182V, F185FY, S195T, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, I268L, D270H, D278T, D279N, C280S, V281M, R284G D41P, D207Q 
C1-251-NKPI C1-251-NKPI Unknown    K7Q, E11D, M22L, N27G, V37I, S39N, Q44H, L45I, M50T, C56Y, G59E, I60V, L63I, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, K173R, I182V, I191L, S195T, V201I, I204L, T206S, K211T, N222K, L234I, K240Q, N254K, S255G, D270H, C280S, R284G D41P, D207Q, T218F, R224Q, D278P 
C1-706-LEHE C1-706-LEHE Unknown    K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, K46R, M50I, G59E, I60V, L63M, L74I, Y83F, G106A, T112I, S119P, T124A, T125A, V126M, A133T, K136Q, Q137H, S153A, K160S, I182V, G193R, S195T, I200L, V201I, I204L, T206S, K211T, T218S, L234I, K240Q, N254K, S255G, I268L, D278A, V281M, R284G D41P, D207Q 
C1-973-ETEM C1-973-ETEM Unknown    K7Q, E11D, M22L, N27G, V31VI, V37I, S39N, Q44H, L45I, M50X, C56Y, G59E, I60V, L63I, L74I, Y83F, T93S, G106A, T112V, S119P, T124A, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, I182V, I191M, S195T, V201I, I204L, T206S, K211T, N222K, L234I, K240Q, N254K, S255G, D270H, D278T, C280S, V281M, R284G D41P, D207Q, T218F, R224Q 
CM1070 CM1070 Unknown    D3E, K7Q, E11D, M22L, D25E, N27G, V37I, S39N, Q44H, L45I, K46R, A49P, M50I, I60V, L63M, L74I, Y83F, T93S, G106A, T112V, S119P, T124A, T125TA, V126VM, A133T, G134N, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, N222K, L234I, K240Q, N254K, S255G, D278S, C280S, R284G D41P, D207Q, T218F 
CM2080 CM2080 Unknown    K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, K46R, M50I, G59E, I60V, L63M, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, I200L, V201I, I204L, I208L, K211T, T218L, N222K, L234V, K240Q, N254K, S255G, C280S, V281M, R284G, D286A D41P, G192GE, D207H, R224Q, D229DN, D278P 
HJ100 HJ100 Unknown    E11D, R20K, M22L, S24G, N27G, V37I, S39N, Q44H, L45I, M50I, G59E, I60V, L63I, I72V, L74I, Y83F, G106A, T112I, S119P, T124A, V126M, A133T, G134N, K136T, Q137H, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, N222K, L234I, K240Q, N254K, S255G, D270H, D278T, C280S, R284G D41P, D207Q, T218F, R224Q 
HJ1230 HJ1230 Unknown   L68V K7Q, E11D, M22L, N27G, V37I, S39N, Q44H, L45I, K46R, A49P, M50I, G59E, I60V, L63M, I72V, L74I, Y83F, G106A, T112I, S119P, T124A, V126M, G134D, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, T218L, Q221H, N222K, L234I, K240Q, N254K, S255G, D278T, C280S, V281M, R284G D41P, D207H 
HJ1322 HJ1322 Unknown    K7Q, E11D, E13A, M22L, D25E, N27G, V37I, S39N, Q44H, L45T, M50I, G59E, I60V, L63I, I72IV, L74I, Y83F, E96D, G106A, T112V, S119P, T122TI, T124A, V126X, A133T, G134N, K136KR, Q137H, S153A, K160S, G163Q, S195T, V201I, I204L, T206S, K211T, N222K, L234I, K240Q, N254K, S255G, D270H, K273Q, D278A, C280S, V281M, R284G D41P, D207Q, T218F, R224Q 
HJ1357 HJ1357 Unknown    K7Q, E11D, M22L, N27G, L28I, V37I, Q44H, L45I, M50I, G59E, I60V, L63M, I72IV, L74I, Y83F, A91AS, G106S, V110I, T112V, I113L, S119P, V126M, A133T, G134N, K136KR, Q137H, S153A, K160S, G163Q, K173R, I182V, Y194C, S195T, I200L, V201I, I204L, T206S, K211T, T218L, N222K, L234I, K240Q, N254K, S255G, I268L, R269RK, D278A, C280S, V281M, R284G D41P, D207H 
HJ162 HJ162 Unknown    K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, G59E, I60V, L63I, L74I, Y83F, G106A, T112V, S119P, T124A, T125A, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, T218L, K219KQ, Q221QR, L234I, K240Q, N254K, S255G, D278T, C280S, V281M D41P, D207H, P261PS 
HJ2044 HJ2044 Unknown   L68V K7Q, E11D, R20K, M22L, D25E, N27G, V37I, Q44H, L45I, M50I, G59E, I60V, L63I, I72V, L74I, Y83F, G106A, T112I, S119P, T124A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G D41P, E85K, D207H 
HJ2734 HJ2734 Unknown    K7Q, E11D, M22L, N27G, V37I, S39N, Q44H, L45I, M50I, C56Y, G59E, I60V, L63M, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, T125A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163Q, I182V, I191M, S195T, V201L, I204L, T206S, K211T, N222K, L234I, K240Q, N254K, S255G, D270H, D278T, C280S, V281M, R284G L28LP, D41P, D207Q, T218F, R224Q 
HJ2764 HJ2764 Unknown    K7Q, E11D, M22L, N27G, V37I, S39N, Q44H, L45I, M50T, C56Y, G59E, I60V, L63I, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, A133T, G134N, K136R, Q137H, S153A, K160S, G163Q, I182V, I191M, S195T, V201I, I204L, T206S, K211T, N222K, L234I, K240Q, N254K, S255G, D270H, D278T, C280S, V281M, R284G D41P, D207Q, T218F, R224Q 
HJ367 HJ367 Unknown   L68LI K7Q, E11D, M22L, N27G, V37I, S39N, Q44H, L45I, M50T, C56CY, G59E, I60V, L63LI, I72IV, L74I, Y83F, A91AT, G106A, T112V, S119P, T124A, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, K173R, I182V, I191M, S195T, V201I, I204L, T206S, I208IM, K211T, N222K, L234I, K240Q, N254K, S255G, D270H, D278T, C280S, V281M, R284G D41P, D207Q, T218F, R224Q 
HJ736 HJ736 Unknown    K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, K46R, A49P, G59E, L63M, L74I, Y83F, G106A, T112I, S119P, T124A, V126M, A133T, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, I200L, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D256E, D278T, V281M, R284G D41P, D207Q 
M1-024-FOEM M1-024-FOEM Unknown    K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, K46R, D55N, G59E, I60V, L63M, L74I, Y83F, G106A, T112I, S119P, T124A, T125A, V126M, A133T, K136KQ, Q137H, S153A, K160S, I182V, G193R, Y194YC, S195T, I200L, V201I, I204L, T206S, K211T, T218S, N222K, L234I, K240Q, N254K, S255G, I268IV, R269RK, K273KQ, D278A, V281M, R284G D41P, D207Q 
M1-457-EDCY M1-457-EDCY Unknown    K7Q, E11D, M22L, N27G, V37I, S39N, Q44H, L45I, M50I, H51HR, G59E, I60V, L63I, L74I, V77A, Y83F, G106A, T112V, S119P, T124A, T125A, V126M, A133T, G134N, Q137H, S153A, K160S, G163E, D167E, I182V, S195T, V201I, I204L, T206S, K211T, N222K, L234I, K240Q, K244KR, N254K, S255G, D270H, D278T, C280S, V281M, R284G D41P, D207Q, T218F, R224Q 
MR140 MR140 Unknown   L68V K7Q, E11D, R20K, M22L, D25E, N27G, V37I, Q44H, L45I, G59E, I60V, L63I, I72V, L74I, Y83F, G106A, T112I, S119P, T124A, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, T206S, K211T, N222K, L234I, K240Q, N254K, S255G, D256E, D270H, D278T, C280S, V281M, R284G D41P, D207Q, T218F, R224Q 
SK6078 SK6078 Unknown   T97A K7Q, E11D, M22L, D25E, N27G, V37I, Q44H, L45I, M50I, G59E, I60V, L63M, I72V, L74I, Y83F, G106A, T112I, S119P, T124A, T125A, V126M, A133T, G134N, S153A, K160S, G163M, K173R, I182V, S195T, E198D, I200L, V201I, I204L, T206S, K211N, T218L, N222K, L234I, K240Q, N254K, S255G, I268L, D278T, C280S, V281M, R284G, D286A D41P, D207Q 
YD1431 YD1431 Unknown    K7Q, E11D, M22L, N27G, V37I, Q44H, L45I, K46R, G59E, I60V, L63M, L74I, Y83F, G106A, T112X, T124A, T125A, V126M, A133T, K136Q, S153A, K160S, G163T, I182V, G193R, S195T, I200L, V201I, I204L, T206S, K211T, T218S, L234I, K240Q, N254K, S255G, D278A, V281M, R284G D41P, D207Q 
YD1447 YD1447 Unknown   G140GR K7Q, E11D, E13Q, M22L, D25E, N27G, V37I, S39N, K42Q, Q44H, L45I, M50I, G59E, I60V, L63I, L68T, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, T206S, K211T, N222K, L234I, K240Q, N254K, S255G, D270H, D278N, C280S, V281M, R284G D41P, G82GR, D207H, T218F, R224Q 
YD1517 YD1517 Unknown    D3E, K7Q, E11D, R20K, M22L, D25E, N27G, V37I, Q44H, L45I, M50I, G59E, I60V, L63M, L74I, Y83F, G106A, T112V, S119P, T124A, T125A, V126M, A133T, G134N, K136Q, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D278T, C280S, V281M D41P, T97S, V165L, D207H 
YD207 YD207 Unknown    K7Q, E11D, R20K, M22L, D25E, N27G, V37I, Q44H, L45I, M50I, G59E, I60V, L63I, L68A, I72V, L74I, Y83F, G106A, T112I, S119P, T124A, T125A, V126VL, A133T, G134N, K136Q, Q137H, V150A, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, T218L, L234I, K240Q, N254K, S255G, D278T, C280S D41P, D207H 
YD593 YD593 Unknown    D3E, K7Q, E11D, R20RK, M22L, N27G, V37I, Q44H, L45I, G59E, L63M, I72V, L74I, Y83F, G106A, T112I, S119P, T124A, T125A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, E198D, I200L, V201I, I203IM, I204L, T206S, K211T, T218L, Q221H, N222K, L234I, K240Q, N254K, S255G, D256E, D278T, V281M, R284G D41P, D207Q 
YD594 YD594 Unknown    K7Q, E11D, R20K, M22L, N27G, V37I, Q44H, L45I, M50I, G59E, L63M, I72V, L74I, Y83F, G106A, T112I, S119P, T124A, T125A, V126M, A133T, G134N, K136Q, Q137H, S153A, K160S, G163Q, I182V, S195T, E198D, I200L, V201I, I203M, I204L, T206S, K211T, T218L, Q221H, N222K, L234I, K240Q, N254K, S255G, D256E, D278T, V281M, R284G D41P, D207Q 
YD603 YD603 Unknown    K7Q, E11D, E13D, M22L, N27G, V37I, Q44H, L45I, G59E, I60V, L63I, L74I, Y83F, G106A, T112V, S119P, T124A, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, I182V, S195T, V201I, I204L, T206S, K211T, T218L, K219Q, L234I, K240Q, N254K, S255G, D278T, C280S, V281M D41P, D207H 
YD656 YD656 Unknown    D3E, K7Q, E11D, R20K, M22L, N27G, V37I, Q44H, L45I, M50I, G59E, I60V, L63I, I72V, L74I, Y83F, G106A, T112V, S119P, T124A, T125N, V126M, A133T, G134N, Q137H, S153A, K160S, G163Q, K173R, I182V, S195T, V201I, I204L, A205T, K211T, T218L, L234I, K240Q, N254K, S255G, D278T, C280S, V281M, R284G D41P, D207H 
YD966 YD966 Unknown   L68V D3E, K7Q, E11D, R20K, M22L, S24G, N27G, V37I, Q44H, L45I, M50I, C56Y, G59E, I60V, L63M, I72V, L74I, Y83F, G106A, T112V, S119P, T125N, A133T, G134N, Q137H, S153A, K160S, G163Q, K173R, I182V, F185Y, R187K, K188R, S195T, V201I, I204L, A205T, K211T, T218L, L234I, K240Q, N254K, S255G, D278T, C280S, V281M, R284G D41P, D207H