<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Kityo (2017)
Title Pretreatment HIV drug resistance results in virological failure and accumulation of additional resistance mutations in Ugandan children.
Citation J Antimicrob Chemother
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 360
NumPts 198
Subtype A, D, B, C, G


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Page 1   from Isolate 1 to Isolate 100 from Total 360 Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
JCR001 JCR001m0 None None   K11T, K20R, V21I, V35T, T39M, E40D, V60I, K173S, D177E, V179I, T200K, I202V, Q207A, R211S, V245Q, E248D  
JCR002 JCR002m0 None None   V35T, T39A, K49R, V60I, K122E, D123S, I135T, K173S, D177E, V179I, T200A, Q207A, R211S, V245Q  
  JCR002m6 Unknown Unknown M184V  V35T, T39G, K122E, D123S, I135T, K173A, Q174K, D177E, V179I, T200A, Q207A, R211S  
  JCR002m12 Unknown Unknown L74V, M184V Y181C V35T, T39X, K49R, K122E, D123S, I135T, I142IT, K173A, Q174K, D177E, V179I, T200A, Q207A, R211S  
JCR003 JCR003m0 None None   K11T, V35T, K122E, D123N, K173S, T200A, Q207A, R211S, V245Q, E248D  
JCR004 JCR004m0 None None M41L, A62V, V75I  P4S, E6D, K11T, K20R, V21I, V35T, T39A, K122E, D123S, K173S, V179I, T200TA, I202V, Q207A, V245Q, E248D, A272P  
JCR005 JCR005m0 None None   V35T, E40D, K49R, I50IV, E53D, V60I, D121Y, K122E, D123E, D177E, I178M, G196K, Q197E, T200A, Q207E, E248D, A272P  
  JCR005m6 Unknown Unknown  K103N K20R, E28A, V35T, E40D, K49R, I50V, V60I, K101Q, D121H, K122E, D123E, D177E, G196K, Q197E, T200A, Q207E, R211K G51E, E53N 
  JCR005m12 Unknown Unknown M184V K103N K20R, E28A, V35T, E40D, K49R, E53D, V60I, K101Q, D121H, K122E, D123E, D177E, I178M, G196K, Q197E, T200A, Q207E, R211RK  
  JCR005m18 Unknown Unknown D67N, K70R, M184V K103N, P225H K20R, E28A, V35T, E40D, K49R, E53D, V60I, K101Q, D121H, K122E, D123E, I135T, D177E, I178M, G196K, Q197E, T200A, Q207E  
JCR006 JCR006m0 None None   E6D, V35T, K122E, D123S, I135T, K173A, Q174K, D177E, T200A, Q207A, R211D, V245Q, D250E  
JCR007 JCR007m0 None None D67DN, K70KR, M184MV, K219Q K103N K11X, K20R, E28EK, V35T, T39X, V60I, T69X, K122E, D123N, K173A, Q174K, D177E, V179X, T200A, I202V, Q207A, H208HY, R211X, T215X, L228X, V245Q, E248N, A272P  
  JCR007m6 Unknown Unknown M41L, D67N, T69D, K70R, M184V, L210W, T215F, K219Q K103N, Y188L K11T, K20R, E28K, K32I, V35T, T39K, V60I, K122E, D123N, K173A, Q174K, D177E, V179T, T200A, I202V, Q207A, H208Y, R211D, L228H  
  JCR007m12 Unknown Unknown M41L, D67N, K70R, V75M, M184V, L210W, T215F, K219Q K103N, Y188L K11T, K20R, E28K, K32I, V35T, T39K, V60I, T69E, I94IL, L109LI, K122E, D123N, K173A, Q174K, D177E, V179T, T200A, I202V, Q207A, H208Y, R211D, D218E, L228H  
JCR008 JCR008m0 None None   I5V, E6D, K11Q, V35T, K49R, V60I, K104R, D121Y, K122E, I135T, S162C, D177E, T200I, Q207E, R211K, A272P  
JCR009 JCR009m0 None None   E28K, K32E, V35T, V60I, D121H, K122E, D123S, S162A, D177E, T200I, Q207G, R211K, V245E, D250E, A272P, K277R  
JCR010 JCR010m0 None None   V35T, T39A, S48T, V60I, K122E, D177E, I178M, T200TA, I202V, Q207G, R211K, S251I, A272P, K277R  
JCR011 JCR011m0 None None M41L, M184V, L210W, T215Y Y181C E6D, V35T, E44D, V60I, V111I, K122E, I135L, K166R, D177E, I178M, V179I, E203K, Q207D, H208Y, R211K, H221Y, V245Q, D250E, A272P, K277R  
JCR012 JCR012m0 None None   K20R, V21I, V35T, V60I, K122E, D123N, K173T, D177E, V179I, I202V, Q207A, R211N, V245Q, E248D, Q278H  
JCR013 JCR013m0 None None  P236L K11T, V35T, T39A, K122E, D123G, K173S, Q174K, D177E, V179I, G196E, I202V, Q207A, R211S, F214L, V245E, D250E  
JCR014 JCR014m0 None None   V35T, T39M, E40D, K49R, V60I, D121Y, K122E, D123E, Q174R, D177E, I178M, Q207G, R211K, V245K, E248D, D250E, A272P, K277R, Q278H  
JCR015 JCR015m0 None None   E6D, V35T, T39A, E40D, K49R, V60I, K122E, D123N, I135V, I142L, K173S, Q174K, D177E, I178M, V179I, T200A, Q207A, R211S, A272P  
  JCR015m6 Unknown Unknown M184V  E6D, V35T, T39M, E40D, K49R, V60I, K122E, D123N, I135V, I142L, K173S, Q174K, D177E, I178M, V179I, T200A, Q207A, R211S  
JCR016 JCR016m0 None None   K11T, K20R, V21I, V35T, T39N, K122E, D123N, K173A, Q174K, D177X, V179I, T200A, I202V, Q207A, R211S, V245Q, D250E  
JCR017 JCR017m0 None None M184V K103N, P225H, K238T V35T, T39N, K122E, D123S, I135L, K173A, T200A, Q207A, R211K, V245Q, D250E, A272P, K275R  
  JCR017m6 Unknown Unknown M184V K103N, P225H, K238T V35T, T39N, K122E, D123S, I135IL, E138EG, K173A, I178IM, T200A, Q207A, R211K  
  JCR017m12 Unknown Unknown M184V K103N, P225H, K238T V35T, T39N, K122E, D123X, E138EG, K173A, I178M, T200A, Q207A, R211K, D237DN  
  JCR017m24 Unknown Unknown   V35T, T39N, K122E, D123S, K173A, T200A, Q207A, R211K  
JCR018 JCR018m0 None None   E6D, V35T, V60I, D121Y, K122E, D177E, Q207E, R211K, V245E, D250E, A272P  
  JCR018m48 Unknown Unknown M184V K103N, G190A E6D, V35T, V60I, D121Y, K122E, D177E, Q207E, L210M, R211K, D237DE  
JCR019 JCR019m0 None None   I5V, V35T, K49R, V60I, K102R, K104R, D121Y, K122E, D177E, T200I, Q207E, R211K, V245X, D250E  
JCR020 JCR020m0 None None   K20R, V35T, K122E, D123N, T139A, K173S, Q174K, D177E, V179I, T200A, I202V, Q207A, R211S, F214L, V245Q, E248D, D250S  
JCR021 JCR021m0 None None D67G, K70R, M184V, T215F, K219Q V108I, Y181C P4S, K11T, K20R, V21I, V35T, T39K, K46Q, K49R, T69N, K122E, D123N, I135T, Q145C, K173S, D177E, T200K, I202V, Q207A, L228H, D250E, A272P, K277R  
JCR022 JCR022m0 None None M184V G190A V35T, T39L, V60I, D121Y, K122E, I135V, D177E, I178M, V179I, Q197K, T200A, Q207G, R211K, D237E, V245K, D250E, S251N, A272P, I274V, V276T, K277R  
JCR023 JCR023m0 None None   K11T, K20R, V35T, T39R, K43E, V90I, V118I, K122E, D123S, I135V, S162G, K173T, Q174K, D177E, V179I, T200A, I202V, Q207A, R211S, F214L, V245Q, E248N  
JCR024 JCR024m0 None None M184V A98G, K103N, P225H V35T, E40D, K49R, V60I, D121H, K122E, I135T, S162A, N175H, D177E, I178M, T200M, K201I, Q207E, R211K, F214L, V245T, D250E, A272P, K277R  
JCR025 JCR025m0 None None   I5V, K11Q, V35T, V60I, K122E, D123S, I135T, K173S, Q174R, D177E, Q207E, V245Q, A272S, K277R  
JCR026 JCR026m0 None None M184V Y181C, G190A K11T, K20R, V21I, V35T, T39M, K122KE, D123N, I135T, K173S, D177E, V179I, I202V, Q207A, R211S, H221Y, V245T, E248D  
JCR027 JCR027m0 None None   E6K, V35T, T39A, V60I, K122E, D123S, I135T, I142V, K173A, Q174K, D177E, I178M, V179I, T200A, Q207A, R211S, V245K, D250E, A272T, K277KR  
JCR028 JCR028m0 None None   V8I, V35T, K49R, V60I, T69TI, K122E, D123N, I135T, K173S, Q174QR, V179I, T200A, Q207E, R211K, V245Q, D250E, V261I, K277R  
JCR029 JCR029m0 None None   V35T, E40ED, K49KR, V60I, D121C, K122E, D177E, I178M, T200R, Q207E, R211K, V245T, D250E, A272P, K277R  
JCR030 JCR030m0 None None   K20R, V35T, T39L, T69S, K122E, D123S, K173S, D177G, V179I, T200A, I202V, Q207A, R211S, V245Q, E248D, S251N, A272P  
  JCR030m12 Unknown Unknown M184V Y181C K20R, I31L, V35T, T39L, K49R, T69S, K101R, K122E, D123S, K173S, D177G, V179I, T200A, I202V, Q207A, R211S, H221Y  
  JCR030m18 Unknown Unknown M41L, M184V, L210W, T215F A98G, K103N, V108I K11R, V35T, V60I, S68G, K122E, D123S, I135T, T165I, K173S, Q174K, D177E, I178M, Q197K, T200E, Q207A, R211S, H221Y  
JCR031 JCR031m0 None None  Y181F K20R, V21I, V35T, T39E, G45E, V60I, K122E, D123N, K173S, D177E, Q207A, R211K, V245Q, E248D, D250E, S251C, A272P  
JCR034 JCR034m0 None None   V35T, T39K, K49R, V60I, S68N, D121Y, K122E, R125K, E138A, D177E, T200I, Q207G, R211K, I244V, V245T, D250E, A272P, K277R  
JCR035 JCR035m0 None None   K20R, V21I, V35T, T39K, V60I, V106I, K122E, D123N, K173S, D177E, T200A, I202V, Q207A, R211S, F214L, V245Q, E248N, A272P  
  JCR035m18 Unknown Unknown  K103N K20KR, V21I, K32KI, V35T, T39K, V106I, K122E, D123N, S162SN, T165TI, K173S, D177E, T200A, I202V, Q207A, R211S, F214L  
  JCR035m24 Unknown Unknown M184V K103N K20R, V21I, V35T, T39K, V106I, K122E, D123N, K173S, D177E, T200A, I202V, Q207A, R211S, F214L  
JCR036 JCR036m0 None None M184V  V35T, E36A, V60I, K101Q, K122E, D123S, S162C, D177E, G196K, Q197R, T200A, Q207E, V245T, D250E, S251D, A272P, K277R G93R 
JCR037 JCR037m0 None None   E6D, K11A, V35T, T39M, V60I, K104R, D121Y, K122E, D177E, I178M, T200I, Q207E, R211K, V245Q, P247T, D250E, A272P, K277R  
JCR038 JCR038m0 None None   V35T, E36ED, T39TA, E40ED, V60I, K122E, D123N, I135T, I142T, E169D, K173A, Q174K, D177E, I178L, V179I, T200A, Q207A, R211S, V245X, D250E, A272P  
JCR040 JCR040m0 None None   K11T, K20R, V35T, T39L, K122E, D123S, I135T, S162H, K173S, D177E, V179I, G196K, T200A, I202V, Q207A, R211S, V245Q, K275Q  
  JCR040m48 Unknown Unknown   K11T, K20R, V35T, T39L, K122E, D123S, I135T, S162H, K173S, D177E, V179I, G196K, T200A, I202V, Q207A, R211S  
JCR041 JCR041m0 None None   K11KT, V35T, T39K, K43Q, K122E, D123S, E138A, I142V, K166KR, K173S, V179I, T200A, I202V, Q207A, R211RK, V245Q, E248D, A272P, K275Q, V276I, K277R E29EK 
JCR042 JCR042m0 None None   E6A, K11T, V35T, E40D, K49R, V118I, K122E, D123N, E138A, I142V, K173V, Q174K, V179I, I202V, Q207A, R211S, F214L, D250E, A272S, K277R  
JCR043 JCR043m0 None None   V35T, E40D, K49R, V60I, V90I, D121Y, K122E, D123E, S162C, D177E, Q207E, R211K, V245I, D250E, K277R  
JCR044 JCR044m0 None None   I5V, V35T, E40D, K49KR, V60I, D123E, D177E, I178M, T200A, Q207K, R211K, V245K, D250E, A272P, K277R  
JCR045 JCR045m0 None None   V35T, V60I, K104KR, D121H, K122E, D177K, I178V, T200Q, I202V, Q207E, R211K, V245Q, D250E  
  JCR045m48 Unknown Unknown M184V K101KE, K103N E28EK, V35T, V60I, L100X, D121H, K122E, D177K, I178X, T200Q, I202V, Q207E, R211K  
JCR046 JCR046m0 None None M41L, M184V, T215Y Y181V V35T, K49R, V60I, D121Y, K122E, I135T, S162SN, T200V, Q207X, R211K, L228H, V245VI, A272P, K277R  
JCR047 JCR047m0 None None D67G, T69D, K70R, M184V, K219H A98G, V108I, Y181C V35T, K43E, K49R, V60I, I94L, K122E, I135M, S163SC, T165L, R172K, D177E, I178M, T200I, E204K, Q207E, R211K, E224K, V245K, D250E, A272P, Q278H E203R 
JCR048 JCR048m0 None None   V35T, E36D, K43R, K49R, V60I, K122E, D123G, I135T, S162C, D177E, I178L, T200I, Q207E, R211K, V245K, K249Q, D250E, A272P  
  JCR048m12 Unknown Unknown  V106VM, Y188YC E6EK, V35T, E36D, K43R, K49R, V60I, K122E, D123G, I135T, S162C, D177E, I178L, T200I, Q207E, R211K  
  JCR048m18 Unknown Unknown  V106VM E6K, V35T, E36D, K43R, K49R, V60I, K122E, D123G, I135T, S162C, D177E, I178L, T200I, Q207E, R211K  
JCR049 JCR049m0 None None K65R, Y115F G190A K11T, K20R, V21I, V35T, T39K, E40D, V60I, K122E, D123N, K173S, Q174K, D177E, V179I, G196A, I202V, Q207A, R211S, V245Q, E248N, A272P, I274V  
JCR050 JCR050m0 None None   V35T, K49R, V60I, D121Y, K122E, D123E, E169D, D177E, T200I, R211K, V245Q, E248D, D250E, A272P, K277R  
JCR051 JCR051m0 None None   V35T, T39M, K49R, V60I, V90I, D121Y, K122E, I135T, D177E, I178V, V179I, T200I, Q207E, R211K, I244V, V245I, A272S, K277R  
  JCR051m6 Unknown Unknown   V35T, T39M, K49R, V60I, V90VI, D121Y, K122E, I135T, D177E, I178V, V179I, T200I, Q207E, R211K  
  JCR051m48 Unknown Unknown   V35T, T39M, K49R, V60I, V90I, D121Y, K122E, I135T, D177E, I178V, V179I, T200I, Q207E, R211K  
JCR052 JCR052m0 None None   K11T, V21VI, V35T, T39E, K122E, D123G, I135T, K173S, Q174R, D177E, V179I, I202V, Q207A, R211S, V245Q, E248D  
JCR053 JCR053m0 None None   I5IV, K11T, V21I, V35T, E36D, T39K, V60I, K173S, D177E, V179I, T200A, I202V, Q207A, R211S, V245Q, E248N, A272P  
JCR054 JCR054m0 None None   K11T, K20R, V35T, V60I, D121Y, K122E, I142IV, Q174K, D177E, I178L, V179I, T200A, Q207E, V245Q, E248D, A272P  
  JCR054m24 Unknown Unknown M184V V106M, Y188H K20R, V35T, K49R, V60I, D121Y, K122E, Q174K, D177E, I178L, V179I, T200A, Q207E, P225L  
  JCR054m36 Unknown Unknown M184V V106M, Y188H K20R, V35T, V60I, S68G, K103X, D121Y, K122E, Q174K, D177E, I178L, V179I, T200A, Q207E  
JCR055 JCR055m0 None None   E6D, K11M, V35T, V60I, D121H, K122E, D123S, I178L, V179I, T200K, Q207A, R211S, V245Q, D250E  
JCR056 JCR056m0 None None   P4H, V35T, K102R, K122E, D123S, I135T, E138T, K173S, Q174K, D177E, V179I, Q207A, R211S, V245T, E248D, D250E, A272P  
JCR057 JCR057m0 None None   V35T, T39A, E40D, K122E, D123S, I135T, D177E, I178M, T200A, Q207E, R211K, V245K, D250E, D256E, A272P, K277R  
JCR058 JCR058m0 None None   P4H, E6K, K11Q, K20R, V21I, V35T, T39K, I50V, V60I, K122E, D123S, E138A, S162D, K166R, K173S, D177G, V179I, T200A, I202V, Q207A, R211S, V245Q, E248N, A272P, K277R  
JCR059 JCR059m0 None None   V35T, V60I, D121H, K122E, I142IV, D177E, I178M, T200M, Q207E, R211K, V245Q, D250E, A272S  
  JCR059m12 Unknown Unknown D67G V106M, Y188C V35T, K49R, V60I, D121H, K122E, I135X, I142IL, D177E, I178M, T200M, Q207E, R211K  
  JCR059m24 Unknown Unknown D67DG, Y115F, M184V V106M, Y188C V35T, K49R, V60I, D121H, K122E, D177E, I178M, T200M, E203K, Q207E, R211K  
JCR060 JCR060m0 None None   K20R, K32KR, V35T, T39K, V60I, K122E, D123S, I135T, E138A, K173S, Q174K, D177E, I178L, V179I, T200TI, I202V, Q207E, R211RK, F214L, V245Q, E248D, D250E, A272P  
JCR061 JCR061m0 None None D67G, K70R, M184V, K219Q A98G, K103N K11T, K20R, V35T, T39A, E40D, K43R, V60I, S68G, K122E, D123N, I135T, K173A, Q174K, D177E, G196E, Q197K, T200A, Q207A, R211S, F214L, D218E, V245E P97PS 
  JCR061m48 Unknown Unknown K70R, M184V, K219Q A98G, K103N K11T, K20R, V35T, T39A, E40D, K122E, D123N, I135L, I142V, K173A, Q174K, D177E, G196E, Q197K, T200A, Q207A, R211S, F214L, L228R  
JCR063 JCR063m0 None None   K11T, K20R, V21I, V35T, T39K, K43KQ, I50V, V60I, K122E, D123S, T139TA, I142V, K173L, Q174K, D177E, V179I, I202V, Q207A, V245Q, K277R  
JCR064 JCR064m0 None None   V35T, K49R, V60I, K122E, D123N, I135T, K173L, Q174K, D177E, V179I, T200A, Q207S, R211S, V245E, D250E, A272T, K277R  
  JCR064m6 Unknown Unknown   V35T, K49R, V60I, K122E, D123N, I135T, K173L, Q174X, D177E, V179I, T200TA, Q207S, R211S  
  JCR064m48 Unknown Unknown K70KE, M184MV Y181YC, G190A E6D, V35T, T39E, E40EK, K43N, V60I, K122E, D123S, I135T, I142V, K173S, Q174K, D177E, V179I, T200X, Q207A, R211S, L228LR  
JCR065 JCR065m0 None None   V35T, E40ED, V60I, D121H, K122E, D123S, I135T, E138A, I142V, S162A, K173S, Q174K, V179I, T200E, I202V, Q207A, R211S, E248D  
JCR066 JCR066m0 None None   V35T, E40ED, V60I, D121H, K122E, D123S, I135T, E138A, I142V, S162A, K173S, Q174K, V179I, T200E, I202V, Q207A, R211S, E248D  
JCR067 JCR067m0 None None   V35VI, V60I, D121H, K122E, I135T, D177E, I178M, T200I, Q207X, R211K, V245K, D250E, A272P, K277S E42K, A62S 
JCR068 JCR068m0 None None   V35T, E36A, T39E, S48T, V60I, K122E, I142V, K173A, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248D, A272P  
JCR069 JCR069m0 None None   V35T, E36A, T39E, E40D, S48T, V60I, K122E, I135T, E138A, K173A, Q174K, D177E, I178V, V179I, T200A, I202V, Q207D, R211K, V245K, D250E, A272P  
JCR070 JCR070m0 None None M184V, K219Q G190A E6D, K20R, V35T, E40D, K43R, K46R, V60I, K122E, D123N, I135T, E138A, K173S, Q174K, D177E, V179I, T200A, I202V, E203K, Q207D, R211K, V245Q, E248D, D250E E42K 
  JCR070m18 Unknown Unknown T69D, K70R, M184V, K219Q G190A E6D, K20R, V35T, E40D, K49R, V60I, K122E, D123N, I135T, E138A, K173S, Q174K, D177E, V179I, T200A, I202V, E203A, Q207A, R211K  
JCR071 JCR071m0 None None   K11T, V35T, T39A, S48T, K122E, D123N, I135T, K173S, D177E, Q207A, R211S, F214L, V245T  
JCR072 JCR072m0 None None   E6D, V35T, T39K, E44D, V60I, V118I, K122E, D123N, I142V, E169D, K173L, Q174K, D177E, T200A, I202V, Q207E, F214L, V245E, S251I  
  JCR072m48 Unknown Unknown V75M, M184V K103N, P225H E6D, I31L, V35T, T39K, E44D, V60I, W88C, V118I, K122E, D123N, I142V, E169D, K173L, Q174K, D177E, T200A, I202V, Q207E, F214L, H221Y  
JCR073 JCR073m48 Unknown Unknown  G190A V35T, K43Q, V60I, K122E, D123S, I142V, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S