Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Hachiya (2017)
Title Trends in transmitted drug-resistant HIV-1 and demographic characteristics of newly diagnosed patients: Nationwide surveillance from 2013 to 2015 in Japan.
Citation Direct Genbank Submission
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 1553
NumPts 1552
Subtype B, CRF01_AE, C, CRF02_AG, G, A, F, CRF06_cpx, CRF09_cpx, J, CRF69_01B, CRF55_01B, D, CRF63_02A1, Unknown


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Page 1   listing Isolate 1 to Isolate 100 from Total 1553 Clinical IN Isolates

A13-2010159 LC160348 None    S17N, Y99YF, L101I, T124A, K156N, D256E  
A13-2010160 LC160349 None    L45V, L101I, V201I, K215N  
A13-2010161 LC160350 None    E11D, V31VI, S39C, L101I, K111A, S119T, T206S, I208L  
A13-2010162 LC160351 None    S39C, L101I, V110I, T124A, V201I P142A 
A13-2010163 LC160352 None    A23AV, S24G, L28I, T125A, I135IV, K215N, Q216N, S230N, L234I, D256E  
A13-2010164 LC160353 None    S17N, L101I, T124A, T125A, K156N, V201I, D256E  
A13-2010165 LC160354 None    S17N, L28I, S39C, K156N, V201I  
A13-2010166 LC160355 None    E11D, R20K, T112TI, K156N, V201I, D256DE  
A13-2010167 LC160356 None    D25E, L101I, K156N, I162V  
A13-2010168 LC160357 None    D25DE, K156N  
A13-2010169 LC160358 None    K14R, A23V, L28I, L45I, T124A, T125A, K156N, I200M, V201I, L234I  
A13-2010170 LC160359 None    A21AS, S24G, L45V, L74I, D256E  
A13-2010171 LC160360 None    S17SN, L45V, M50MI, L101I, K111KR, G163E  
A13-2010172 LC160361 None    D6E, E10D, S39C, L101I, K156N, I203M  
A13-2010173 LC160362 None    L28I, T124TN, K156N, I203IM, I204IV, I217V  
A13-2010174 LC160363 None    S17N, L45V, M50MI, L74I, T124TA, T125TA, G163E, V201VI, I220L, L234I  
A13-2010175 LC160364 None    R20K, M50L, K156N, V201I  
A13-2010176 LC160365 None    A23V, L28I, L45I, T124A, T125A, K156N, A205T, L234I  
A13-2010177 LC160366 None    D6E, E10ED, S17SN, L45V, M50MI, L74I, T124TA, G163GE, R187RK, A205S, T218S, I220L, D253E  
A13-2010178 LC160367 None    V31I, I84M, L101I, S119P, V201I, T206S, I208L, D256E, M275V  
A13-2010179 LC160368 None    R20RK, L45V, I84L, L101I, I203M, T206S  
A13-2010180 LC160369 None    E10ED, E11ED, K14KR, A21T, S39N, L45V, M50I, L74I, L101X, T125A, G163E, H171Q, D279G  
A14-2010181 LC160370 None    S17N, L28I, L45I, K156N, E212A, I220L  
A14-2010182 LC160371 None    S24SG, M50X, I84M, L101I, V201I, I203M  
A14-2010183 LC160372 None    S17N, M50I, I72IS, P90S, L101I, T124A, K156N, K173KR, V201I  
A14-2010184 LC160373 None    S17N, L28I, S39C, K156N, V201I, K215KN, Q216X, T218TS, I220IL  
A14-2010185 LC160374 None    E11D, S39C, L101I, K111A, S119T, T206S, I208L  
A14-2010186 LC160375 None    R20K, K156N, V201I  
A14-2010187 LC160376 None    S17N, L45V, M50I, L74I, T124A, G163E, V201I, I220L  
A14-2010188 LC160377 None    S17N, A23V, L28I, L45I, L101LI, K156N, E198Q, V201I, D256E  
A14-2010189 LC160378 None    E11D, K14R, A21T, L28I, V31I, V32I, V37I, I72V, T112V, T124N, T125A, G134N, K136R, V165I, V201I, T218S, L234I, N254S, S255D S39K 
A14-2010190 LC160379 None    K14R, S17N, L101LI, K156N, V201I, I220L  
A14-2010191 LC160380 None    E11D, S17C, I72V, G106A, T112R, T124N, M154I, V201I, T218S, K219N, N222K  
A14-2010214 LC160381 None    L101LI, T124TA, K156N, V201I, I203IM, I208IL, D256E  
A14-2010215 LC160382 None    V31I, I84M, L101I, S119P, V201I, T206S, I208L, D256E, M275V  
A14-2010216 LC160383 None    R20K, V31VI, L101LI, K156N, V201I  
A14-2010217 LC160384 None    K14R, R20K, L63I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, G193E, V201I, L234I, D279G, V281M  
A14-2010218 LC160385 None    V31I, K42Q, M50I, I84M, L101I, T112V, T124A, T125A, I135V, K136Q, V201I, L234S, R269K, D278A  
A14-2010219 LC160386 None    R20K, L101LI, K156N, I162V, V201I, D256E  
A14-2010220 LC160387 None    R20K, M50L, I72X, L74LV, K156N, V201I, N254K  
A14-2010221 LC160388 None    S17SN, T124TA, K156N, V201VI  
A15-2010200 LC160389 None    N27NK, L28I, L45I, M50I, G70N, L101I, K156N, D256E  
A15-2010201 LC160390 None    S39C, I72V, T124N, M154L, V201I  
A15-2010202 LC160391 None    K156N, V201I, D256DE  
A15-2010203 LC160392 None    V31I, I84M, L101I, S119P, V201I, T206S, I208L, D256E, M275V  
A15-2010204 LC160393 None    V31I, I84M, L101I, S119P, V201I, T206S, I208L, D256E, M275V  
A15-2010205 LC160394 None    V88L, T125A, K156N, V176I, V201I, I203IM, I220V, S230SN  
A15-2010206 LC160395 None   L74M A23V, S24G, L28I, L45I, T124A, T125A, K156N, A205T, L234I  
A15-2010207 LC160396 None    K14R, A21T, A23V, V31I, T112V, T124A, T125A, G134N, K136R, V165I, D167E, V201I, L234I  
A15-2010208 LC160397 None    V31I, I84M, L101I, S119P, G163GE, Q177L, V201I, T206S, K215N  
A15-2010209 LC160398 None    I72V, L74I, I84IV, T112X, T124A, Q177L, V201I, K215S, D253H  
A15-2010210 LC160399 None    T125A, E198D, V201VI, I203M, I208L, I220L  
A15-2010211 LC160400 None    K14R, A23V, L28I, L45I, T124A, T125A, K156N, A205T, L234I  
A15-2010212 LC160401 None    A23V, L28I, P30A, I72T, T112A, I113V, T124A, T125A, K156N, A205T, L234I  
A15-2010213 LC160402 None    A23AV, V31I, S119G, T122I, T125A, V201I, K215N, Q221S, N222K, D256E, R269K  
A15-2010214 LC160403 None    R20K, M50L, K156N, V201I, I203IM  
A15-2010215 LC160404 None    R20K, M50L, K156N, V201I  
A15-2010216 LC160405 None    R20K, M50L, K156N, V201I, S255SR  
A15-2010217 LC160406 None    E11D, R20K, C56S, K156N, V201I  
A15-2010218 LC160407 None    E11D, S17T, L28I, V37I, K156N, V165I  
A15-2010219 LC160408 None    E11D, S17T, L45V, L101I, T112I, T124A, I135V, G163E  
A15-2010220 LC160409 None    D25E, L101I, K156N, K215KN  
A15-2010221 LC160410 None    R20K, L28I, K156N, V201I  
A15-2010222 LC160411 None    A23V, L28I, P30A, T112A, T124A, T125A, K156N, A205T, L234I  
A15-2010223 LC160412 None    K7R, L45V, I203M, T206S  
A15-2010224 LC160413 None    K7R, M22I, A23V, L28I, L45V, L101I, G163GE, V201I, K211Q, I217V, T218S  
A15-2010225 LC160414 None    K7R, N27S, S39C, L101I, I220L  
A15-2010226 LC160415 None    R20RK, L28LI, L45I, L101I, T124A, T125A, K156N, A205T, L234I  
B14-5110103 LC160416 None    L28I, S39C, I113V, K156N, K215KR, Q216N, L234H  
B14-5110105 LC160417 None    V31I, K111T, S119ST, T124N, T125A, I135V, V201I, T206S, I217S, S230N  
B14-5110106 LC160418 None    E11D, S24N, L74I, T112I, G163E, K173KR, V201I, D286DN  
B14-5110107 LC160419 None    S17N, S39C, L45I, T124A, T125A, V126L, K156N, V201I, K215N, Q216R  
B14-5110108 LC160420 None    A23AG, V31I, I72V, I113V, T124N, V201I, I203IL, K215N, Q221S, N222K, D256E E152EK 
B14-5110109 LC160421 None    V31I, I72V, I113V, T124N, V201I, I203IL, K215N, Q221S, N222K, D256E  
B14-5110110 LC160422 None    S17N, L28LI, S39C, L45I, T124A, K156N  
B14-5110111 LC160423 None    K14R, V31I, M50R, L101I, T112V, T124X, T125A, G134N, K136T, G163E, V201I, T206S, D232E, L234I, R269K, S283G, R284G, D286N  
B14-5110112 LC160424 None    M22MR, M50MI, S81SR, T112TI, M154L, V201I, D256DE, A265AV A33AP 
B14-5110113 LC160425 None    L28I, S39C, I84IM, V201I, E212A, K215S  
B14-5110114 LC160426 None    D6DE, S17N, L101I, T125A, K156N, E198D, V201I, Q252QK  
B14-5110115 LC160427 None    K14KR, S17SN, T124A, T125A, K156N, S230N, R231RK, L234V  
B15-5110116 LC160428 None    K14R, V31I, I72V, T112V, I113IV, T124A, T125A, G134N, I135V, K136R, G163E, V201I, L234I, S283G  
B15-5110117 LC160429 None    K14R, S39M, I72V, T112V, S153SA, M154I, V201I  
B15-5110118 LC160430 None    L74X, A91AS, T112V, T125TA, G163E, E198D, V201I, I204L E69ED 
B15-5110119 LC160431 None    E11D, R20K, L28I, A91S, L101I, S119G, T122I, T125A, E157EQ, G163GV, D167E, I200L, V201I, I203M, K215N, I220V, Q221S, N222K, D256DE  
B15-5110120 LC160432 None    V31I, I141V, K156N, V201I, I217V, S283SG, D288DN  
B15-5110121 LC160433 None    S17N, A23V, V31I, A49S, T124S, V201I, D256DE, S283G  
B15-5110122 LC160434 None    S17N, L45I, T124A, K156N, I220L  
B15-5110123 LC160435 None    T124A, K156N  
C10-000710058419 LC160444 None    K14R, S17C, L101I, I113V, T124A, T125A, M154I, V165I, Q177L, V201I, T218S  
C12-000710695869 LC160446 None    V31I, I84V, L101I, I113V, K156N, V201I, K211R  
C12-00077198884 LC160445 None    L101I, K103R, T124N, I135V, V201I, I203L, D256E  
C12-00078834059 LC160447 None    E11D, S24N, D25E, T112V, K156N, E157Q, K215N  
C13-000710805346 LC160436 None    S17N, E35Q, L101I, K156N, V201I, I208L  
C13-000710880194 LC160438 None    E11D, S24N, S119P, T122I, K156N, D288N  
C13-000710908056 LC160441 None    L28I, T112I, V201I, T218S, I220L  
C13-000710924663 LC160440 None    E11D, K14R, S24N, V31I, I60M, I72V, V79I, I113V, S119P, T125A, I162V, V201I  
C13-000710950087 LC160442 None    M50I, I72V, T125A, K156N, V176L, V201I  
C13-00079896457 LC160437 None    L28I, L101I, K156N, K215N, D279G  
C13-0007990272 LC160439 None    E11D, K14R, V31M, V32I, S39C, L101I, T112I, S119T, T125A, I135V, S195T, I203M, T206S, Q216H, S230N  
C95-00079582908 LC160443 None    S39C, L45Q, V201I, I203M