Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Castley (2017)
Title A national study of the molecular epidemiology of HIV-1 in Australia 2005-2012.
Citation PLoS ONE
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 4870
NumPts 4870
Subtype B, C, CRF01_AE, CRF02_AG, A, D, G, CRF07_BC, B + CRF01_AE, CRF12_BF, B + F, B + C, F, CRF50_A1D, CRF35_AD, CRF60_BC, CRF24_BG, CRF08_BC, CRF33_01B, CRF59_01B


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Page 1   listing Isolate 1 to Isolate 100 from Total 4870 Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
sam201019640123 sam201019640123 Unknown Unknown  K103N V35I, A98S, K122P, A158S, K173E, D177G, V179I, T200A, Q207E  
sam201019640140 sam201019640140 Unknown Unknown   V35T, T39K, K43E, K122E, D123S, I135L, S163T, T165I, R172K, K173S, Q174K, D177E, T200X, E204EA, Q207X  
sam201019640143 sam201019640143 Unknown Unknown   K20R, A98S, D123E, I135K, I178L  
sam201019640201 sam201019640201 Unknown Unknown D67DN  V60VI, I135L, S162SC  
sam201019640209 sam201019640209 Unknown Unknown   K102Q, S162C, K173Q  
sam201020006543 sam201020006543 Unknown Unknown   K20KR, A98S, D123E, I135K, D177E, I178L  
sam201020106524 sam201020106524 Unknown Unknown   K20R, V35T, T39X, K122E, I135X, Q145C, S162C, K173S, D177E, T200A, Q207A  
sam201020258479 sam201020258479 Unknown Unknown   V35T, T39TA, K122E, I135T, S162C, E169D, I202V  
sam201020650791 sam201020650791 Unknown Unknown   T27S, V35T, E36EA, T39E, S48T, E53D, K122E, D123X, I135T, S162Y, K173A, Q174K, D177E, G196K, T200A, Q207E  
sam201020651815 sam201020651815 Unknown Unknown   K20R, V35I, V60I, I135L, K166R, G196GE, E203EK  
sam201020785294 sam201020785294 Unknown Unknown   V35T, E36A, T39E, S48T, K122E, D123X, I135IV, T165I, K173A, D177E, I178M, T200A, E204K, Q207E  
sam201020786165 sam201020786165 Unknown Unknown   K20R, V60I, A98AS, I135IR, K166KR, D177DE, I178L, V179VI, Q207H  
sam201020786291 sam201020786291 Unknown Unknown   V35I, D123E, D177DE, I178M, T200X, E204EK, Q207E  
sam201020798036 sam201020798036 Unknown Unknown   K20KR, K104R, I135V, S162C, Q174X, E194EA, I195L  
sam201020823461 sam201020823461 Unknown Unknown   S68G, K122E, R172K, K173R, T200A, Q207E  
sam201020835856 sam201020835856 Unknown Unknown   V21I, E36D, T39A, R83K, D123E, T200I  
sam201020844189 sam201020844189 Unknown Unknown   K122KE, I142IT  
sam201020851044 sam201020851044 Unknown Unknown   D123E, T165TI, D177E  
sam201020857905 sam201020857905 Unknown Unknown   V35T, E36A, T39E, S48T, V60I, K103R, D121Y, K122E, D123E, I135T, I142IV, S162T, K173A, D177E, E194P, T200A, Q207E  
sam201020959768 sam201020959768 Unknown Unknown   K122E, I142T, K166I, T200I, I202V  
sam201021032866 sam201021032866 Unknown Unknown   K20R, V21I, V35T, T39E, E40D, T69S, K122E, D123N, K173S, D177E, V179I, T200A, I202V, Q207K  
sam201021508628 sam201021508628 Unknown Unknown   V60I, R83K, I135T, S162Y, G196E, T200I  
sam201021830432 sam201021830432 Unknown Unknown   V35T, T39K, K43E, K122E, D123S, S162C, K173R, Q174K, D177E, I178M, Q207A  
sam201022103235 sam201022103235 Unknown Unknown   V60I, I135L, T200TA  
sam201022108496 sam201022108496 Unknown Unknown   K20R, V35T, E36D, T39X, V111VI, K122KQ, D123E, I135IV, S162A, T165TI, K173X, Q174QK, D177E, T200X, I202V, Q207X  
sam201022333559 sam201022333559 Unknown Unknown   E28EG, V35I, V60I, I135L, T200TA  
sam201090017957 sam201090017957 Unknown Unknown   V35M, S68G, D86E, K103KR, K122P  
sam201090060379 sam201090060379 Unknown Unknown   V35T, T39E, S48T, T69S, K122E, D123DG, E138A, K173T, D177X, T200A, Q207D  
sam201090119902 sam201090119902 Unknown Unknown   V35T, E36D, V60VI, K102KQ, D121X, K122E, I135V, S162A, K173I, Q174K, D177E, T200A, Q207A  
sam201099803710 sam201099803710 Unknown Unknown  V108VI, V179VD E28K, K32E, V35I, V60I, W88X, V90X, D121DH, K122KE, D123DE, I135L, K166KR, P176PS, T200A  
sam201099986042 sam201099986042 Unknown Unknown   K22KR, T27TP, V35T, T39N, K122E, D123S, R172K, K173S, Q174K, D177E, I178M, T200TA, Q207A  
sam201112242272 sam201112242272 Unknown Unknown   V35T, T39K, K43E, T69TN, K122E, D123S, I135T, T139A, S162C, Q207A  
sam201114648212 sam201114648212 Unknown Unknown   T27S, V35T, E36A, T39E, S48T, K102KQ, K122KE, K173A, D177G, T200X, Q207E  
sam201115894934 sam201115894934 Unknown Unknown   I142V, S162A, T200A, Q207A  
sam201117142811 sam201117142811 Unknown Unknown   V60I, R83K, I135V, S162C  
sam201119640144 sam201119640144 Unknown Unknown   V35M, T69S, A98S, A158S, S162C, T200A, Q207H  
sam201119640194 sam201119640194 Unknown Unknown   K103R, I178M, T200I  
sam201119640217 sam201119640217 Unknown Unknown   T39TA, S68N, I135V, A158AT, S162C, D177E  
sam201119640247 sam201119640247 Unknown Unknown   V35VI, K103R, I178M, T200I  
sam201119640250 sam201119640250 Unknown Unknown   V35T, T39K, K43E, K64R, K122E, D123S, S162C, K173R, Q174X, D177E, I178M, Q207A  
sam201120055849 sam201120055849 Unknown Unknown   V35T, D86E, K122P, S162C, D177E, E194X, G196E, E203D  
sam201120055850 sam201120055850 Unknown Unknown   V60I, V118I, D123E, I135R, Q207E  
sam201120823325 sam201120823325 Unknown Unknown  K103KN K122E, S162C, I178M, E204Q  
sam201121830650 sam201121830650 Unknown Unknown   E53D, D121DE, K122KE, I142T  
sam201121986259 sam201121986259 Unknown Unknown   K20R, A98S, D123E, I135K, D177E, I178L  
sam201122976612 sam201122976612 Unknown Unknown   V35T, T39M, V60I, K122E, D123S, I135IV, G196E  
sam201123141923 sam201123141923 Unknown Unknown   K22KR, V35X, E36A, T39E, E40ED, S48T, K102KQ, K122E, D123S, A158S, K173X, Q174K, T200A  
sam201123141944 sam201123141944 Unknown Unknown   K20R, V35T, T39K, K43E, K64KR, D121DH, K122E, D123S, S163SC, K173I, Q174K, D177E, I178X, V179I, G196A, T200I, I202V, Q207A  
sam201123476169 sam201123476169 Unknown Unknown   D123E, I135T, S162C, T200A  
sam201123700272 sam201123700272 Unknown Unknown  V179VD V60I, I135L, M164MI, I178IM, G196GE, T200TA, Q207H  
sam201123997269 sam201123997269 Unknown Unknown   K32N, S48T, V60I, D123E, I135X, S162A, D177E, T200A  
sam201123997325 sam201123997325 Unknown Unknown   S68G, V90I, A98S, T200X, Q207E  
sam201124083375 sam201124083375 Unknown Unknown   Q197K  
sam201124150495 sam201124150495 Unknown Unknown   A98S, D123E, I135T, S162A, E203D  
sam201124228040 sam201124228040 Unknown Unknown   D123E, I135T, S162C, T200A  
sam201124228042 sam201124228042 Unknown Unknown   K102KR, K104KR, D123E, I135T, D177E, I178M, V179VI, T200A  
sam201130024539 sam201130024539 Unknown Unknown   V35I, T39K, K43E, S68G, V90VI, K122E, D123X, I135IT, S162A, K173X, Q174K, Q207A  
sam201130040121 sam201130040121 Unknown Unknown  K103N V35X, V60I, A98AS, D123E, K166KR, D177E, T200A  
sam201130384650 sam201130384650 Unknown Unknown   V60I, K101Q, K102Q, D123E, Q174X, N175NY, D177DE, I178IM, V179VI, T200TA  
sam201130408244 sam201130408244 Unknown Unknown   I31IV, V35T, E36X, T39E, S48T, K122E, D123N, S162C, K173A, Q174QR, D177E, I178L, T200A  
sam201130417851 sam201130417851 Unknown Unknown   V21I, E36D, T39A, K64KR, R83K, D123E, T200I  
sam201130546023 sam201130546023 Unknown Unknown   V35T, T69TI, D86E, K122P, S162C, D177E, G196E, E203D  
sam201130591960 sam201130591960 Unknown Unknown   K102Q, S162A  
sam201130592064 sam201130592064 Unknown Unknown   A98S, P119PS, D123E, I135T, S162A, E203D  
sam201130673601 sam201130673601 Unknown Unknown   K20R, D123E, E169D, I178V  
sam201130704066 sam201130704066 Unknown Unknown   V35I, A98S, V189I, T200A, Q207H  
sam201130812542 sam201130812542 Unknown Unknown   A98S, D123E, I135IV, S162A, D177E, G196E, Q207E  
sam201131038224 sam201131038224 Unknown Unknown   V35I, V106VI, K122E, Q207E  
sam201131130046 sam201131130046 Unknown Unknown   V35T, E36D, T39X, V60I, I135V, S162A, K173KT, Q174E, D177E, I178M, Q197QE, T200A, E204K, Q207E  
sam201131245743 sam201131245743 Unknown Unknown   V35I, A98S, I135X, K173KE, T200A, Q207H  
sam201131600684 sam201131600684 Unknown Unknown   K20R, A98S, K122KE, D123E, I135K, D177E, I178L  
sam201131768998 sam201131768998 Unknown Unknown   K102Q, S162A I37IM 
sam201132058136 sam201132058136 Unknown Unknown   F77FS, K122E, S162C, I178M, E204Q E79EG, R83RS 
sam201132092009 sam201132092009 Unknown Unknown   V35T, T39N, S48T, V60I, A98S, D121X, K122E, I135T, K166KR, K173A, Q174QR, D177E, T200X, Q207N  
sam201190415995 sam201190415995 Unknown Unknown   K20R, V35T, T39G, S48T, K122E, D123S, I135T, S162H, K173A, Q174K, D177E, T200A, Q207E  
sam201222026640 sam201222026640 Unknown Unknown   V60I, I135T, G196E, Q207X  
sam201230630697 sam201230630697 Unknown Unknown  V108VI I50V, K103R, V118VI, D123E, K173N, Q197QP, I202V  
sam201230635606 sam201230635606 Unknown Unknown   S48E, T69N, V118I, D177G  
sam201231393375 sam201231393375 Unknown Unknown   V35I, V60I, K103KR, D123DE, I135L, Q174R, G196E  
sam201232092011 sam201232092011 Unknown Unknown   V35I, A98S, K122E, D123G, I135L, D177G, G196E, T200S  
sam201232092025 sam201232092025 Unknown Unknown   S68SR, I135T, G196E, T200I  
sam201232092026 sam201232092026 Unknown Unknown   D121H, K122E, S162C, D177E, I178M, T200A  
sam201232092093 sam201232092093 Unknown Unknown   K20R, K122E, D123G, I135T, S162C, V179I, I195T  
sam201232092098 sam201232092098 Unknown Unknown   K20R, V35I, K43KE, V60I, K66KR, V106VI, K122E, I135L, K166R, I178M, T200A  
sam201232092180 sam201232092180 Unknown Unknown   V35T, V60I, S68SN, D121Y, K122E, I135T, E138A, K166KR, D177X, I178IM, V179I, T200I, Q207A  
sam201232092185 sam201232092185 Unknown Unknown   V35T, C38X, T39K, K43X, K49R, V60I, S68G, K122E, D123S, K173X, Q174K, T200A, Q207A  
sam201232092187 sam201232092187 Unknown Unknown   K20R, D123E, K166R, K173T, D177E, Q197E, T200A  
sam201232092201 sam201232092201 Unknown Unknown   V35M, T39TA, D123E, I142V, A158S, S162C, T200A, I202V  
sam201233049194 sam201233049194 Unknown Unknown   V35T, E36A, T39E, S48T, K122E, D123N, T165I, T200E, E204K, Q207E  
sam201233694639 sam201233694639 Unknown Unknown   V35T, D86E, A98S, K122P, S162C, D177E, G196E, E203D  
sam201234032805 sam201234032805 Unknown Unknown   V35T, T39K, K43E, V60I, S68G, K122E, D123S, I135T, K166R, K173I, Q174K, D177E, I178M, T200I, Q207T  
sam201234296694 sam201234296694 Unknown Unknown   V35T, K64R, D123E, I135V, A158S, S162A, K173T, Q174R, D177E, V179VI, T200A, E203EG, Q207E  
sam201234436539 sam201234436539 Unknown Unknown   V21I, V35T, T39K, K43E, K103R, K122E, D123S, S162Y, K173L, Q174K, D177E, V179I, Q207A  
sam201234867918 sam201234867918 Unknown Unknown   V60I, D123DE, I135L, T200TA  
sam201235010597 sam201235010597 Unknown Unknown   K20KR, K103R, S162C  
sam201235391677 sam201235391677 Unknown Unknown   T27S, A98S, D123E, E138A, T200V  
sam201235391690 sam201235391690 Unknown Unknown   G196E, Q207E  
sam201236242205 sam201236242205 Unknown Unknown   K122E, I135T, S162C, I202V  
sam201290146847 sam201290146847 Unknown Unknown   V35T, E36D, D121Y, K122E, I135V, I142IT, S162A, K173X, Q174K, D177G, T200A, Q207A  
sam201299751026 sam201299751026 Unknown Unknown   V35T, T39K, K43E, L109V, K122E, D123S, K173I, Q174K, D177E, Q207A E29EK