<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Verhofstede (2017)
Title Decision tree for accurate infection timing in individuals newly diagnosed with HIV-1 infection.
Citation BMC Infect Dis
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 539
NumPts 539
Subtype B, CRF02_AG, F, A, C, CRF01_AE, G, D, CRF06_cpx, B + C, CRF25_cpx, B + CRF01_AE, CRF09_cpx, A + G

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 539 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
3071 3071 None    I13V, K20I, M36I, R41K, L63LP, C67S, H69R, K70KR, I72IV, V82I, L89M  
3078 3078 None    E35D, R57K, Y59F, I62V, L63N, A71V, I72A, V77I, I93L  
3084 3084 None    K20R, E35D, M36I, R41K, I62IV, L63X, H69K, I72T, L89M  
3086 3086 None    L10V, I15V, L19T, M36I, L63T, H69K, I72IV, T74S, L89M, I93L  
3087 3087 None   Q58E G16E, N37K, P39S, R41K, K43R, L63P, A71T, I93L  
3090 3090 None    L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, L89M  
3107 3107 None    I13V, K14R, I15V, K20I, M36I, N37S, R41K, H69K, K70R, L89M  
3114 3114 None    T12A, K14R, I15IV, L19LF, K20KR, E35ED, M36I, N37D, D60DE, I62IV, L63X, E65ED, A71AT, I72X, T74TS, L89LM  
3122 3122 None    T12P, I13V, G16GE, K20R, M36I, I62V, L63N, I64V, I72V  
3134 3134 None    T12K, E35D, M36MI, R41K, L63P, I64L, A71V, I72IM, V77I, P79PS, I93L  
3138 3138 None    L10V, I15V, G16E, K20R, E35D, M36I, P39S, R41K, I62V, T74A, L89M  
3147 3147 None    I13V, I15V, G16E, K20M, E35E_N, M36X, K43R, R57K, Q61E, I62V, L63D, I64V, E65D, I72V  
3155 3155 None    T12TA, K14R, K20R, M36I, N37D, D60E, I62V, L63P, I72E  
3159 3159 None    L10V, I13V, K14R, I15V, G16E, E35D, M36I, R41K, R57K, L63LV, H69K, L89M  
3161 3161 None    L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, V77VI, L89M  
3164 3164 None  M46L  L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, A71V, I72T, V77I, L89M, I93L  
3170 3170 None    G16E, E35D, N37D, I62V, K70T, I72V, V77I L63K 
3178 3178 None    T12S, I13V, K14X, G16E, L19I, K20I, M36I, R41K, K43R, Q61QH, I64M, H69K, K70R, L89M  
3183 3183 None    L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, L89M  
3189 3189 None    L10I, I13V, L63A, F99L  
3196 3196 None    L10V, I13V, I15V, G16E, E35D, M36I, R41K, R57K, H69K, L89M  
3197 3197 None    K14KR, E35ED, N37X, R41RK, I62IV, L63P, I64IL, I72IT, I93IL  
3199 3199 None    G16GE, L19LI, I62V, L63S, I64V, E65D  
3211 3211 None    T12S, K14I, I15V, L19K, R41K, L63P, H69K, A71T, I72M, L89M, I93L  
3212 3212 None    E35D, N37Q, R41K, L63P, A71T, I72V, I93L  
3216 3216 None    K14KR, I15IV, Q18QH, L19V, E35D, M36I, R41K, H69K, T74S, L89M, I93L  
3228 3228 None    L10I, I13V, L19V, L33V, R41RK, L63C, H69Y, I72V, I93L  
3245 3245 None   L10F T12A, E35D, N37S, R41K, I62V, L63P, A71T, V77I, I93L  
3248 3248 None    I13V, K14R, G16E, K20I, E35D, M36I, R41K, K43KR, H69K, K70R, L89M  
3249 3249 None    T12A, I13V, K14R, G16E, K20I, M36I, R41K, H69K, L89M  
3260 3260 None    L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, L89M  
3264 3264 None    I13V, K14R, K20X, E35N, M36I, N37E, P39PL, L63P, H69K, K70E, L89M  
3267 3267 None    E35ED, N37NS, I62V, L63A, V77I, L89M, I93L  
3281 3281 None    L63Q, I64V, V77I  
3282 3282 None    N37A, D60DE, L63X, I64IV, V77I  
3285 3285 None    I13V, N37C, L63Q, V77I  
3287 3287 None    L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, L89M  
3295 3295 None    K14R, R41K, R57RK, D60E, Q61E, L63P, I72V, V77I, I93L  
3297 3297 None    I64IV, C67S, V77I  
3302 3302 None    L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, V77VI, L89M  
3303 3303 None    I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, L89M  
3311 3311 None    L10I, T12K, E35D, N37NS, R41K, L63P, H69Q, A71T, I93L  
3312 3312 None    E35D, N37D, D60E, Q61E, L63P, V77I, I93L  
3315 3315 None    E35D, N37S, P39PS, R41K, I62V, L63P, A71T, V77I, I93L  
3316 3316 None    L10X, T12E, E35D, N37S, R41K, L63P, A71T, I93L  
3323 3323 None    I13V, G16E, K20I, E35D, M36I, R41K, H69K, K70R, I72T, L89M  
3324 3324 None    K20R, M36I, N37D, I62V, L63S, I72V  
3331 3331 None    I13V, K14R, K20I, E35D, M36I, R41K, I64M, H69K, K70KR, L89M  
3335 3335 None    L10V, T12TI, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61D, I62V, L63LH, H69Y, I72T, L89M  
3344 3344 None    I13V, G17E, K20I, E35D, M36I, R41K, L63X, H69K, K70R, L89M  
3346 3346 None    L10I, K14R, R41K, I93L  
3352 3352 None    I13V, K14R, K20I, E35D, M36I, R41K, I64M, H69K, K70KR, L89M  
3354 3354 None    I13V, G16A, M36X, R41K, K43R, I62V, L63P  
3359 3359 None    L10I, I15IL, L19I, R41K, D60E, I62IV, L63P, V77I, I93L  
3369 3369 None    N37S, I62V, L63A, V77I, L89M, I93L  
3371 3371 None    L10V, I13V, G16E, E35D, M36I, P39T, R41K, R57K, D60E, Q61N, H69Y, I72T, V77I, L89M  
3372 3372 None    L10V, T12S, I15V, L19I, K20R, E35D, M36I, N37S, R41K, R57K, I62IV, L63T, E65D, I72T, T74S, L89M  
3377 3377 None    N37S, I62V, L63A, V77I, L89M, I93L  
3379 3379 None    I13V, K14KR, I15V, K20R, E35D, M36I, N37D, R41K, K43KR, L63P, E65D, H69K, I72V, L89M  
3382 3382 None    I13V, K20I, M36I, N37D, R41K, H69K, L89M  
3384 3384 None    N37S, I62V, L63X, V77I, L89LM, I93L  
3389 3389 None    T12S, I13V, M36I, L63P  
3390 3390 None    L10V, I13V, G16E, K20I, M36I, N37T, P39S, R41K, L63P, I64M, H69K, K70R, L89M  
3392 3392 None    L33V, N37A, R57K, L63S, I64V, I72V, I93L  
3394 3394 None    I13V, K14R, I15V, K20I, E35D, M36I, R41K, K55R, L63P, H69Q, A71T  
3399 3399 None    L10I, T12K, L19V, E35D, R41K, L63P, K70KE, A71T, I93IL  
3413 3413 None    T12A, E35D, N37S, R41K, D60E, I62V, L63A, I64V  
3415 3415 None    I13V, E35D, M36I, N37E, R41K, R57K, D60E, H69K, L89M  
3417 3417 None   L33I I13V, K14T, G16E, K20KR, E35D, M36I, K45R, R57K, L63S, H69K, L89M  
3419 3419 None    L10I, I13V, G16E, E35D, M36I, R41K, K45R, D60E, I62V, L63T, H69Q, V77I, L89M  
3420 3420 None    K14KE, N37S, R41K, I62V, L63P  
3426 3426 None    T12P, L19I, E35D, R41K, I62V, L63S, C67Y, A71T, I93L  
3430 3430 None    L10V, I13V, K14R, E35D, M36I, R41K, H69K, K70R, L89M  
3439 3439 None    T12A, I13V, K14R, I15V, K20I, M36I, N37S, R41K, C67Y, H69K, K70R, I72V, L89M  
3441 3441 None    I13V, K20I, E35ED, M36I, R41K, H69K, K70R, V82I, L89M  
3443 3443 None    I13V, K14R, I15V, K20I, M36I, N37S, R41K, H69K, K70R, L89M, I93IF, F99FL  
3448 3448 None    L10V, I13V, I15V, E35D, M36I, P39S, R41K, I62V, L63X, I64V, E65D  
4187 4187 None    I15V, K20R, E35D, M36I, R41K, K45R, R57RK, D60DE, I62V, L63P, H69Q, I72IM, L89M  
5302 5302 None    N37A, I62V, L63P  
5303 5303 None    R41K, C67S, V77I  
5304 5304 None    L10I, E35D, R41K, L63LP, A71T, I93L  
5305 5305 None    E35D, N37D, R41K, L63T, A71V, I93L  
5306 5306 None    L10I, R57RK, I62V, A71AT  
5307 5307 None    I15IL, L19LV, E35D, N37D, R57RK, D60DE, Q61QE, I62IV, L63H, A71AT, I93L  
5308 5308 None    G16E, N37S, P39S, I62V, L63X  
5309 5309 None    T12S, K14R, I15IV, E35D, N37D, L63P, A71T  
5312 5312 None    I13V, K14R, G17E, K20I, E35Q, M36I, R41K, K45R, R57K, L63P, C67E, H69K, V82I, L89M  
5313 5313 None    I13V, K14R, K20I, E35ED, M36I, N37NS, R41K, H69K, L89M  
5314 5314 None    T12S, K14R, I15IV, E35D, N37D, L63P, A71T  
5316 5316 None    E35D, M36I, N37D, K43R, I62V, L63S, I64L, A71V, I93L  
5317 5317 None    E35D, L63P, H69Q  
5318 5318 None    P39X, I62V, L63P, V77I, I93L  
5319 5319 None    I13V, K14R, G17E, K20I, E35D, M36I, R41K, H69K, L89M  
5320 5320 None    L10X, I13IV, I15V, G16E, K20R, E35D, M36I, P39S, R41K, K45R, R57K, D60E, I62IV, L63T, H69Q, I72IT, L89M  
5321 5321 None    I13IV, G16E, K20R, E35D, M36I, R41K, H69K, V77VI, L89M, I93L  
5322 5322 None    T12S, I13V, L19I, K20KR, M36I, R41K, H69K, I72IM, T74S, L89M, I93L  
5323 5323 None    L10LI, T12TA, I13IV, K20R, M36I, N37X, D60E, I62V, L63P, I72V  
5325 5325 None    I13V, L33V, M36I, R41K, L89M  
5326 5326 None    I13V, L19P, K20I, M36I, N37D, R41K, L63P, H69K, K70R, L89M  
5327 5327 None    I15V, K20M, M36L, N37S, L63Q, I64V, E65D