<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Dennis (2017)
Title Rising prevalence of non-B HIV-1 subtypes in North Carolina and evidence for local onward transmission.
Citation Virus Evol
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 425
NumPts 425
Subtype B, C, CRF02_AG, A, D, CRF01_AE, G, CRF06_cpx, CRF45_cpx, H, CRF18_cpx, J, G + J, G + CRF02_AG, CRF09_cpx, CRF12_BF, CRF25_cpx


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Page 1   from Isolate 1 to Isolate 100 from Total 425 Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
NC_LC_1006 NC_LC_1006 Unknown Unknown   K20R, V35I, K49R, V60I, K122E, D123G, S162X, D177E, I178M, T200TI, Q207G, V245Q, D250E, A272P, K277R, L282C, I293IV, S322A, G335D, P345Q, F346X, R356K, A360T, T377Q, S379C, K390R, A400T  
NC_LC_1021 NC_LC_1021 Unknown Unknown   V35T, E36A, T39E, S48T, K122E, D123S, A158S, T165I, K173A, Q174K, D177E, I178IV, T200A, I202V, Q207E, R211K, V245Q, E248D, S251N, A272P, K275Q, T286A, E291D, V292I, I293V, D324E, I329L, G335D, F346H, A355S, R356K, G359T, K366R, T377Q, K395R  
NC_LC_1055 NC_LC_1055 Unknown Unknown   K49R, S162A, K173X, Q174E, D177E, T200A, E204Q, Q207E, F214L, V245Q, E248D, A272P, T286A, A288AT, I293V, P294T, S322T, G335GE, R356K, M357K, G359S, T369A, A371V, I375V, A376T, T386A, K390R, A400I  
NC_LC_1076 NC_LC_1076 Unknown Unknown  Y188L V35T, T39N, V60I, A98S, K104R, I135V, K173A, Q174K, T200A, Q207E, R211K, I244V, V245E, A272P, K281R, T286A, E291D, V292I, I293V, P294V, E297A, P321S, D324E, G335D, F346Y, R356K, M357R, R358G, G359S, A371V, K390R, A400T  
NC_LC_1084 NC_LC_1084 Unknown Unknown M184V  L34I, V35T, K43R, V60I, I135V, S162C, K173S, Q174K, D177E, T200A, Q207A, R211S, W212WR, V245Q, E248D, D250E, S251N, A272P, K281R, T286A, E291D, V292I, I293V, E297A, I329X, Q332QL, Q334L, G335D, F346Y, R356K, M357R, R358G, G359S, T369A, A371V, V381I, T386P, Q394R, A400T I309IS 
NC_LC_1093 NC_LC_1093 Unknown Unknown   V35T, E36A, T39E, S48T, K122E, D123G, I135T, K173X, D177E, T200A, Q207K, R211S, V245K, A272P, K277KR, E291D, V292I, I293V, Q334H, G335D, R356K, G359T, K366KR, A376AS, T377M, S379SC, K385R, K390R  
NC_LC_1097 NC_LC_1097 Unknown Unknown   V35K, E36A, T39E, S48T, K122E, D123G, I132IV, A158AS, S162C, K173A, D177E, T200A, Q207E, V245Q, S268SC, K281KR, E291D, V292I, I293V, G335D, R356K, R358K, G359N, T377L  
NC_LC_1102 NC_LC_1102 Unknown Unknown   P4X, E6ED, V35T, E40ED, K122Q, S162A, K173T, Q174K, D177E, T200A, Q207X, R211K, V245X, E248ED, S251I, T286A, E291D, V292I, I293V, P294T, S322T, G335D, R356K, M357R, G359S, A371V, I375V, A376S, K390R  
NC_LC_1122 NC_LC_1122 Unknown Unknown   P14A, V35K, T39E, S48T, K49R, A98S, K104KR, K122E, D123S, K173A, D177E, T200A, I202V, R211K, D237N, V245Q, D250E, S251C, A272P, K277R, L283I, E291ED, V292I, I293V, P294T, S322X, Q334H, G335D, R356K, M357R, G359T, I375IV, T377M, K390R, A400T  
NC_LC_1128 NC_LC_1128 Unknown Unknown   V35T, E36A, T39D, S48T, V60I, W88C, D121Y, K122E, I159IV, K166R, K173A, Q174K, D177E, T200V, Q207D, R211K, V245Q, D250E, T286A, E291D, V292I, I293V, Q334H, G335D, R356K, G359T, T377I, K390KR, A400T  
NC_LC_1131 NC_LC_1131 Unknown Unknown M184ML  V35T, E36D, K122E, D123DN, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, F214L, V245Q, L246M, A272P, K275KR, T286A, K287KR, E291ED, V292VI, I293V, P294T, S322T, I326V, G335D, R356K, M357K, G359S, T369A, A371V, I375V, A376T, K390R, A400T  
NC_LC_1132 NC_LC_1132 Unknown Unknown   V21VI, V35T, E36X, S68SG, K122E, D123X, S162A, K173V, Q174K, D177E, T200A, Q207E, V245Q, A272AT, K275R, K277Q, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357R, G359S, A371V, I375V, A376S, K390R  
NC_LC_1141 NC_LC_1141 Unknown Unknown   V35T, V60I, D123E, K173T, D177E, T200A, Q207A, V245Q, D250E, S251N, A272P, K277R, T286A, E291D, V292I, I293V, Q334H, G335D, R356K, A360T, V372L, T377H, S379C, K390R  
NC_LC_1151 NC_LC_1151 Unknown Unknown   V35T, V60I, D121Y, K122E, K173M, Q174K, D177E, T200A, Q207D, R211K, V245Q, E248D, D250E, T286A, E291D, V292I, I293V, A327AV, Q334L, G335D, F346Y, R356K, M357R, R358G, G359S, T386V, K390R, Q394R, A400V  
NC_LC_1168 NC_LC_1168 Unknown Unknown   V35T, T39TR, K122KE, D123DE, K173S, Q174K, D177X, V179VI, T200A, Q207A, V245Q, E248X, Q278Y, K281R, T286A, E291D, V292I, I293V, P294A, E312D, G335D, M357K, G359S, K366R, T369V, A371V, I375V, A376V  
NC_LC_1177 NC_LC_1177 Unknown Unknown   V35T, E40D, V60I, K104R, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, D237N, V245Q, A272P, K281R, T286A, I293V, P294T, S322T, G335D, R356K, M357K, G359S, A371V, I375V, A376AT, T377TI, K390R W266WC 
NC_LC_1182 NC_LC_1182 Unknown Unknown   V35T, E36D, I135V, S162A, K173T, Q174R, D177E, T200A, Q207X, L210LM, R211K, F214L, V245Q, A272P, T286A, I293V, S322A, I326V, G335D, R356K, M357K, G359S, T369A, A371V, I375V, A376T, A400T  
NC_LC_1184 NC_LC_1184 Unknown Unknown   V35T, V60I, K64R, K122KE, I135R, T139TI, K173T, Q174X, D177E, I178M, T200A, Q207X, V245K, E248D, D250E, A272P, E291D, V292I, I293V, K311R, P321S, D324E, Q334P, G335D, F346Y, R356K, M357R, R358G, G359S, L368LI, T386V, Q394R, A400V  
NC_LC_1196 NC_LC_1196 Unknown Unknown   V35T, T39A, E40D, K122E, D123N, S162C, K173T, Q174N, D177E, T200A, E204K, Q207E, P243PS, V245X, E248ED, D250DE, S251SN, T286A, E291D, V292I, I293V, P294T, S322X, D324DE, G335D, R356K, M357R, R358RK, G359S, A371V, K374R, I375A, T377H, K390R  
NC_LC_1202 NC_LC_1202 Unknown Unknown   K20KR, V35T, E36D, E53ED, K122KE, D123E, I135V, S162A, K173T, Q174E, D177E, I178X, T200A, Q207E, R211K, V245Q, A272S, V276VI, K277R, T286A, E291D, V292VI, I293V, P294T, S322T, I326V, G335D, R356K, M357R, R358K, G359S, A371V, I375V, K390R  
NC_LC_1221 NC_LC_1221 Unknown Unknown   K11S, V35T, T39A, E53D, D121H, K122E, D123S, I135T, K173T, Q174K, T200A, I202V, E204D, Q207T, R211K, V245Q, T286A, I293V, P294T, E312D, P321PS, D324DE, G335D, M357K, R358RK, G359S, K366R, T369TA, A371V, I375V, A376V, A400T  
NC_LC_1225 NC_LC_1225 Unknown Unknown   E6D, K11Q, E28A, K32E, V35T, T39K, K43E, V60I, D121H, K122E, D123S, K166R, K173I, Q174K, D177E, I202V, Q207A, R211S, V245E, K249Q, A272G, T286A, E291D, V292I, I293V, K311R, E312T, I326V, I329V, M357R, G359S, A371V, V381I, K390R, A400T  
NC_LC_1245 NC_LC_1245 Unknown Unknown   E6D, V35T, T39K, K43E, S68G, K102R, K103R, D123E, I135T, K173I, Q174K, D177E, V179T, T200A, Q207A, R211S, V245E, V276I, T286A, E291D, V292I, I293V, E297T, E312T, V317A, D324E, I326V, I329V, G335D, K350KR, M357K, G359S, K366R, T369A, A371V, I375L, A376V, T386A, K390R, K395R, A400T F389C 
NC_LC_1257 NC_LC_1257 Unknown Unknown   V35T, E36A, T39E, S48ST, K102R, K122KE, K173A, Q174K, Q207E, R211K, V245Q, S268C, A272P, V276T, E291D, V292I, E297A, Q334H, G335D, R356K, G359X, K366R, T369V, I375V, T377M, K390R, A400T  
NC_LC_1272 NC_LC_1272 Unknown Unknown   K104N, D123E, S162A, K173T, Q174K, D177E, T200A, Q207E, F214L, V245Q, L246M, S251SN, A272P, T286A, E291D, V292I, I293V, P294T, V317A, S322T, I326V, G335D, R356K, M357R, G359S, T369A, A371V, I375V, A376T, T386A, K390R, A400T  
NC_LC_1276 NC_LC_1276 Unknown Unknown   V35T, E36A, T39E, S48T, V60I, K122E, D123N, K173T, D177E, I178IL, T200A, Q207A, R211K, V245Q, D250E, A272P, K277R, T286A, E291D, V292I, I293V, Q334D, G335D, R356K, G359S, T377M, K390R, A400T  
NC_LC_1294 NC_LC_1294 Unknown Unknown   V35T, T39E, S48T, E53ED, K173X, D177E, I178M, T200A, Q207K, R211K, V245Q, A272P, K281KR, T286A, E291D, V292I, I293V, D324E, Q334X, G335E, R356K, G359X, T369A, A371AT, Q373X, K374KR, I375V, T377I, K390R, A400T  
NC_LC_1306 NC_LC_1306 Unknown Unknown M184V, N348I K103N, V106M V21I, V35K, T39E, S48T, K122E, D123S, K173A, D177E, G196R, Q197E, T200A, Q207E, R211K, V245Q, A272X, K277R, T286A, E291D, V292I, I293V, E297A, K311R, Q334H, G335D, R356K, M357MR, G359T, T377R, K390R, A400T K13KN 
NC_LC_1308 NC_LC_1308 Unknown Unknown   V35T, E36D, V60I, K122E, I135V, S162A, K173X, Q174K, D177E, I178M, T200A, Q207E, R211K, V245Q, L283LI, T286TA, A288AS, I293V, P294A, S322X, G335D, R356K, M357K, G359S, A371V, I375X, I380V, K390R, K395KR, E396D  
NC_LC_1312 NC_LC_1312 Unknown Unknown   V8VI, K11KQ, K22KR, V35X, T39TA, V60I, K122E, D123N, I135T, I142T, K173KN, D177E, I178M, T200I, Q207G, R211K, K238R, V245K, D250E, A272P, K277R, L282C, L283I, A288AS, V292I, I293V, E297EA, Q334H, G335D, P345Q, F346Y, R356K, R358RK, A360T, K366R, T377Q, S379C, K390R, E399D, A400T T286I 
NC_LC_1321 NC_LC_1321 Unknown Unknown M184V  V35T, E36EA, T39E, S48T, V60I, K122A, K173A, D177E, T200A, Q207A, R211RK, V245E, E248D, A272P, E291D, V292I, I293V, D324E, Q334H, G335D, R356K, M357R, G359T, T377M, K390R, A400T  
NC_LC_1332 NC_LC_1332 Unknown Unknown   V35T, V60VI, L109I, D121Y, K122E, S162A, K173T, Q174K, D177E, V189VI, T200A, Q207E, R211RK, P243T, V245Q, E248D, T286A, E291D, I293V, S322T, R356K, M357K, G359S, T369A, A371V, S379G, K390R, E399D, A400T  
NC_LC_1361 NC_LC_1361 Unknown Unknown M184V  K20R, K32X, V35T, T39K, E40D, K49R, V60I, K104R, D121Y, K122E, S162D, K166R, K173X, Q174QK, D177E, T200A, Q207E, R211K, V245Q, E248N, D250E, A272P, I274V, Q278H, K281R, T286A, E291D, V292I, I293V, E297T, L301M, I329V, Q334L, G335D, F346Y, M357R, R358G, G359S, A371L, S379G, T386V, Q394R, A400V D86DY 
NC_LC_1370 NC_LC_1370 Unknown Unknown M184V  V35T, E36D, T39K, D123E, I135T, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, K281R, I293V, P294T, L295M, S322T, I326V, G335D, R356K, M357K, G359S, T369A, A371V, I375V, A376S, T377M, K390R, K395R, A400T  
NC_LC_1387 NC_LC_1387 Unknown Unknown   V8VI, K11KE, V35T, V60I, K103X, D121DY, K122E, D123G, I135T, K173L, Q174K, D177E, V179I, T200A, Q207A, R211N, V245L, A272P, T286A, E291D, V292I, I293V, G335D, R356K, M357K, R358G, G359S, A360T, D364DE, E370EG, A371V, A376V, T377X, S379SG, T386TI, A400T  
NC_LC_1393 NC_LC_1393 Unknown Unknown   P9S, E28K, V35T, K49R, K122R, D123E, I135V, I142IT, S162A, E169Q, K173T, Q174E, D177E, I178V, T200A, Q207E, V245H, K281R, T286A, E291D, I293V, P294A, S322T, I326V, G335D, R356K, M357K, G359S, V365I, A371V, I375V, K390R, I393V  
NC_LC_1395 NC_LC_1395 Unknown Unknown   P4S, V35X, E36A, T39E, G45GE, S48T, K173X, T200A, Q207E, D250E, S251D, A272P, K277R, T286A, E291D, V292I, I293V, Q334H, G335D, R356K, G359T, T377M, K390R, A400T  
NC_LC_1397 NC_LC_1397 Unknown Unknown   V35T, T39S, K49R, D123N, S162A, K173T, Q174K, D177E, T200A, Q207E, F214L, V245Q, E248D, A272P, K277KR, T286A, I293V, P294T, S322T, I326V, G335D, R356K, M357K, G359S, T369A, A371V, I375V, A376X, T386A, K390R, A400I  
NC_LC_1404 NC_LC_1404 Unknown Unknown   P4K, V35T, T39E, S48T, V60I, K122E, D123S, I135T, S162C, K166R, K173A, D177E, T200A, Q207E, R211K, V245X, E248ED, A272P, K277R, T286A, E291D, I293V, Q334N, G335D, R356K, M357R, R358K, G359A, T377M, K390R, A400T  
NC_LC_1406 NC_LC_1406 Unknown Unknown   V35T, V60I, K102Q, K122KE, D123DN, I135IV, I142IV, K173T, Q174K, D177E, I178X, T200A, Q207X, V245Q, E248D, D250E, S251X, K281R, T286A, E291D, I293V, P294T, S322T, I326V, G335D, I341IV, R356K, M357R, G359S, A371V, I375V, T377M, K390R, K395R  
NC_LC_1426 NC_LC_1426 Unknown Unknown  K103N V35T, E36D, W88C, K122E, D123N, E138A, T139S, S162C, K173T, Q174K, T200A, I202IV, Q207D, R211K, F214L, V245X, E248N, A272P, K277R, T286A, E291D, V292I, I329L, G333E, Q334H, R356K, G359T, T377X, K390R, E399D, A400T  
NC_LC_1474 NC_LC_1474 Unknown Unknown  K101E E6D, V35T, E36Q, T39K, K43E, K122E, D123N, I135T, E138G, K173I, Q174K, I178M, V179I, T200A, Q207A, R211S, V245D, E248Q, A272P, K277R, T286A, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T  
NC_LC_1483 NC_LC_1483 Unknown Unknown   V35T, V60I, K122Q, I135V, S162A, K173T, Q174N, D177E, Q197L, T200E, Q207E, V245Q, E248D, K281KR, T286A, E291D, V292I, I293V, P294T, S322A, D324E, G335D, R356K, M357K, G359S, K366KR, T369A, A371V, I375V, T377R, W383G, K390R, K395R V381K, I382R 
NC_LC_1495 NC_LC_1495 Unknown Unknown   V21VI, V35T, V60I, K104KR, K122X, D123S, I135V, S162A, K173T, Q174K, D177E, T200E, I202IV, Q207E, R211RK, K223KR, V245Q, S251SN, T286A, E291D, V292I, I293IV, P294T, E297EK, I326V, G335D, R356K, M357K, G359S, K366R, T369V, A371V, I375X, A376AT, T377X, V381VI, K390R, K395R, E396ED P140PA 
NC_LC_1504 NC_LC_1504 Unknown Unknown   K20KR, V35T, E36A, T39E, S48T, V60VI, A158S, K173X, Q174X, D177E, T200A, Q207X, R211K, P243T, V245Q, A272S, K277R, T286A, E291D, V292I, I293V, G335D, F346H, R356K, G359T, T377X, K390R, E399ED, A400T L149LF 
NC_LC_1517 NC_LC_1517 Unknown Unknown   V35T, E36A, T39E, K122KE, I142X, A158S, K173A, I178IL, T200A, I202IV, Q207G, R211K, V245Q, P247X, A272P, K277R, T286TA, E291D, V292I, I293V, Q334H, G335D, R356K, G359T, T386I, K390R, A400T  
NC_LC_1526 NC_LC_1526 Unknown Unknown  K103N V8VI, V35T, E36A, T39D, K122E, D123S, K173A, N175NH, T200A, E204EK, Q207E, R211K, V245Q, A272K, K277R, E291D, V292I, I293V, E297A, K311KR, Q334H, G335D, R356K, G359T, T377L, K390R  
NC_LC_1546 NC_LC_1546 Unknown Unknown   K22R, V35K, T39A, V60I, K122E, D123S, I135T, I142T, D177E, I178M, G196E, T200X, Q207E, R211K, K238R, V245E, D250E, A272P, K277R, L282C, L283I, T286V, V292I, I293V, D324E, Q334H, G335D, P345Q, F346Y, R356K, M357T, A360T, T377Q, S379C, K390R, E399D, A400T  
NC_LC_1553 NC_LC_1553 Unknown Unknown M184V, T215Y, N348I Y181C K11T, V35T, K49R, V60I, D121Y, K122E, D123E, I135T, T139R, I142V, F171Y, D177E, T200I, Q207E, R211K, V245K, D250E, A272P, K277R, L282C, L283I, G335D, P345Q, F346Y, K347R, R356K, G359S, A360T, A376AS, T377R, S379C, K390R  
NC_LC_1555 NC_LC_1555 Unknown Unknown   K20KR, T27TS, V35X, E36A, T39E, E40D, S48T, K122E, D123X, A158S, K173A, Q174QK, D177DE, T200X, Q207X, L210LF, V245Q, D250DE, A272P, K277KR, T286A, E291D, V292I, I293V, V317A, S322A, Q334N, G335D, K347KR, A355S, R356E, M357R, G359T, E370G, T377L, K390R, A400AV  
NC_LC_1569 NC_LC_1569 Unknown Unknown T215A K103N P4H, K11T, V35T, T39K, K43E, S68G, D121Y, K122E, D123DG, K173S, Q174K, D177E, Q207E, R211S, V245Q, E248N, A272P, I293V, E312N, G335D, M357K, G359S, K366R, I375V, T377I, K390R, K395R, A400T N348K 
NC_LC_1583 NC_LC_1583 Unknown Unknown   V35T, E36D, T39I, V60I, K122E, I135V, A158S, S162A, T165I, K173X, Q174K, D177E, V189VI, T200A, Q207E, R211K, F214L, P243A, V245X, D250DN, Q278H, T286A, E291D, V292I, I293V, S322T, I326V, G335D, R356K, M357R, R358G, G359S, A360V, K366KR, T369V, A371V, I375V, A376S, T377R, K390R  
NC_LC_1587 NC_LC_1587 Unknown Unknown   E6D, V35T, T39K, K49R, V60I, K122E, D123S, Q174R, D177E, I178M, T200I, Q207G, R211K, V245K, D250E, K277R, L282C, L283I, T286A, I293V, P345Q, F346Y, A360T, A371T, A376S, T377Q, S379C, K390R, E399G, A400T  
NC_LC_1589 NC_LC_1589 Unknown Unknown M41L  K11T, V35T, V60I, D123S, K173R, Q174R, D177E, G196E, T200A, Q207E, R211K, V245Q, D250E, K277R, T286A, E291D, V292I, I293V, E297A, V317A, S322L, F346H, M357I, R358K, G359S, T377L, T386I, A400T  
NC_LC_1591 NC_LC_1591 Unknown Unknown   K11X, V35T, T39A, V60I, D121H, K122E, D123S, I142V, K173L, Q174K, D177E, I178L, V179I, T200A, E204D, Q207X, R211K, E248D, A272P, K275Q, K277R, T286A, E291D, I293V, P294T, E312D, I326V, G335D, M357K, G359S, K366R, A371V, I375V, T377M, A400T  
NC_LC_1607 NC_LC_1607 Unknown Unknown   E6D, V35T, T39K, V60I, K122E, D123X, S162C, Q174K, D177E, I178M, E203ED, Q207X, R211RS, K238R, V245E, A272S, T286A, I293V, L310I, E312T, V317A, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T  
NC_LC_1611 NC_LC_1611 Unknown Unknown   V35T, V60I, D121Y, K122E, D123E, I135T, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, V245E, V261I, K281R, T286A, I293V, P294T, G335D, M357K, G359S, K366R, T369A, A371V, I375V, A376V, T377M, A400T  
NC_LC_1613 NC_LC_1613 Unknown Unknown   V35T, V60I, D121H, K122E, K166X, K173A, Q174K, D177E, I178L, V179I, T200A, Q207D, R211K, V245K, D250E, A272P, T286A, E291D, V292I, I293V, E312D, A327V, I329IV, G335D, M357R, G359S, K366KR, A371V, I375T, A376T, T377M, S379C, K395R I167IL 
NC_LC_1614 NC_LC_1614 Unknown Unknown   E6EK, K11KQ, K20R, V35T, T39M, V60I, K122E, D123N, I135T, I142IV, S162Y, K173L, Q174K, D177E, V179I, T200TA, Q207E, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, I293V, E297T, Q334D, F346Y, A355G, M357I, R358K, G359S, T377Q, K390R, E399D, A400T  
NC_LC_1616 NC_LC_1616 Unknown Unknown M184I  K32R, V35T, E36A, T39E, K102KR, K122E, K173A, D177E, I178L, T200A, E204K, Q207E, V245Q, D250E, A272P, K277R, T286A, E291D, V292I, I293V, Q334N, G335D, F346H, R356K, G359T, T377X, K390R  
NC_LC_1632 NC_LC_1632 Unknown Unknown   V35T, E36A, T39E, S48T, V60I, K122E, D123S, K173A, D177E, Q197L, T200A, Q207E, V245E, A272P, T286A, E291D, V292I, I293V, S322A, Q334H, G335D, R356K, M357R, R358K, G359T, T377M, S379G, K390R, A400T G352GW 
NC_LC_1636 NC_LC_1636 Unknown Unknown T215S  V35T, T39X, V60I, S68G, K122E, I135V, S162A, K173X, Q174K, D177E, I178X, T200A, Q207E, R211RK, P243H, V245E, A272P, L283LI, T286A, E291D, V292I, I293V, P294T, E297EK, A304AT, S322T, I326V, G335D, R356K, M357K, G359S, K366R, T369V, A371V, I375A, K390R, K395R, E396D  
NC_LC_1642 NC_LC_1642 Unknown Unknown   V35T, E40D, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, T200I, Q207A, R211S, F214L, V245Q, S251I, A272P, K275R, T286A, E291D, V292I, I293V, P294T, E312D, G335E, M357K, G359S, K366R, T369A, A371V, I375V, A376T, T377R, S379A, K388R, A400T K374I, G384E 
NC_LC_1668 NC_LC_1668 Unknown Unknown   V35T, T39M, V60I, D121H, K122E, I135T, K173X, Q174K, D177X, V179I, T200TA, Q207A, R211S, V245Q, D250E, T286A, E291D, V292I, I293V, P294T, E312D, G335D, M357K, R358K, G359S, K366R, E370ED, A371V, I375V, A376V, T377M, K390R, E399ED, A400T  
NC_LC_1669 NC_LC_1669 Unknown Unknown   E6N, V35T, V60I, K122E, D123S, I135T, S162X, K173S, Q174K, D177E, I178M, V179I, T200TK, Q207A, R211S, D250E, S251D, A272P, K275Q, T286A, E291D, V292I, I293V, P294T, L295M, E300Q, E312D, S322T, G335D, M357Q, G359S, T369A, A371V, I375V, T377M, A400T  
NC_LC_1670 NC_LC_1670 Unknown Unknown   K32E, V35K, E36A, T39E, S48T, K104R, K122E, D123S, I135T, I142IT, K173A, Q174K, D177E, G196E, T200A, Q207D, R211K, V245Q, A272P, K277R, T286TA, E291D, V292I, I293V, Q334Y, G335D, R356K, M357R, G359A, T377Q, K390R  
NC_LC_1680 NC_LC_1680 Unknown Unknown   V35T, E36A, T39E, S48T, K173I, Q174K, D177E, T200A, Q207E, R211K, V245Q, A272P, K277R, K281R, T286TA, E291D, V292I, I293V, P294PS, Q334QH, G335D, R356K, G359T, K366R, T377M, K390R, A400AT  
NC_LC_1682 NC_LC_1682 Unknown Unknown M41L, D67N, M184V, L210W, T215Y K238KT, Y318YF V35T, T39E, E44D, S48T, E53D, V60VI, V118VI, K122E, D123DN, I135V, K166R, D177E, Y188X, T200A, Q207X, R211K, V245Q, D250E, A272AS, K277R, T286A, E291D, V292I, I293V, P294T, R307K, S322A, Q334H, G335D, P345PQ, K350KR, R356K, G359T, V365VI, A371V, T377M, K390R, A400T  
NC_LC_1695 NC_LC_1695 Unknown Unknown   V21VI, V35T, T39R, K43E, V90I, S162A, K173A, Q174K, D177E, I178M, T200A, Q207E, V245Q, T286A, E291D, V292I, I293V, P294T, S322A, I326V, G335D, Y342F, R356K, M357K, R358RK, G359S, A360AT, A371V, I375V, A376AS, S379SG, T386TI, K390R  
NC_LC_1697 NC_LC_1697 Unknown Unknown   K11T, K32KR, V35T, E36A, T39E, K43R, S48T, D123X, K173I, Q174K, I195L, T200A, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, I309V, Q334N, G335D, R356K, M357L, G359A, T377X, K390R, A400T  
NC_LC_1703 NC_LC_1703 Unknown Unknown   V21I, V35T, E36D, V60I, D123E, I135R, S162A, E169D, K173I, Q174K, D177E, I178V, T200A, Q207E, V245Q, E248D, A272P, K277R, T286A, E291D, V292I, I293V, E297A, G333E, F346H, M357I, R358K, G359T, T377Q, K390R, A400I  
NC_LC_1730 NC_LC_1730 Unknown Unknown   V35T, E36A, T39E, E40D, S48ST, V60I, V90I, K122E, D123S, I142T, S162C, K173T, Q174K, D177E, T200A, E203ED, Q207E, R211K, V245K, E291D, V292I, I293V, P294T, Q334N, G335D, K347KR, R356K, M357R, G359A, T377M, K390R, A400T  
NC_LC_1734 NC_LC_1734 Unknown Unknown   E6N, K11T, K32R, V35T, E36D, S68G, T69A, K122T, K126R, S162Y, K173S, D177E, V189I, Q207A, R211K, F214L, P243T, V245Q, D250E, A272P, T286A, E291D, I293V, P294I, E297EK, V314I, G335D, R356K, M357K, G359S, T369V, A371V, I375V, A376V, S379G, E399D, A400T L234LP 
NC_LC_1738 NC_LC_1738 Unknown Unknown   E6ED, K11T, E28EA, V35T, T39K, K43E, S68G, T69N, K122E, D123X, I135T, K166R, K173I, Q174K, D177E, I178M, T200E, Q207A, R211S, V245E, A272AP, V276VI, T286TA, E291ED, V292VI, I293IV, E297EA, E300EQ, E312T, S322SA, I326V, I329V, G335D, Y342F, M357K, G359S, K366R, T369A, A371V, K395R, A400T  
NC_LC_1745 NC_LC_1745 Unknown Unknown M184V  K20R, V35T, E36Q, T39A, K43E, D121H, K122E, S162C, K173X, Q174K, D177DE, G196E, T200R, Q207E, L210LS, R211K, V245Q, D250E, S251D, A272P, T286A, E291D, V292I, I293V, E297K, P321S, S322G, D324E, I329V, Q334L, G335D, R356K, M357R, G359S, T369A, A371V, T377L, K390R, A400T  
NC_LC_1746 NC_LC_1746 Unknown Unknown   V35T, T39A, V60I, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, Q207A, R211S, V245K, D250E, S251H, T286A, E291D, V292I, I293V, P294Q, E312D, G335D, M357K, G359S, I375V, A376V, T377M, T386I, K390R, E399D, A400T  
NC_LC_1782 NC_LC_1782 Unknown Unknown   V35T, T39M, V60I, D121H, K122E, I135T, I142IV, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, P243PS, V245Q, E248D, D250DE, T286A, E291D, V292I, I293V, P294PT, E312D, G335D, M357K, R358RK, G359S, K366R, T369TA, A371V, I375V, A376V, T377M, K390R, A400T  
NC_LC_1793 NC_LC_1793 Unknown Unknown D67N, K70R, L74V, V75M, M184V, K219Q L100I, K103N V10VI, K11X, E28EK, V35T, T39A, E40D, V60I, T69TN, K102R, T107S, D121H, K122E, D123S, S162C, D177E, I178L, T200A, E203K, Q207E, R211K, D218E, P243T, V245T, A272P, T286A, E291D, V292I, E297K, K311R, V314I, V317A, G335D, R356K, G359T, V365I, A376V, T386M, K390R, A400T  
NC_LC_1811 NC_LC_1811 Unknown Unknown   M16MV, V35T, T39TA, E40D, K49R, I50IV, V60I, W88C, K122E, D123DN, I135T, Q145C, K173S, Q174K, D177DE, V179T, T200A, Q207A, R211S, F214L, V245T, E248ED, D250E, S268C, A272S, K275R, T286A, I293V, P294T, E312D, G335D, R356G, M357K, R358K, G359A, A371L, I375V, A376V, T377M, V381X, K390R, A400T  
NC_LC_1821 NC_LC_1821 Unknown Unknown   K20R, V35T, T39K, E40D, K49R, K122E, D123E, S162A, K173T, Q174R, D177E, T200A, I202V, Q207E, R211K, F214L, P243T, V245Q, K277R, L283I, T286A, I293V, P294T, L295M, K311R, S322T, I326V, G335D, I341IL, F346Y, R356K, M357R, G359S, V365I, A371L, T377L, K390R, A400T  
NC_LC_1833 NC_LC_1833 Unknown Unknown   P4S, V35T, E36D, T39K, S68G, V106I, K122KT, I135V, S162A, K173T, Q174K, D177E, V189I, T200TA, Q207E, R211K, F214L, V245E, K249KR, S251SI, T286A, E291D, I293V, P294T, S322T, G335D, F346Y, M357K, G359S, K366R, T369V, A371V, I375V, A376V, A400T A267G 
NC_LC_1843 NC_LC_1843 Unknown Unknown   V35T, E36A, T39E, S48T, D121H, K122E, D123G, K173T, D177E, I178L, T200R, Q207E, R211K, V245Q, D250T, A272P, K277R, T286A, E291D, V292I, I293V, D324E, Q334C, G335D, R356K, G359T, T377M, T386I, K390R, A400T W383K 
NC_LC_1844 NC_LC_1844 Unknown Unknown   V35T, E36EA, T39D, S48T, V90VI, K122E, D123DN, T165TI, K173T, Q174QK, T200X, Q207X, R211RK, V245Q, A272P, K277S, T286A, E291D, V292I, I293V, G335D, F346H, R356K, M357R, G359T, T377L, K388KR, K390R  
NC_LC_1851 NC_LC_1851 Unknown Unknown L74V, M184V K103N, Y181C K20R, V35K, D123E, S162A, K173T, Q174K, T200A, Q207T, R211K, H221Y, V245Q, E248D, D250G, T286A, E291D, I293V, P294T, S322T, G335D, R356K, M357R, G359S, T369A, A371V, I375A, V381I, K390R, K395R, E399ED, A400T  
NC_LC_1869 NC_LC_1869 Unknown Unknown   E6D, K11A, V35T, T39K, K43E, K122E, D123S, I135V, S162C, K173R, Q174K, D177E, T200R, Q207A, K238R, V245E, K249R, T286A, E291D, V292I, I293V, K311R, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, K395R, A400T  
NC_LC_1876 NC_LC_1876 Unknown Unknown K65R Y181C, G190A V8I, K20R, V35T, E36A, T39E, S48T, K122E, D123S, I135T, K173A, G196K, T200A, E203Q, Q207E, V245Q, D250E, A272P, K277KR, L279M, T286A, E291ED, V292I, I293V, E297EA, Q334D, G335D, R356K, G359T, V365VI, I375IV, T377X, T386TI, K390R  
NC_LC_1885 NC_LC_1885 Unknown Unknown   K20R, V21I, V35T, T39A, E40D, V60I, K122E, S162C, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, K238R, V245Q, E248N, A272P, K277R, T286A, E291D, I293V, E297T, D324E, Q334H, G335N, P345A, F346H, R356K, M357V, R358K, G359S, V365I, T369V, S379G, K390R, A400T  
NC_LC_1886 NC_LC_1886 Unknown Unknown   V35T, K49KR, V60VI, T165I, K173T, Q174R, D177E, I178M, T200A, Q207E, R211K, V245Q, E248D, D250E, A272P, K277R, T286A, E291D, V292I, I293V, E297T, I329V, Q334X, G335D, F346Y, R356K, M357R, R358G, G359S, T386V, Q394R, A400V  
NC_LC_1897 NC_LC_1897 Unknown Unknown   K11Q, T27S, V35T, V60I, K122E, D123G, I135T, K173A, Q174K, I178M, V179I, Q197K, T200TA, I202V, Q207E, V245E, D250E, A272P, T286A, E291D, E312D, V317VA, G335D, M357R, G359S, K366KR, T369TA, A371V, I375V, A376V, T377X, A400T  
NC_LC_1903 NC_LC_1903 Unknown Unknown   P4T, V35T, E36A, T39E, E40D, K49R, K122E, T139A, A158S, K173T, Q174K, T200X, I202V, Q207E, R211K, F214L, V245Q, E248D, A272P, K277R, E291D, V292I, I293V, V317VA, Q334N, G335D, R356K, M357R, G359T, T377Q, K390R  
NC_LC_1919 NC_LC_1919 Unknown Unknown   K11Q, T27S, V35T, V60I, T69N, K122E, D123G, I135T, K173A, Q174K, D177E, I178IM, V179I, Q197K, I202V, Q207E, R211X, F214L, V245E, D250E, A272P, R284K, T286A, E291D, E312D, V317A, G335D, M357R, R358RK, G359S, A360AT, A371V, I375V, A376V, T377L, A400T  
NC_LC_1924 NC_LC_1924 Unknown Unknown   V35T, E36A, T39E, S48T, V60I, I135R, E169D, K173A, D177E, Q197K, T200A, Q207E, V245Q, A272P, K277R, K281R, T286A, E291D, V292I, I293V, E297A, V317A, Q334QH, G335GD, R356K, G359T, A376S, T377M, K390R, A400T  
NC_LC_1927 NC_LC_1927 Unknown Unknown   V21I, K32R, V35T, E40D, K49KR, V60I, W88S, K122E, D123N, K173R, Q174N, D177E, V189I, G196E, T200I, Q207E, R211K, V245H, P247Q, A272P, T286A, E291D, V292I, I293V, E297A, F346H, M357I, R358K, G359S, I375V, T377L, S379A, K390R, A400T  
NC_LC_1930 NC_LC_1930 Unknown Unknown   E6T, V35T, T39A, K122E, D123A, I135T, S162Y, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S, V245E, E248D, A272P, E291D, V292M, I293V, E312N, G335D, F346L, M357K, G359S, K366R, T369A, I375V, A376S, T377M, K388R, A400T  
NC_LC_1952 NC_LC_1952 Unknown Unknown   V21I, V35T, E40D, K49R, E53D, V60I, V90I, D121Y, K122E, S162C, D177E, Q207E, R211K, V245Q, D250E, Q278N, I293V, I329V, Q334N, Y342F, M357X, T386I, K390R, E399D, A400T  
NC_LC_1955 NC_LC_1955 Unknown Unknown   E6EK, T7TA, K11T, V35T, E36D, K49R, V60I, A98S, D121Y, K122E, D177E, I178M, Q207E, R211K, A272S, K277R, L282C, L283I, I293V, G335D, P345Q, F346H, R356K, M357V, A360T, T377Q, S379C, K390R, A400I  
NC_LC_1957 NC_LC_1957 Unknown Unknown   V8I, V35T, E36A, T39E, S48T, K102R, K122E, I135IV, E138A, K166KR, K173T, Q174QK, D177N, T200A, Q207D, R211K, D250E, A272S, K277R, T286A, A288S, E291D, V292I, I293V, S322SA, I329V, Q334H, G335D, R356K, G359T, T377L, K390R, A400T  
NC_LC_1969 NC_LC_1969 Unknown Unknown   P4T, K11KT, V35T, T39N, K82R, V118I, D121H, K122E, T139X, I142T, A158S, T165I, Q174X, D177DE, T200A, Q207E, R211K, F214L, V245E, K281R, L283I, V292I, I293V, E297K, A304E, E312T, G335D, R356K, M357K, G359S, A360T, A371V, I375V, T377M, K390R, A400T  
NC_LC_1995 NC_LC_1995 Unknown Unknown D67DN V179E, Y181C P9T, V35T, E36D, T39TA, S48E, K64KR, S68SR, T69N, D86DN, W88WG, K102R, K103KR, S117SP, D121DN, D123X, R125RK, S134SR, I135V, S162A, K173X, Q174X, D177E, I178M, T200A, Q207E, R211K, F214L, K223T, L228R, V245X, E248X, K275R, K277KR, T286A, E291D, V292I, I293V, P294T, H315F, S322X, G335D, R356K, M357K, G359S, A371V, I375V, T377V, K390R W71WG, R72RK, D76DN, R78RK, E79EK, E89EK, V90VA, D113DN, L120L* 
NC_LC_1997 NC_LC_1997 Unknown Unknown M184V  V35T, T39E, S48T, K122E, D123S, I135T, K173A, Q174R, D177E, T200E, Q207E, R211K, P243T, V245Q, E248D, A272S, T286A, E291D, V292I, I293V, Q334H, G335D, R356K, G359T, T377M, K390R, A400T C38Y