<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Svard (2017)
Title Drug resistance testing through remote genotyping and predicted treatment options in human immunodeficiency virus type 1 infected Tanzanian subjects failing first or second line antiretroviral therapy.
Citation PLoS ONE
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 82
NumPts 82
Subtype A, C, D, B, CRF10_CD

 

Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
1st_1 1st_1 None    I13V, I15V, E35D, M36I, R41K, R57K, L63P, H69K, L89M  
1st_108 1st_108 None    I13V, E35D, M36I, R41K, K45R, R57K, L63A, H69K, L89M  
1st_109 1st_109 None    T12I, I13V, G16X, M36I, R41K, I64V  
1st_14 1st_14 None    T12Q, I15V, L19I, M36I, R41K, H69K, T74S, L89M, I93L  
1st_18 1st_18 None    I13V, I15V, M36I, N37D, R41K, L63T, I64V, E65X, I72V  
1st_19 1st_19 None    E35D, M36I, R41K, K45R, R57K, L63S, H69K, V77I, L89M  
1st_20 1st_20 None    M36I, R57K, L63P, I72V, L89M  
1st_27 1st_27 None    T12S, I15V, L19I, K20R, M36I, R41K, I62V, H69K, T74A, L89M, I93L  
1st_28 1st_28 None    I13V, E35D, M36I, R57K, Q61H, H69K, L89M  
1st_3015 1st_3015 None    L10I, I13V, E35D, M36I, R41K, R57K, L63T, H69K, L89M  
1st_3016 1st_3016 None    I13V, E35D, M36I, N37ND, I62IV, L63P, H69K, L89M  
1st_3022 1st_3022 None    L10V, I13V, K14R, G16E, E35D, M36I, R41K, H69K, L89M  
1st_3023 1st_3023 None    I13V, Q18QH, E35N, M36I, N37D, R41K, H69K, L89M  
1st_3027 1st_3027 None    L10I, I13V, K14R, E35D, M36I, R41K, R57K, L63P, H69Q, K70R, L89M  
1st_3032 1st_3032 None    I13V, M36I, R41K, R57RK, L63T, I64V, E65D, I72V  
1st_33 1st_33 None    T12S, I15V, L19I, K20R, M36I, N37R, P39T, R41N, L63P, H69K, L89M, I93L  
1st_36 1st_36 None    I13V, K20R, E35D, M36I, R41K, R57K, L63P, H69K, L89M  
1st_37 1st_37 None    I13V, I15V, M36I, R57K, L63Q, I64V, I72V  
1st_38 1st_38 None    K14R, I15V, L19I, N37K, R41N, H69K, V77I, L89M, I93L  
1st_39 1st_39 None    L10I, T12S, L19I, M36I, R41K, L63V, H69K, T74S, L89M, I93L  
1st_41 1st_41 None    L33V, R41K, D60E, L63P, I72V  
1st_45 1st_45 None    K20R, M36I, R41K, H69K, L89M, I93L  
1st_47 1st_47 None    L10I, I13V, E35D, M36I, R41K, K45R, R57K, L63P, C67S, H69K, L89M  
1st_50 1st_50 None    I13V, R41K, L63P, I64V, H69Y, I72E, V77I  
1st_55 1st_55 None    I13V, E35D, M36I, P39Q, R41K, K45R, R57K, L63P, H69K, L89M  
1st_56 1st_56 None    K14R, I15V, K20R, E35D, M36I, N37E, R41K, R57K, H69K, L89M  
1st_57 1st_57 None    T12S, I15V, L19E, M36I, N37D, L63P, H69K, I93L  
1st_58 1st_58 None    I13V, M36I, R41K, I62V, L63P, I64V, H69Y  
1st_65 1st_65 None    L10I, I13V, E35D, M36I, R41K, R57K, L63P, H69K, V77I, L89M  
1st_68 1st_68 None    I13V, G16E, E35D, M36I, R41K, K45R, R57K, H69K, K70R, L89M  
1st_71 1st_71 None    I13V, E35D, M36I, N37D, R41K, R57K, D60E, I62V, L63P, H69K, K70R, L89M  
1st_72 1st_72 None    T12S, I15V, G16E, L19I, M36I, R41K, H69K, L89M, I93L  
1st_73 1st_73 None    L10I, I13V, E35D, M36I, N37D, R41K, D60E, Q61E, L63X, E65D, H69K, L89M  
1st_74 1st_74 None    L10I, I13V, E35D, M36I, N37E, K45KR, R57K, L63V, H69K, K70R, L89M  
1st_76 1st_76 None    T12S, I15V, L19T, K20R, M36I, R41K, L63T, H69K, I72IL, L89M, I93L  
1st_79 1st_79 None    I13V, E35D, M36I, N37D, R41K, H69K, L89M  
1st_8 1st_8 None    T12L, G16E, L19I, E35D, M36I, R41K, R57K, I62IV, L63T, H69K, I72T, V77I, L89M  
1st_80 1st_80 None    I13V, K14R, E35D, M36I, R41K, K45R, R57K, L63P, H69K, L89M  
1st_84 1st_84 None    K20R, M36I, R41K, L63P, I64V, I72V  
1st_88 1st_88 None    T12S, I15V, L19T, K20R, E35D, M36I, N37D, R41K, R57K, D60E, E65D, H69K, L89M  
1st_90 1st_90 None    I13V, K14KR, K20R, E35ED, M36I, N37D, R41K, H69K, L89M  
1st_92 1st_92 None    I13V, M36I, R41K, D60E, I62V, I64V, K70R  
1st_96 1st_96 None    T12S, I15V, G16E, L19I, M36I, Q61E, H69K, K70R, L89M, I93L  
2nd_2004 2nd_2004 LPV 15   I15V, R41K  
2nd_2005 2nd_2005 LPV   L33V, N37K, R41N, K45R, D60E, L63P, H69K, I72E, L89M, I93L  
2nd_2015 2nd_2015 LPV   L10V, I13V, G16E, E35D, M36I, R41K, R57K, H69K, K70R, L89M  
2nd_2017 2nd_2017 LPV 15   T12S, I15V, L19X, K20R, M36I, R41K, Q61E, H69K, L89M, I93L  
2nd_2021 2nd_2021 LPV 24   K20R, M36I, R41N, D60E, I62V, H69K, L89M, I93L  
2nd_2023 2nd_2023 LPV 19 V82A  I15V, M36I, R41K, L63S, I64V, I72V  
2nd_2025 2nd_2025 LPV 19   T12S, K14KR, I15V, G16A, M36I, R41H, D60E, H69K, L89M, I93L  
2nd_2027 2nd_2027 LPV 15 V32I, I47A  T12S, L19I, K20R, E35D, M36I, R41K, K45R, R57K, I62V, L63P, C67D, H69K, V77I  
2nd_2028 2nd_2028 LPV 21   E35D, M36I, P39T, R41K, K45KR, L63P, I64V  
2nd_2030 2nd_2030 LPV   I13V, K20R, E35D, M36I, R41K, R57K, L63A, H69K, L89M  
2nd_2033 2nd_2033 LPV 142   I13V, R41K, Y59H, Q61N, I64V, V77I  
2nd_2034 2nd_2034 LPV 121   L10I, I13V, G16E, K20R, E35D, M36I, R41K, R57K, L63T, E65D, H69K, L89M, I93L  
2nd_2035 2nd_2035 LPV 198   L10I, I13V, G16E, E35D, M36I, R41K, R57K, H69K, K70R, L89M  
2nd_2039 2nd_2039 LPV 12   E35D, M36I, N37D, R41K, K45R, R57K, D60E, L63V, H69K, L89I  
2nd_2042 2nd_2042 LPV 69   T12S, I15V, G16A, L19V, M36I, R41K, H69K  
2nd_2044 2nd_2044 LPV 159   L10I, I13V, G16E, K20R, E35D, M36I, R41K, H69K, V75VI, L89M  
2nd_5008 2nd_5008 LPV 252   L10V, I13V, E35D_IN, M36L, R41K, K45R, R57K, L63P, H69K, K70R, L89M  
2nd_5009 2nd_5009 LPV 215   I13V, E35D, M36I, R41K, K45R, R57K, L63S, H69K, L89M  
2nd_5016 2nd_5016 LPV 57   L10V, I13V, G16E, K20R, E35D, M36I, R41K, K45R, R57K, L63S, H69K, K70R, L89M  
2nd_5017 2nd_5017 LPV 22   I13V, E35D, M36I, R41K, R57K, H69K, L89M  
2nd_5019 2nd_5019 LPV 328   T12P, K14R, L19S, R41K, A71T, I72V, V77I  
2nd_5020 2nd_5020 LPV 108 M46I, I54V, V82A L10F, K43T I13V, L19I, A22V, E35D, M36I, R41K, R57K, Q61N, L63P, H69K, K70R, L89I, T91S  
2nd_5022 2nd_5022 PI    T12S, I15V, L19I, M36I, R41K, L63P, H69K, I72M, L89M, I93L  
2nd_5023 2nd_5023 LPV    L10I, E35D, M36I, R41K, R57K, L63V, H69K, L89M  
2nd_5045 2nd_5045 RTV, ATV 10   T12A, I13V, K14KR, E35D, M36I, N37D, R41K, K45R, R57K, L63S, H69K, L89M  
2nd_5047 2nd_5047 PI    T12S, I15V, N37K, R41N, L63P, H69K, V77I, I93L  
BL_4001 BL_4001 None    L10V, I13V, K14KR, G16E, K20I, E35D, M36I, R57K, L63A, H69K, L89M T12G 
BL_4002 BL_4002 None    T12S, I15V, G16E, M36I, N37K, R41N, K45R, H69K, L89I, I93L  
BL_4003 BL_4003 None    I15V, L19I, E35D, M36I, R41K, L63A, H69K, I93L  
BL_4005 BL_4005 None    M36I, R41K, H69K, L89M, I93L  
BL_4006 BL_4006 None    I15V, L19X, K20R, M36I, R41K, Q61E, L63G, H69K, L89M, I93L  
BL_4007 BL_4007 None    I15V, G16E, M36I, R41K, L63Q, H69K, I93L  
BL_4009 BL_4009 None    L10V, I13V, K14KR, G16E, K20I, E35D, M36I, R57K, L63A, H69K, L89M T12G 
BL_4011 BL_4011 None    I13V, E35D, M36I, R41K, K45R, R57K, L63X, H69K, L89M  
BL_4012 BL_4012 None    I13V, E35D, M36I, K45R, R57K, L63T, H69K, L89M  
BL_4013 BL_4013 None    I15V, E35D, M36I, R41K, K45R, H69K, T74S, L89M, I93L  
BL_4014 BL_4014 None    T12S, L19I, M36I, R41K, L63X, H69K, T74S, L89M, I93L  
BL_4015 BL_4015 None    I13V, R41K, Q61H, H69K, A71T, I72E, V77I  
BL_4019 BL_4019 None    I13V, M36I, R41K, I62V, I64V, K70KR