Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Rhee (2017)
Title Mutational Correlates of Virological Failure in Individuals Receiving a WHO-Recommended Tenofovir-Containing First-Line Regimen: An International Collaboration.
Citation EBioMedicine
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 2873
NumPts 2873
Subtype C, B, CRF01_AE, A, G, CRF02_AG, D, CRF06_cpx, F, CRF45_cpx, CRF07_BC, CRF18_cpx, CRF10_CD, G + CRF02_AG, B + CRF01_AE, CRF11_cpx, CRF09_cpx, CRF12_BF, CRF49_cpx, A + G


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Page 1   listing Isolate 1 to Isolate 100 from Total 2873 Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
1w12 TDF, 3TC NVP K65R, M184MI, T215C K101E, Y181YC, G190A K49R, K82KR, K103R, I135K, I180V, Q197K, I202V, R211K, V245T  
2w4 TDF, 3TC NVP M184MIV V179VD, Y181YC, G190GA, F227FL R83K, T200A, R211K  
3w12 TDF, 3TC NVP K65R K103N, Y181C, G190GA T39TKN, K122E, S162SC, T200A, E204EA, Q207NT, R211RK  
4w12 TDF, 3TC NVP A62AV, K65KR Y181YC R83RK, D123E, K166R, D177E, R211K, V245E  
5w12 TDF, 3TC NVP M184I V108VI, Y181C V60I, K122E, D123DN, I135M, K173I, Q174K, D177E, T200A, Q207E, R211A, V245Q  
6w12 TDF, 3TC NVP K65R Y181YC, G190A K101Q, K122E, D123T, S162A  
8w12 TDF, 3TC NVP K65R V179D, G190A T39E, S48T, K122E, D123G, K173T, Q174K, T200A, Q207E, F214L, L228Q, K238R, V245Q  
CA14668 CA38169 TDF, 3TC EFV   K20KR, K32KN, V35M, T39TAIV, K122E, I132IV, I135IT, D177E, R211RK, A272P, T286A, E297R T58TA 
CA16210 CA38563 TDF, 3TC EFV K65R G190C K22R, K104R, K122E, D123N, I135L, T200A, E203K, L283I, T286A, A288G, I293V  
CA17616 CA41473 TDF, 3TC NVP K65KR, M184MV V108VI, Y181C, Y188YH K20R, V35L, K101R, K122E, I132IL, S162C, K166KR, E203EK, Q207E, R211K, V245E, A272P, E291D, V292I, I293V  
CA17699 CA41643 TDF, 3TC EFV M184I K101KE, K103N, Y188L K122E, D123N, D177EG, T200A, V245K, I293IV, P294T  
CA18329 CA42806 TDF, 3TC NVP M184V Y181C K82R, R83K, K102R, D123N, K173N, T200A, E203EK, R211K, E297K  
CA21049 CA134477 TDF, FTC NVP K65KR, K70KE, M184IV K103N, Y181C K122E, I135V, F214L, T286A  
CA22180 CA57902 TDF, 3TC EFV M184V E138K, G190E V35L, R83K, K101KQ, V179VG, G196EK, T200A, D250E, T286A, I293V, E297K  
CA22205 CA64076 TDF, FTC EFV   K122E, I142V, Q197K, R211K, A272G, T286A, V317A, S322T, D324S  
CA22222 CA170420 TDF, FTC EFV   V60I, R83K, A272T, V292I, I293V, E297A  
CA23786 CA55198 TDF, FTC EFV   V60I, R83K, K103R, I135V, I178M, T200A, A272P, E297A  
CA23836 CA68739 TDF, FTC EFV   R83K, K122E, E169D, T200I, Q207E, R211K, A272P, K277R, I293V  
CA23900 CA55428 TDF, 3TC EFV K65KR, M184V K103N, P225H K49R, I50V, A98S, K122E, D123DN, I135V, I142V, E169D, T200R, F214L, A272P, V276I, K277R, Q278N, L283I  
CA24999 CA59367 TDF, FTC EFV  G190GE V35I, K64KR, V118I, I135T, K173T, G196E, Q197K, I202V, F214L, A272P, I293V  
CA25004 CA59369 TDF, FTC EFV   V35T, V60I, I135T, I142V, R211K, V245T, D250E, A272P, K287R P52PS 
CA25077 CA58200 TDF, FTC NVP K65R, M184I Y181C E6K, I31L, K122E, R211K, A288S, P294Q  
CA25096 CA96551 TDF, FTC NVP A62V, K65R, M184V K103N, Y181C T27TS, V35VI, I142T, S162C, I178M, G196E, T200TA, R211K, A272P, K277R, T286A, V292VI, E297K  
CA26303 CA175474 TDF, FTC EFV   K102Q, K104T, K122E, V245K  
CA26397 CA64124 TDF, FTC EFV   E6D, K101Q, S105A, D121H, K122E, I135T, P170PS, V245M, A272P, K277R, I293V  
CA26406 CA64126 TDF, FTC EFV   K103R, K122E, I178M, T200A, Q207E, F214L, Q278S, T286A, I293V  
CA27746 CA79464 TDF, FTC EFV M184V K101E, Y181YC, G190S T69N, V90I, D121H, K122E, I135T, Q174E, D177E, I195L, V245M, A272P, T286P  
CA27849 CA68775 TDF, FTC EFV   K20R, V60I, K122E, I135V, R211K, F214L, K277R, E297A Q258QR 
CA27916 CA64496 TDF, FTC EFV   K122E, D123E, I135V, S162C, T200TA, R211RK, K277R, T286A, E297K  
CA27924 CA68785 TDF, FTC EFV   V35T, K102R, D177E, R211K, V245M, E248N, A272P, I293V  
CA30120 CA68917 TDF, FTC EFV   V35T, K49KR, V60VI, D121DY, K122KE, D123DEKN, S162CF, D177DE, I178IL, Q197L, Q207E, V245E I135IGRV 
CA30247 CA88322 TDF, FTC EFV   K11KN, K173KEQ, Q207H, R211K, S251I, K277KR, I293V, E297T  
CA35520 CA134517 TDF, FTC EFV   V35T, T39TA, D123N, T165TI, E169ED, D177E, Q207E, R211K, K277R, Q278QH, T286A, I293V, E297K  
CA35567 CA95289 TDF, FTC EFV T215TN K103N E6ED, T7TP, D121DY, K122E, I135T, S162C, K173E, T200A, A272P, K281R, I293V  
CA35596 CA134521 TDF, FTC EFV T69D K103N, Y181C, G190GA V35T, E40D, K49R, V60I, K122KE, D123DE, I135X, D177E, T200I, Q207E, R211K, V245K, D250E, A272P, L282C, L283I, V292VI, I293V  
CA35608 CA79754 TDF, FTC EFV   K64KR, R83RK, V90VI, K102KQ, K122P, T200TI, A272P, K277R, L283I, I293V  
CA35613 CA95299 TDF, FTC EFV   V35VI, I135K, G196GS, T200A, R211K, V276I, Q278H, T286A, P294S F160FV, M164MR, L168LV, N175NK 
CA37879 CA152374 TDF, FTC EFV  L100LI, K103N K11R, D123E, I135T, D177E, T200I, I202V, R211K, L228LR, A272P, L283I, I293V  
CA38006 CA123504 TDF, FTC EFV K65R L100I, K103N V35I, S48T, K104KR, K122E, D177E, I178M, R211K, D250E, A272P, K277R, Q278QH, E297Q  
CA38093 CA88350 TDF, FTC EFV   K20R, Q145V, T200I, Q207A, R211K, V245E, E248EK, D250E, K281KR, I293V  
CA38114 CA88352 TDF, FTC EFV M184V G190S K101KQ, Q197QR, V245E, E248D, I293V, T296S  
CA38127 CA84906 TDF, FTC EFV   R83K, K122E, I142IT, E169D, T200TI, I202V, R211K, A272P, K277R, E297K  
CA39127 CA88384 TDF, FTC EFV   K20R, V35T, T39L, R211K, V245E, E248ED, P294Q  
CA39196 CA134529 TDF, FTC EFV   K13R, V35I, R83K, I135T, E138A, G196E, I202V, R211K, F214L, E248D, K249R, A272P, I293V, T296S  
CA42004 CA95337 TDF, FTC EFV   V35IT, D123E, I195IV, K277R K259M 
CA42007 CA96587 TDF, FTC NVP L74LV, M184V K103N, Y181C K20R, K122E, D123N, Q145V, T200A, Q207A, R211K, I293V  
CA42036 CA123524 TDF, FTC EFV  K103KN E6D, K22R, V35T, T39K, V106I, V118I, K122E, D123S, I135T, K173I, Q174K, D177E, I180IV, T200A, Q207A, R211S, F214L, K238R, V245E, T286A, E291D, V292I, I293V, E297A  
CA42580 CA96599 TDF, FTC NVP A62V, K65R, M184V K103N, Y181C V35M, R83K, G196E, T200V, V245E, V276I, K277R, P294Q, E297K  
CA42619 CA96677 TDF, FTC EFV   V35T, T39K, S48T, V118I, K122E, T139A, K173T, T200A, Q207E, R211K, F214L, V245Q, K277R, T286A, E291D, V292I, I293V  
CA42699 CA96839 TDF, FTC NVP  V179VD S68G, K122E, K166R, D177DE, T200E, Q207RT, R211RK, V241I, A272T, K277R, T286A  
CA55968 CA123746 TDF, 3TC EFV  K103N T27S, V35M, S48E, V60I, R83K, D123E, E169D, D177E, I178M, G196E, T200A, R211Q, A272P, K277R, T286TA, E297K  
CA55999 CA123808 TDF, FTC NVP  Y181YC V35I, S68SG, R83K, D123E, I135T, T165I, I202IV, R211K, A272P, K277R, P294T, E297R  
CA56005 CA134551 TDF, FTC EFV  V179E V35L, R83K, K102Q, D123E, I135V, I195L, T286A, E291D, I293V  
CA56043 CA152404 TDF, FTC EFV   I50V, R83K, Q174E, I178V, V179I, G196E, T200A, E204K, Q207E, F214L, A272P, V292I, I293V, E297K G262GE 
CA57344 CA126363 TDF, FTC EFV   E6ED, I135T, T200TAIV, F214L, T286A, E291D  
CA57364 CA126403 TDF, FTC NVP A62AV, K65KR, K70KE, M184V K103N, Y181C V35I, R83RK, K122E, I135T, T200TA, R211K, L228LR, L283I, I293V I270IF 
CA57404 CA126483 TDF, FTC EFV M184V K103N, V179E, P225PH V35M, K122E, I135V, S162C, T200A, Q207K, R211A, K277R, T286A, A288S, I293V  
CA57448 CA134561 TDF, FTC NVP M184I Y181C E6EK, V90VI, V118I, K122E, D123E, Q174E, R211G, F214L, V241VM, I293V, P294T  
CA57449 CA152414 TDF, FTC EFV   E6D, V35T, D123E, K166R, D177E, Q197E, T200TA, Q207N, R211K, V245M, I293V I270IF, E291EV 
CA57477 CA134565 TDF, FTC EFV A62AV, K65KR, L74LV, M184IV L100I, K103N I142V, T165I, V179VI, G196E, Q207E, R211K, L228LR, A272P, K277R, Q278H, I293V  
CA61483 CA170485 TDF, FTC EFV  V179VDE E6EK, T27S, K32N, A98S, K122KE, D123DGNS, I135R, D177E, I178IM, F214L, V245E, K277R, R284K, T286A, I293V, E297A  
CA61504 CA152430 TDF, FTC EFV   V60I, R83K, I195L, R211RK, K238R, V245KQ, E248ED, A272P, K277R, T286A, I293V G93GE 
CA61521 CA152432 TDF, FTC EFV M184I K101E, G190A K122E, R211K, F214L, H221Y, E248D, T286A, E297A  
CA61612 CA152442 TDF, FTC EFV M184I, K219KN V179E, Y181C, Y188HL E6EK, T69N, K103R, V106I, K122E, D123DN, S162C, T165V, T200K, Q207E, R211K, A272P, T286A, I293V  
CA61631 CA152444 TDF, FTC NVP K65KR, M184MV K103KN, Y181C, G190GA V118I, K122E, I135T, T165X, I178IV, T200X, E204EK, R211G, F214L, H221HY, T286A  
CA61724 CA152448 TDF, FTC EFV   R83RK, D123E, I178L, V179I, Q207EK, I244V, V245E, A272P, K277KR, T286A, I293IV, E297R  
CA70472 CA152492 TDF, FTC EFV   V111I, K122E, I135V, T200A, E204K, Q207E, F214L, V245E E29D 
CA70500 CA152550 TDF, FTC EFV L74LI, M184MIV, K219KN L100LI, K103N, P225PH K32R, R83K, S162SY, R211RG, A272P  
CA70564 CA152677 TDF, 3TC EFV   V35T, E36A, T39E, E40D, S48T, D121H, K122E, D123S, K173A, Q174K, D177E, I178IL, T200A, Q207E, R211K, V245Q, A272P, T286A, E291D, I293V  
CA70689 CA170495 TDF, FTC EFV D67DG, V75VL, M184I K103N, Y188H V35I, V60I, A98S, K122E, I135T, Q197E, R211K, V245E, A272P, K281R, I293V, E297K, R356G, A360T, T377K, K390R, A400T, L452M, D460N, S468Q, H483Y, L491S, S519N, V531I, A554NS, K558R, V559VI I270IF 
CA75701 CA162455 RTI, TDF, FTC RTI, EFV K65R, M184I L100I, V108VI, Y181C K49KR, D123E, I132L, I135T, T165I, I178L, T200A, F214L, H221Y, P243T, A272P, K277R, E297K, V317A  
CA79959 CA170481 TDF, FTC EFV  K103N V35VI, V60I, R83K, K122R, D123E, K166KR, K173KE, Q174QR, D177E, G196GE, T200AE, R211K, A272P, V276VI  
CA80122 CA170828 TDF, FTC EFV   V35T, K122P, P176S, I178M, T200E, V245E, D250E, T286A  
PL43225 98185 TDF, 3TC EFV  K103KN V35KR, T39D, S48T, K122E, D123NS, S162C, K166KR, K173A, Q174K, D177E, I178IL, T200A, Q207E, R211K, V245Q, A272P, L283I, T286V, E291D, V292I, I293V, I326V  
PL49450 91563 TDF, 3TC EFV M184V V106M, V179E, F227FL E28K, V35T, T39A, E40D, K43R, V60I, A98S, K122E, D123S, I135T, K173I, Q174K, D177E, T200A, Q207K, R211S, V245Q, E248D, D250E, A272P, T286A, A288G, V292T, I293V, E297A, K311R, D320E, D324E, I329V, Q334P  
PL49802 101502 TDF, 3TC EFV M184MIV  V35T, E36D, T39L, V60I, K122KE, D123DN, I135V, S162A, K173T, Q174K, D177E, I195L, T200A, Q207E, R211RK, V245Q, D250DE, A272P, T286TA, E291D, V292I, I293V, P294T, S322T, I326V  
PL50649 94673 TDF, 3TC EFV L74V, M184V L100I, K103N V35I, A98S, K122E, D123S, I135T, K173I, Q174K, D177E, T200A, R211S, V245Q, D250E, A272P, K275Q, T286A, E291D, V292T, I293V, E297A, L301M, D320E, D324E, I329V  
PL53431 101839 TDF, 3TC EFV A62AV, M184V V106M, Y188C V35T, K122E, K173A, D177E, I178L, E194EK, G196E, T200A, E204EG, Q207E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, K311R, D324E  
PL54779 105582 TDF, 3TC NVP K65R, M184I Y181C, M230L V35T, A98S, K173I, Q174E, D177E, T200A, Q207K, R211S, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, E297A, D320E, D324E, I329V  
R107 ZZR107 TDF, 3TC NVP A62AV, K65R, M184V K101E, Y181C, G190S V35T, S68SG, D123E, S162A, K173A, Q174K, D177E, T200A, Q207E, R211RK, V245Q, D250E, A272AP, E291D, V292I, I293V, E297K, I329V  
R109 ZZR109 TDF, 3TC NVP A62V, K65R, Y115F, M184V V106A, F227L T27S, K32R, V35T, T39S, K49R, W88C, I135V, S162A, K173A, Q174K, D177E, T200A, Q207E, V245K, D250E, K277R, K281R, L283I, V292I, I293V, S322A, I326V  
R111 ZZR111 TDF, 3TC NVP  V179VE, Y181C V35T, E36D, V60I, D123E, I135L, S162A, K173T, Q174K, D177E, I178L, T200A, Q207E, K223KT, V245E, D250E, K281R, R284K, T286A, K287R, E291D, V292I, I293V, P294T, E312A, S322T  
R132 ZZR132 TDF, 3TC EFV L74I, M184V K103N, V179E, P225H K20R, V35T, E36D, V60I, D123E, I135V, E138G, S162A, K173I, Q174K, D177E, I178L, T200A, R211K, P243T, V245Q, E248D, K277R, T286A, E291D, V292I, I293V, P294T, L295M, S322T  
R14 ZZR14 TDF, 3TC NVP A62AV, K65N, Y115F, M184V Y181C, Y188YH, G190GA P4S, I5IV, K20R, V35T, E36D, V60I, I135V, K173T, Q174K, D177E, I178V, T200A, E203EK, Q207E, F214L, V245E, T286A, E291D, I293V, P294T, S322T, I326V  
R197 ZZR197 TDF, 3TC NVP A62AV, K65R, Y115YF, M184V Y181C, G190A K20KR, V21I, V60I, S68SN, K101R, K102KM, K122E, D123GS, I135T, S163T, T165TI, E169ED, F171FY, K173T, Q174KR, I178M, T200A, Q207E, R211K, H221HY, V245Q, E248D, D250E, A272P, K277R, E291D, V292I, I293V, P294Q, D324E, I329V  
R254 ZZR254 TDF, 3TC NVP K65R, Y115F, M184V K103N, Y181C V35T, K122E, D123E, S162A, Q174E, D177E, T200A, Q207E, R211K, F214L, L228I, V245Q, S251R, V276I, T286A, E291D, V292I, I293A, P294T, I326V  
R266 ZZR266 TDF, 3TC NVP K65R, Y115F, M184V V106A, Y181C P4T, E6EK, V35T, E36D, T39I, K49R, S68SG, K122E, D123E, I135V, S162A, K173T, Q174QKR, D177E, T200A, Q207E, R211K, V245Q, D250E, S251H, L283I, E291D, V292I, I293V, P294T, L295M, S322T  
R272 ZZR272 TDF, 3TC NVP M184I Y181C V35T, T39N, V60I, V90I, K101KR, T165L, E169D, K173A, Q174R, D177E, T200E, Q207A, V245Q, E248N, A272P, K277R, T286A, I293V, P294T, E297Q, I329V  
R28 ZZR28 TDF, 3TC NVP K65R, M184V K103N, Y181C K20KR, T27S, V35T, E36D, T39K, K43KE, K49KR, V60I, S68G, V90VI, K122E, D123G, I135T, E138A, S162A, K173T, Q174K, D177E, I178M, T200A, Q207D, R211K, V245E, D250E, S251H, K281KR, T286A, E291D, I293V, P294T, L295M, K311KR, S322T  
R353 ZZR353 TDF, 3TC NVP  G190A V35T, V60I, K122P, I135V, S162A, F171Y, K173A, Q174K, D177E, I178V, T200A, Q207E, R211K, F214L, V245Q, E248D, K275Q, V276I, T286A, E291D, V292I, I293V, P294T, S322A, I326V  
R361 ZZR361 TDF, 3TC NVP K65R, Y115F, M184V K101E, Y181C, G190A P4L, V35T, V60I, K104KR, V106I, D123S, K173V, Q174K, D177E, T200A, I202V, R211K, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, I293V, P294T, I326V  
R437 ZZR437 TDF, 3TC NVP A62AV, K65R, M184V K103KN, Y181GV K20KR, S68G, D123DEKN, I135T, S162A, K173A, Q174K, P176PS, D177EG, V179IT, G196E, T200A, I202IV, Q207E, R211K, F214FL, E248ED, T286A, E291D, V292I, I293V, P294T, S322A  
R51 ZZR51 TDF, 3TC NVP K65R, M184V Y181C, G190GA I31IL, V35T, T39M, K122P, I135V, S162A, K173T, Q174EK, D177E, V179IM, T200A, R211K, V245Q, E248D, A272P, K275KR, E291D, V292I, I293V, S322A, A327G  
R52 ZZR52 TDF, 3TC NVP K65R, M184I K101E, Y181C, M230ML E28K, K32E, V35T, E40D, K49R, I50V, V60I, W88WC, A98S, K122E, I135V, S162C, K166KR, E169D, K173R, Q174N, D177E, I178L, T200A, Q207E, V245Q, D250E, S251H, T286A, E291D, V292I, I293V, E297A, P321S, D324E, I329V  
R57 ZZR57 TDF, 3TC NVP K70E, M184V A98G, Y181C V35T, K122E, D123S, I135M, K173T, Q174K, D177E, I178L, T200A, Q207E, R211K, L228R, V245Q, E248D, D250E, A272P, Q278H, E291D, V292I, I293V, D324E, I329V  
R61 ZZR61 TDF, 3TC NVP K65R, M184I K103N, Y181C V35T, T39M, K49R, V90I, K102R, K122E, T165I, D177E, I178M, Q207E, R211K, F214L, V245T, D250E, A272P, K277R, T286A, E297K, K311R, I329V S68SDGN 
R65 ZZR65 TDF, 3TC NVP K65R, M184V K101E, Y181C, G190A V35T, S68N, V90VI, D123E, I135T, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, K281R, T286A, E291D, V292I, I293V, L295M, S322AT  
R67 ZZR67 TDF, 3TC NVP K65R, M184V V179E, Y181C K20R, V35T, T39K, K43E, K49R, V60I, K102KQ, D123E, F171Y, K173T, Q174K, D177E, T200A, I202IV, Q207E, V245K, E248D, D250E, S251N, A272P, T286A, E291D, V292I, I293V, P294T, S322T  
R69 ZZR69 TDF, 3TC NVP K65R K103N, Y181C V35T, E36D, V60VI, V90I, D123E, I135V, S162A, K173I, Q174E, D177E, I178IMV, T200A, E204K, Q207E, R211RK, V245Q, A272P, K281R, T286A, E291D, V292I, I293V, S322T, I326V  
UK4985 UK4985 TDF, 3TC NVP K65KR V106VA, Y181YC, G190GA, F227FL V35I, K122Q, S162A, K173AT, Q174EK, D177E, T200A, Q207E, R211RK