<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Gafarova (2010)
Title Investigation of genetic polymorphism of the integrase gene in the HIV-1 subtype A populations circulating in the Russian Federation.
Citation Vopr Virusol
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 43
NumPts 43
Subtype G, A, CRF63_02A1, B, CRF02_AG


Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
2971 2971 None    E11D, R20K, S24N, V31I, L101I, T112V, T124A, T125A, G134N, K136T, V201I, I203V, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
2973 2973 None    E11D, K14R, S24H, V32I, L74I, Y99F, L101V, T112V, T124A, T125A, G134N, K136T, V165I, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
2974 2974 None    E11D, K14R, S24N, V32I, K42R, M50I, L101I, T112I, T124Q, T125A, G134N, I135V, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
2976 2976 None    E11D, K14R, S24N, L101I, T112V, T124A, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
2977 2977 None    K14R, S24N, V31I, M50I, L101I, K111T, T112I, T124Q, T125V, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
2978 2978 None    K14R, S17N, V31I, M50I, L101M, T112V, I113V, T124N, T125A, G134D, A196P, V201I, T206S, T218S, L234I, S255N, D256E S283G 
2979 2979 None    I5L, K7T, E11D, K14R, S24N, V31I, V32I, K42R, M50L, L101I, T112I, T124Q, T125V, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
2981 2981 None    K14R, S24N, M50L, L101I, T112I, T124Q, T125V, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
2983 2983 None    E11D, E13D, S24N, P30S, M50I, I60M, L101I, T112V, T124A, T125A, G134D, I135V, K136T, V201I, T206S, T218S, Y227F, L234I, D253H, S255N, D256E, M275V S283G 
2984 2984 None    K14R, S24N, V31I, L101I, K103R, T112V, T122I, T124A, T125A, G134N, K136T, V201I, T206S, T218S, L234I, S255N, D256E S283G 
2985 2985 None    E11D, V31I, K111T, V201I, S230N, L234I, A265V  
3017 3017 None    E11D, K14R, S24N, V31I, M50I, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, Y227F, L234I, S255N, D256E S283G 
3018 3018 None    E11D, K14R, S24N, V31I, M50I, L101I, T112V, T124A, T125A, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
3019 3019 None  E138K E92K, G163R D6N, E11D, E13D, S17N, R20K, L28I, P30A, M50I, D55N, S81G, L101I, T112V, T124A, T125A, G134N, K136T, M154I, E157K, R166K, V201I, T206S, T218S, D232N, L234I, S255N, R262K D25N, E35K, E48K, G59K, D64N, E69K, G70K, E85K, E87K, G94E, E96K, G106E, R107K, D167N, D253N, D256K, S283G, D286N 
3020 3020 None    K14R, S24H, V31I, M50I, L101I, T112V, T125V, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
3021 3021 None    E11D, K14R, V31I, M50I, L101I, T112I, T124A, T125A, G134N, K136T, G163A, V201I, T206S, T218S, Y227F, L234I, S255N, D256E A276G, S283G 
3022 3022 None    E11D, K14R, S24N, V31I, M50I, L101I, T112V, S119G, T122I, T124A, T125A, G134N, G163A, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
3023 3023 None   G140K E11D, R20K, M22I, S24N, V31I, M50I, D55N, L101I, T112V, S119G, T122I, T125A, G134N, M154I, E157K, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, D279N D64N, E69K, G70R, E85K, G106E, R107K, E152K, D167N, E170K, V281M, S283G, E287K 
3024 3024 None    E11D, K14R, S24H, V31I, V32I, S39C, L45V, M50I, L101I, T112V, S119G, T124N, T125A, G134D, V201I, T206S, T218S, Y227F, L234I, S255N S283G 
3025 3025 None    E11D, S24N, V31I, M50I, L101I, T112V, T124N, T125A, G134N, I135V, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
3027 3027 None    E11D, S24N, V31I, M50I, L101I, T112V, T122I, T124A, T125A, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
3028 3028 None    E11D, K14R, S24N, V31I, M50I, L101I, T112V, S119G, T122I, T124N, T125A, G134N, S153A, G163E, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
3029 3029 None    E11D, S24N, V31I, M50I, L101I, T112V, T122I, T124A, T125A, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
3030 3030 None    E11D, R20K, S24H, V31I, Y99F, L101V, T112V, T124A, T125A, G134N, K136T, T206S, K215R, Y227F, L234I, S255N, D256E S283G 
3031 3031 None    E11D, V31I, M50I, L101I, T112I, T124A, T125A, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
3033 3033 None    K14R, S24N, V31I, K42R, L101I, K103R, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
3034 3034 None    K14R, S24N, V31I, K42R, M50I, L101I, T112V, T124A, T125A, G134N, K136T, V165I, T206S, T218S, Y227F, L234I, S255N, D256E H12P, S283G 
3080 3080 None    E11D, K14R, V31I, K111T, V201I, S230N, L234I, A265V  
3188 3188 None   G140R E11D, K14R, S24N, V31I, M50I, L101I, T112V, T124A, T125A, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, R269K G47E, S283G 
3190 3190 None   L74M E11D, S24H, V31I, Y99F, L101V, T112V, T124A, T125A, G134N, K136T, T206S, K215R, T218S, Y227F, L234I, S255N, D256E S283G 
3191 3191 None    K14R, V31I, I72V, L74I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, H171Y, V201I, T218I, L234I, S255N  
3192 3192 None  E138K G140K, G163R R20K, I72V, L74I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, M154I, R166K, D167E, V201I, I208L, R228G, L234V, S255N, R269K G47E, G52R, G59K, C65Y, G70R, E96K, G118S, G149R, G277S 
3195 3195 None    K14R, S24N, V31I, M50I, L74I, L101I, T112V, T124N, T125A, G134N, G163E, H171Q, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
3196 3196 None    E11D, V31I, V32I, Q44K, M50T, I72V, L101I, T112V, T125A, G134N, I135V, K136T, E157K, V201I, T206S, L234I, V259I, R269K S283G, D288N 
3197 3197 None    E11D, V31I, V32I, M50T, I72V, L101I, T112V, T125A, G134N, I135V, K136T, V201I, T206S, L234I, R269K S283G, D288N 
3271 3271 None    E11D, K14R, S24N, V31I, V32I, S39C, L45V, M50I, K71R, L101I, T112V, S119G, T124N, T125A, G134D, V201I, T206S, T218S, Y227F, L234I, S255N  
3272 3272 None    E11D, K14R, S24N, V31I, M50I, L101I, T112V, S119G, T122I, T124N, T125A, G134N, S153A, G163E, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
3274 3274 None    E11D, K14R, S24N, V31I, L101I, T112V, T124A, T125A, G134N, K136T, V201I, T206S, T218S, N222K, L234I, S255N, D256E, M275V S283G 
3280 3280 None    E11D, K14R, S24H, V31I, K42R, M50I, L101I, T112V, T124A, T125A, G134D, I135V, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
3289 3289 None    E11D, K14R, S24N, V31I, A49T, M50I, L101I, K111R, T112V, G134N, V165I, G193E, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G, D288N 
3294 3294 None    E11D, S24N, D25E, V31I, M50I, L101I, T112V, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, D270E S283G 
3300 3300 None   G140R, G163R K14R, S24N, V31I, K42R, M50I, L101I, T112V, T124A, T125A, G134N, K136T, R166K, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, R269K G47E, S283G 
3302 3302 None    E11D, K14R, S17N, S24N, L28I, P30A, L101I, T112I, T122I, T124A, T125A, K127R, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E P238L, S283G