<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Gafarova (2010)
Title Investigation of genetic polymorphism of the integrase gene in the HIV-1 subtype A populations circulating in the Russian Federation.
Citation Vopr Virusol
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 43
NumPts 43
Subtype G, A, CRF63_02A1, B, CRF02_AG

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
2971 2971 None    E11D, R20K, S24N, V31I, L101I, T112V, T124A, T125A, G134N, K136T, V201I, I203V, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
2973 2973 None    E11D, K14R, S24H, V32I, L74I, Y99F, L101V, T112V, T124A, T125A, G134N, K136T, V165I, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
2974 2974 None    E11D, K14R, S24N, V32I, K42R, M50I, L101I, T112I, T124Q, T125A, G134N, I135V, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
2976 2976 None    E11D, K14R, S24N, L101I, T112V, T124A, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
2977 2977 None    K14R, S24N, V31I, M50I, L101I, K111T, T112I, T124Q, T125V, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
2978 2978 None    K14R, S17N, V31I, M50I, L101M, T112V, I113V, T124N, T125A, G134D, A196P, V201I, T206S, T218S, L234I, S255N, D256E, S283G  
2979 2979 None    I5L, K7T, E11D, K14R, S24N, V31I, V32I, K42R, M50L, L101I, T112I, T124Q, T125V, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
2981 2981 None    K14R, S24N, M50L, L101I, T112I, T124Q, T125V, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
2983 2983 None    E11D, E13D, S24N, P30S, M50I, I60M, L101I, T112V, T124A, T125A, G134D, I135V, K136T, V201I, T206S, T218S, Y227F, L234I, D253H, S255N, D256E, M275V, S283G  
2984 2984 None    K14R, S24N, V31I, L101I, K103R, T112V, T122I, T124A, T125A, G134N, K136T, V201I, T206S, T218S, L234I, S255N, D256E, S283G  
2985 2985 None    E11D, V31I, K111T, V201I, S230N, L234I, A265V  
3017 3017 None    E11D, K14R, S24N, V31I, M50I, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, Y227F, L234I, S255N, D256E, S283G  
3018 3018 None    E11D, K14R, S24N, V31I, M50I, L101I, T112V, T124A, T125A, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
3019 3019 None  E138K E92K, G163R D6N, E11D, E13D, S17N, R20K, L28I, P30A, M50I, D55N, S81G, L101I, T112V, T124A, T125A, G134N, K136T, M154I, E157K, R166K, V201I, T206S, T218S, D232N, L234I, S255N, R262K, S283G, D286N D25N, E35K, E48K, G59K, D64N, E69K, G70K, E85K, E87K, G94E, E96K, G106E, R107K, D167N, D253N, D256K 
3020 3020 None    K14R, S24H, V31I, M50I, L101I, T112V, T125V, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
3021 3021 None    E11D, K14R, V31I, M50I, L101I, T112I, T124A, T125A, G134N, K136T, G163A, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G A276G 
3022 3022 None    E11D, K14R, S24N, V31I, M50I, L101I, T112V, S119G, T122I, T124A, T125A, G134N, G163A, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
3023 3023 None   G140K E11D, R20K, M22I, S24N, V31I, M50I, D55N, L101I, T112V, S119G, T122I, T125A, G134N, M154I, E157K, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, D279N, V281M, S283G D64N, E69K, G70R, E85K, G106E, R107K, E152K, D167N, E170K, E287K 
3024 3024 None    E11D, K14R, S24H, V31I, V32I, S39C, L45V, M50I, L101I, T112V, S119G, T124N, T125A, G134D, V201I, T206S, T218S, Y227F, L234I, S255N, S283G  
3025 3025 None    E11D, S24N, V31I, M50I, L101I, T112V, T124N, T125A, G134N, I135V, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
3027 3027 None    E11D, S24N, V31I, M50I, L101I, T112V, T122I, T124A, T125A, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
3028 3028 None    E11D, K14R, S24N, V31I, M50I, L101I, T112V, S119G, T122I, T124N, T125A, G134N, S153A, G163E, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
3029 3029 None    E11D, S24N, V31I, M50I, L101I, T112V, T122I, T124A, T125A, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
3030 3030 None    E11D, R20K, S24H, V31I, Y99F, L101V, T112V, T124A, T125A, G134N, K136T, T206S, K215R, Y227F, L234I, S255N, D256E, S283G  
3031 3031 None    E11D, V31I, M50I, L101I, T112I, T124A, T125A, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
3033 3033 None    K14R, S24N, V31I, K42R, L101I, K103R, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
3034 3034 None    K14R, S24N, V31I, K42R, M50I, L101I, T112V, T124A, T125A, G134N, K136T, V165I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G H12P 
3080 3080 None    E11D, K14R, V31I, K111T, V201I, S230N, L234I, A265V  
3188 3188 None   G140R E11D, K14R, S24N, V31I, M50I, L101I, T112V, T124A, T125A, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, R269K, S283G G47E 
3190 3190 None   L74M E11D, S24H, V31I, Y99F, L101V, T112V, T124A, T125A, G134N, K136T, T206S, K215R, T218S, Y227F, L234I, S255N, D256E, S283G  
3191 3191 None    K14R, V31I, I72V, L74I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, H171Y, V201I, T218I, L234I, S255N  
3192 3192 None  E138K G140K, G163R R20K, I72V, L74I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, M154I, R166K, D167E, V201I, I208L, R228G, L234V, S255N, R269K G47E, G52R, G59K, C65Y, G70R, E96K, G118S, G149R, G277S 
3195 3195 None    K14R, S24N, V31I, M50I, L74I, L101I, T112V, T124N, T125A, G134N, G163E, H171Q, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
3196 3196 None    E11D, V31I, V32I, Q44K, M50T, I72V, L101I, T112V, T125A, G134N, I135V, K136T, E157K, V201I, T206S, L234I, V259I, R269K, S283G, D288N  
3197 3197 None    E11D, V31I, V32I, M50T, I72V, L101I, T112V, T125A, G134N, I135V, K136T, V201I, T206S, L234I, R269K, S283G, D288N  
3271 3271 None    E11D, K14R, S24N, V31I, V32I, S39C, L45V, M50I, K71R, L101I, T112V, S119G, T124N, T125A, G134D, V201I, T206S, T218S, Y227F, L234I, S255N  
3272 3272 None    E11D, K14R, S24N, V31I, M50I, L101I, T112V, S119G, T122I, T124N, T125A, G134N, S153A, G163E, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
3274 3274 None    E11D, K14R, S24N, V31I, L101I, T112V, T124A, T125A, G134N, K136T, V201I, T206S, T218S, N222K, L234I, S255N, D256E, M275V, S283G  
3280 3280 None    E11D, K14R, S24H, V31I, K42R, M50I, L101I, T112V, T124A, T125A, G134D, I135V, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G  
3289 3289 None    E11D, K14R, S24N, V31I, A49T, M50I, L101I, K111R, T112V, G134N, V165I, G193E, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G, D288N  
3294 3294 None    E11D, S24N, D25E, V31I, M50I, L101I, T112V, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, D270E, S283G  
3300 3300 None   G140R, G163R K14R, S24N, V31I, K42R, M50I, L101I, T112V, T124A, T125A, G134N, K136T, R166K, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, R269K, S283G G47E 
3302 3302 None    E11D, K14R, S17N, S24N, L28I, P30A, L101I, T112I, T122I, T124A, T125A, K127R, G134N, K136T, V201I, T206S, T218S, Y227F, L234I, S255N, D256E, S283G P238L