Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Gottlieb (2011)
Title HIV-2 integrase variation in integrase inhibitor-naïve adults in Senegal, West Africa.
Citation PLoS ONE
SelectedGene IN
SelectedSpecies HIV2
SelectedType Clinical
NumIsolates 77
NumPts 39
Host Human

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
H2A001 11INT002 None    N30Q, S39T, I172M, N217S, L220F, D222K, E246D, L250I, G278S K4R, S23I, I28IL, R34K, A41T, N55D, S93T, I133V, I180V, S197A, F227Y, I259V, M275L, S279P, H280N 
  11INT001 None    N30Q, S39T, I172M, N217S, L220F, D222K, E246D, L250I, G278S K4R, S23I, I28L, R34K, A41T, N55D, S93T, I133V, I180V, S197A, F227Y, I259V, M275L, S279P, H280N 
H2A003 11INT003 None    S39T, I172M, L220F, D256E I28L, N30K, I133A, I180V, S197A, I201V, D222N, H280N 
  11INT004
Consensus 		Unknown    S39T, A41X, R164K, I172M, L220F, D256E, G278X I28L, N30K, I133A, I180V, S197A, I201V, D222N, H280N 
  clone: 15 Unknown    S39T, R164RK, I172M, L220F, D256E, G278GS I28L, N30K, A41AT, I133A, I180V, S197A, I201V, D222N, H280N 
  clone: 16 Unknown    S39T, R164RK, I172M, L220F, D256DE I28L, N30K, I133A, I180V, S197A, I201V, D222N, H280N 
  11INT005 Unknown    S39T, R164K, I172M, L220F, D256E I28L, N30K, I133A, I180V, S197A, I201V, D222N, H280N 
H2A006 11INT006 Unknown    S39T, S163D, I172V, L213F, S218L, L220F, L250I, R269K I28L, N30K, A41AT, Q96H, I133V, E167D, I180V, S197A, D222N, I259V, M275L, H280N 
  11INT007 Unknown    S39T, S163D, I172V, L213F, S218L, L220F, L250I, R269K I28L, N30K, Q96H, I133V, E167D, I180V, S197A, D222N, I259V, M275L, H280N 
H2A007 11INT008 None    S23T, N30Q, S39T, T60V, S163N, I172V, A215R, K219N, L220F, E246D, L250I, G278S V19I, L58V, I133V, I180V, S197A, D222N, R224Q, F227Y, I259V, I260V, D270S, M275L, S279SP 
  11INT009
Consensus 		Unknown    S23T, N30Q, S39T, T60V, I133X, S163N, I172V, A215R, K219N, L220F, E246D, L250I, G278S V19I, L58V, I180V, S197A, D222N, R224Q, F227Y, I259V, I260V, D270S, M275L, S279P 
  clone: 11 Unknown    S23T, N30Q, S39T, T60V, I133X, S163N, I172V, A215R, K219N, L220F, E246D, L250I, G278S V19I, L58V, I180V, S197A, D222N, R224Q, F227Y, I259V, I260V, D270S, M275L, S279SP 
  clone: 12 Unknown    S23T, N30Q, S39T, T60V, I133X, S163N, I172V, A215R, K219N, L220F, E246D, L250I, G278S V19I, L58V, I180V, S197A, D222N, R224Q, F227Y, I259V, I260V, D270S, M275L, S279SP 
  11INT010
Consensus 		Unknown    S23T, N30Q, S39T, T60V, I133X, S163N, I172V, A215R, K219N, L220F, E246D, L250I, G278S, S279X V19I, L58V, I180V, S197A, D222N, R224Q, F227Y, I259V, I260V, D270S, M275L 
  clone: 13 Unknown    S23T, N30Q, S39T, T60V, I133X, S163N, I172V, A215R, K219N, L220F, E246D, L250I, G278S V19I, L58V, I180V, S197A, D222N, R224Q, F227Y, I259V, I260V, D270S, M275L, S279SP 
  clone: 14 Unknown    S23T, N30Q, S39T, T60V, S163N, I172V, A215R, K219N, L220F, E246D, L250I, G278S V19I, L58V, I133V, I180V, S197A, D222N, R224Q, F227Y, I259V, I260V, D270S, M275L 
  11INT011 Unknown    S23T, N30Q, S39T, T60V, I133X, S163N, I172V, A215R, K219N, L220F, E246D, L250I, G278S V19I, L58V, Q96QH, I180V, S197A, D222N, R224Q, F227Y, I259V, I260V, D270S, M275L, S279SP 
H2A009 11INT012 None   G140R V32I, S39T, T60V, M63I, W132*, G134S, S163D, I172V, T206A, W243*, E246D, L250I, D270E, M275V, R284K V19I, G27R, N30K, A41V, G47E, G52R, G82K, G118S, M128I, I133V, E167D, I180V, S197A, K221Q, D222N, R224Q, G239E, E240D, T255A, I260V, G272R, G287R 
  11INT013 None    V32VI, S39T, T60V, S163D, I172V, T206A, E246D, L250I, D270E V19I, N30K, I133V, E167D, I180V, S197A, K221Q, D222N, E240D, T255A, I260V, E274D 
H2A010 11INT014
Consensus 		Unknown    S39T, I172M, I210V, Q214H, A215S, L250I, M275V V19I, N30K, N55D, S93T, I133V, I180V, S197A, D222N, I259V, S279P 
  clone: 3 Unknown    S39T, I172M, I210V, Q214H, A215S, L250I, M275V V19I, N30K, N55D, S93T, I133V, I180V, S197A, D222N, I259V, S279P 
  clone: 4 Unknown    S39T, I172M, I210V, Q214H, A215S, L250I, M275V V19I, N30K, N55D, S93T, I133V, I180V, S197A, D222N, I259V, S279P 
  11INT015
Consensus 		Unknown    S39T, I172M, I210V, Q214H, A215S, L250I, M275V V19I, N30K, R34RK, N55D, S93T, I133V, I180V, S197A, D222N, I259V, S279P 
  clone: 5 Unknown    S39T, I172M, I210V, Q214H, A215S, L250I, M275V V19I, N30K, R34RK, N55D, S93T, I133V, I180V, S197A, D222N, I259V, S279P 
  clone: 6 Unknown    S39T, I172M, I210V, Q214H, A215S, L250I, M275V V19I, N30K, N55D, S93T, I133V, I180V, S197A, D222N, I259V, S279P 
  11INT016 Unknown    S39T, I172M, I210V, Q214H, A215S, L250I, M275V, R284K V19I, N30K, R34K, N55D, S93T, I133V, I180V, S197A, D222N, I259V, S279P 
H2A014 11INT017 Unknown    V32I, S39T, A41N, S163N, I172X, T206A, E246D, L250I K4R, I28L, N30T, T60I, I133V, E167D, I180V, S197A, D222N, I259V, I260V, M275L, H280N 
  11INT018
Consensus 		Unknown    V32I, S39T, A41N, S163N, I172V, T206A, E246D, L250I K4R, I28L, N30T, T60I, I133V, E167D, I180V, S197A, D222N, I259V, I260V, M275L, H280N 
  clone: 19 Unknown    V32I, S39T, A41N, S163N, I172V, T206A, E246D, L250I K4R, I28L, N30T, T60I, I133V, E167D, I180V, S197A, D222N, I259V, I260V, M275L, H280N 
  clone: 20 Unknown    V32I, S39T, A41N, S163N, I172V, T206A, E246D, L250I K4R, I28L, N30T, T60I, I133V, E167D, I180V, S197A, D222N, I259V, I260V, M275L, H280N 
  11INT019
Consensus 		Unknown    V32I, S39T, A41N, S163N, I172V, T206A, E246D, L250I K4R, I28L, N30T, T60I, G70GR, W132W*, I133V, E167D, I180V, S197A, D222N, I259V, I260V, M275L, H280N 
  clone: 11 Unknown    V32I, S39T, A41N, S163N, I172V, T206A, E246D, L250I K4R, I28L, N30T, T60I, G70GR, W132W*, I133V, E167D, I180V, S197A, D222N, I259V, I260V, M275L, H280N 
  clone: 12 Unknown    V32I, S39T, A41N, S163N, I172V, T206A, E246D, L250I K4R, I28L, N30T, T60I, I133V, E167D, I180V, S197A, D222N, I259V, I260V, M275L, H280N 
H2A020 11INT020 Unknown    L2I, S39T, I133T, R164K, T206A, Q214H, S218L, E246D, L250I V19I, N30K, I180V, S197A, I201V, D222N, I259V, I260V, M275L 
  11INT021 Unknown    L2I, S39T, R164K, T206A, Q214H, S218L, E246D, L250I I28L, N30K, G82R, I133A, I180V, S197A, I201V, D222N, I259V, I260V, M275L 
  11INT022 Unknown    L2I, S39T, R164K, T206A, Q214H, S218L, E246D, L250I I28L, N30K, I133A, A153S, I180V, S197A, I201V, D222N, I259V, I260V, M275L 
  11INT023
Consensus 		Unknown    L2I, S39T, I133X, R164K, T206A, Q214H, S218L, E246D, L250I V19I, I28IL, N30K, A153S, I180V, S197A, I201V, D222N, I259V, I260V, M275L 
  clone: 13 Unknown    L2I, S39T, I133X, R164K, T206A, Q214H, S218L, E246D, L250I V19VI, N30K, A153AS, I180V, S197A, I201V, D222N, I259V, I260V, M275L 
  clone: 14 Unknown    L2I, S39T, R164K, T206A, Q214H, S218L, E246D, L250I V19I, I28L, N30K, I133A, A153S, I180V, S197A, I201V, D222N, I259V, I260V, M275L 
H2A021 11INT024 None    N30Q, S163N, I172V, L220F, L250I, G278S K4R, V19M, I28L, R34K, A41T, A119S, I180V, S197A, D222N, F227Y, I259V, M275L, S279P, H280N 
  11INT025 None    N30Q, S163N, I172V, L220F, L250I, G278S K4R, V19M, I28L, R34RK, A41T, A119S, I180V, S197A, D222N, F227Y, I259V, M275L, S279P, H280N 
  11INT026 None    N30Q, S39ST, S163N, I172V, L220F, L250I, G278S K4R, V19M, I28L, R34RK, A41T, A119S, I180V, S197A, D222N, F227Y, I259V, M275L, S279P, H280N 
H2A022 11INT027
Consensus 		None    S39T, V88VI, I172M, I175X, I180A, A215T, L220F, E246D, L250I, G278X, S279X K20T, I28L, N30K, A41T, L58V, W131W*, W132W*, I133V, S197A, D222N, F227Y, I259V, I260V, P261PS, M275L, H280N 
  clone: 87 None    S39T, W131*, W132*, I172M, I175V, I180A, A215T, L220F, E246D, L250I, G278S K20T, I28L, N30K, A41T, L58V, I133V, S197A, D222N, F227Y, I259V, I260V, M275L, H280N 
  clone: 88 None    S39T, V88I, I172M, I180A, A215T, L220F, E246D, L250I, G278S K20T, I28L, N30K, A41T, L58V, I133V, S197A, D222N, F227Y, I259V, I260V, M275L, S279P, H280N 
  clone: 90 None    S39T, I172IM, I175V, I180A, A215T, L220F, E246D, L250I K20T, I28L, N30K, A41T, L58V, I133V, S197A, D222N, F227Y, I259V, I260V, P261S, M275L, H280N 
H2A024 11INT028 None   S138T Y15F, S39T, I72V, S163SN, I172V, T206A, E246D, L250I, R269K, M275MV I28L, N30K, S93T, I133V, I180V, S197A, D222N, I260V, S279P 
  11INT029
Consensus 		None   S138T Y15F, S39T, I72V, S163X, I172V, T206A, E246D, L250I, R269K I28L, N30K, S93T, I133V, I180V, S197A, D222N, I260V, S279P 
  clone: 21 None   S138T Y15F, S39T, I72V, S163X, I172V, T206A, E246D, L250I, R269K I28L, N30K, S93T, I133V, I180V, S197A, D222N, I260V, S279P 
  clone: 22 None   S138T Y15F, S39T, I72V, S163D, I172V, T206A, E246D, L250I, R269K I28L, N30K, S93T, I133V, I180V, S197A, D222N, I260V, S279P 
  11INT030 Unknown   S138T Y15F, S39T, I72V, S163D, I172V, T206A, L213F, E246D, L250I, R269K, Y271YH I28L, N30K, S93T, I133V, I180V, S197A, D222N, I260V, S279P 
H2A025 11INT031 Unknown    V32I, S39T, S163N, I172V, T206A, E246D, L250I I28L, N30T, A41T, T60I, I133V, E167D, I180V, S197A, D222N, I259V, I260V, M275L, H280N 
H2A030 11INT032
Consensus 		Unknown    N30Q, S39T, A41S, I172M, L220F, E246D, L250I, G278S I28L, I133V, I180V, S197A, D222N, I259V, I260V, M275L, S277N, H280N 
  clone: 25 Unknown    N30Q, S39T, A41AS, I172IM, L220F, E246D, L250I, G278S I28L, I133V, I180V, S197A, D222N, I259V, I260V, M275L, S277N, H280N 
  clone: 26 Unknown    N30Q, S39T, A41AS, I172IM, L220F, E246D, L250I, G278S I28L, I133V, I180V, S197A, D222N, I259V, I260V, M275L, S277N, H280N 
H2A031 11INT033 Unknown    S39T, I72V, I172V, L220F, E246D, L250I, G278S K4R, I28L, A41T, M63T, S93T, I133V, I180V, S197A, D222N, F227Y, I259V, M275L, S279P, H280N 
H2A033 11INT034 Unknown    Y15F, S39T, I72V, I172V, L220F, E246D, L250I, G278S I28L, N30K, A41T, I133V, I180V, S197A, D222N, F227Y, I259V, M275L, S279P, H280N 
H2A034 11INT035 None    S17N, L31I, S39T, A41S, Q214H, L250I, G278S I28L, N30K, I50M, N55D, L58V, I133V, I180V, S197A, D222N, I259V, S279P, H280N 
  11INT036 Unknown    S17N, L31I, S39T, Q214H, L250I, G278GS I28L, N30K, I50M, N55D, L58V, I133V, I180V, S197A, D222N, I259V, S279P, H280N, G283GS 
  11INT037
Consensus 		Unknown    S17N, G27X, L31I, S39T, A41S, G140X, Q214H, L250I I28L, N30K, I50M, N55D, L58V, W132W*, I133V, I180V, S197A, D222N, I259V, S279P, H280N 
  clone: 32 Unknown    S17N, L31I, S39T, A41S, Q214H, L250I I28L, N30K, I50M, N55D, L58V, I133V, I180V, S197A, D222N, I259V, S279P, H280N 
  clone: 34 Unknown    S17N, L31I, S39T, A41S, G140X, Q214H, L250I G27GR, I28L, N30K, I50M, N55D, L58V, W132W*, I133V, I180V, S197A, D222N, I259V, S279P, H280N 
  11INT038
Consensus 		Unknown    S17N, L31I, S39T, A41X, R164X, Q214H, L250I, G278S I28L, N30K, I50M, N55D, L58V, W132W*, I133V, I180V, S197A, D222N, I259V, S279P, H280N 
  clone: 31 Unknown    S17N, L31I, S39T, A41X, R164RK, Q214H, L250I, G278GS I28L, N30K, I50M, N55D, L58V, W132W*, I133V, I180V, S197A, D222N, I259V, S279P, H280N 
  clone: 32 Unknown    S17N, L31I, S39T, A41S, Q214H, L250I, G278GS I28L, N30K, I50M, N55D, L58V, I133V, I180V, S197A, D222N, I259V, S279P, H280N 
H2A037 11INT039 None   G140R S39T, I50T, I84V, S163N, Q214H, E246D, L250I, M275V K4R, I28L, N30T, I133V, I180V, S197A, D222N, I259V, I260V, S279P 
  11INT040 None  R263K  N30S, S39T, I50T, I133T, S163N, Q214H, E246D, L250I, M275V, R284K K4R, G27R, I28L, G47E, G82R, S93T, G118S, I180V, S197A, D222N, R224Q, G239K, I259V, I260V, S279P 
  11INT041 None    N30S, S39T, I50T, S163N, Q214H, E246D, L250I, M275V K4R, I28L, S93T, I133V, I180V, S197A, D222N, I259V, I260V, S279P 
H2A052 11INT042 None    L2I, S39T, A215T, L220F, E246D, L250I, G278S K4R, I28L, I50IM, I133V, I180V, S197A, D222N, F227Y, I259V, M275L, H280N 
  11INT043
Consensus 		None    L2I, S39T, I172M, A215T, L220F, E246D, L250I, G278S K4R, I28L, A41T, I133V, I180V, S197A, D222N, F227Y, I259V, M275L, H280N 
  clone: 29 None    L2LI, S39T, I172IM, A215T, L220F, E246D, L250I, G278S K4R, I28L, A41AT, I133V, I180V, S197A, D222N, F227Y, I259V, M275L, H280N 
  clone: 30 None    L2I, S39T, I172IM, A215T, L220F, E246D, L250I, G278S K4R, I28L, A41AT, I133V, I180V, S197A, D222N, F227Y, I259V, M275L, H280N 
H2A053 11INT044
Consensus 		None    E3X, G27K, S39T, M63X, K71KR, I72V, G82X, E125X, M128X, G134GS, M154I, R164X, E167X, I172X, R199RK, T206TA, L220X, E246D, L250I, G254X, E285X, D286DN, G287X, E288X E11K, E13EK, E21K, I28L, N30K, A41T, G59GS, D64N, E69EK, E85K, S93ST, G118GS, W132W*, I133V, E136K, G149GE, E152K, I180V, S197A, M203MI, D222N, W235W*, G245GE, I259V, I260IV, H280N 
  clone: 23 None    G27K, S39T, K71R, I72V, M154I, I172V, L220F, E246D, L250I E3K, E11K, E13K, E21K, I28L, N30K, A41T, D64N, G82R, E85K, I133V, E136K, E152K, I180V, S197A, M203I, D222N, G245E, G254E, I259V, H280N, E285K, G287K, E288K 
  clone: 24 None   E125K G27K, S39T, M63I, I72V, W132*, G134S, M154I, R164K, R199K, T206A, W235*, E246D, L250I, D286N E11K, E21K, I28L, N30K, A41T, G59S, D64N, E69K, G82E, E85K, S93T, G118S, M128I, I133V, E136K, G149E, E152K, E167K, I180V, S197A, D222N, I259V, I260V, H280N 
  11INT045 None    S39T, I50IV, I72V, Q96N, I172V, T206A, E246D, L250I I28L, N30K, A41T, S93T, I133V, I180V, S197A, D222N, I259V, H280N 
  11INT046 None   R95K, E125K, G140R G27K, S39T, M63I, G70E, I72V, W132*, M154I, R164K, R166K, I172V, L220F, E246D, L250I E3K, E6K, E11K, E13K, E21K, I28L, N30K, R34K, A41T, E48K, G52K, G59S, D64N, E69K, G82E, E85K, D116N, M128I, I133V, E136K, G149E, E152K, E167K, E173K, I180V, S197A, D222N, G245R, I259V, G272E, D276N, H280N 
H2A054 11INT047
Consensus 		None   S138T N30Q, S39T, T60V, I72V, A119P, S163N, I172M, A215R, K219N, L220F, L250I, G278S V19M, S23A, I28L, A41P, L58I, S93T, I110V, I133V, V141I, T171S, I180V, S197A, D222N, F227Y, L234Q, T255A, I259V, I260V, M275L, S279P 
  clone: 29 None   S138ST N30Q, S39T, T60V, I72V, A119P, S163N, I172M, A215R, K219N, L220F, L250I, G278S V19M, S23A, I28L, A41P, L58I, S93T, I110V, I133IV, V141I, T171S, I180V, S197A, D222N, F227Y, L234Q, T255A, I259V, I260V, M275L, S279P 
  clone: 30 None   S138ST N30Q, S39T, T60V, I72V, A119P, S163N, I172M, A215R, K219N, L220F, L250I, G278S V19M, S23A, I28L, A41P, L58I, S93T, I110V, I133V, V141I, T171S, I180V, S197A, D222N, F227Y, L234Q, T255A, I259V, I260V, M275L, S279P 
  11INT048 None   S138T N30Q, S39T, T60V, I72V, A119P, N160NT, S163N, A215R, K219N, L220F, L250I, G278S V19M, S23A, I28L, L58I, S93T, I110V, I133V, V141I, T171S, I180V, S197A, D222N, F227Y, L234Q, T255A, I259V, I260V, M275L, S279P 
H2A055 11INT049
Consensus 		None    S17T, N30Q, S39T, I172M, L220F, L250I, D256E, G278S S23C, I28L, R34K, A41T, L58V, I180V, S197A, D222N, I259V, M275L, S279P, H280N 
  clone: 33 None    S17T, N30Q, S39T, I172M, L220F, L250I, D256E, G278S S23C, I28L, R34K, A41T, L58V, I180V, S197A, D222N, I259V, M275L, S279P, H280N 
  clone: 34 None    S17T, N30Q, S39T, I172M, L220F, L250I, D256E, G278S S23C, I28L, R34K, A41T, L58V, I180V, S197A, D222N, I259V, M275L, S279P, H280N 
  11INT050 None  R263K  S17T, N30Q, S39T, M63I, W131*, W132*, G134S, M154I, R166K, L220F, W243*, L250I, D256E, G278S E10K, E13K, S23C, G27R, I28L, R34K, A41T, G52R, L58V, G82R, G118S, M128I, G149R, I180V, S197A, D222N, G239E, I259V, M275L, S279P, H280N 
  11INT051
Consensus 		Unknown    S17T, G27X, N30X, S39T, I172M, L220F, L250I, D256E, G278S, H280X S23C, I28L, R34K, A41T, G52GR, L58V, I180V, S197A, D222N, I259V, M275L, S279P 
  clone: 34  Unknown    S17T, N30X, S39T, I172IM, L220F, L250I, D256E, G278S, H280X S23SC, G27GR, I28L, R34RK, A41T, G52GR, L58V, I180V, S197A, D222N, I259V, M275L, S279P 
  clone: 35 Unknown    S17T, N30Q, S39T, I172IM, L220F, L250I, D256E, G278S S23C, I28L, R34K, A41T, L58V, I180V, S197A, D222N, I259V, M275L, S279SP, H280N 
H2A056 11INT052
Consensus 		Unknown    I50L, T171X, I180X, I201X, Q214H, E246D, L250I V19I, I28L, N30K, A41P, N55D, I133V, E167D, I172L, D222N, I259V, M275L, H280N 
  clone: 37 Unknown    I50L, I180X, Q214H, E246D, L250I V19I, I28L, N30K, A41P, N55D, I133V, E167D, I172L, D222N, I259V, M275L, H280N 
  clone: 38 Unknown    I50L, I201IL, Q214H, E246D, L250I V19I, I28L, N30K, A41P, N55D, I133V, E167D, T171TS, I172L, I180T, D222N, I259V, M275L, H280N 
H2A057 11INT053 None   G140K S39T, M63I, K127R, W131*, W132*, I172V, T206A, E246D, L250I, M275V, G278S G27R, N30K, A41T, G52R, T60I, I133V, E167D, I180V, S197A, K221Q, D222N, R224Q, G239R, T255A, I259V, I260V 
  11INT054
Consensus 		Unknown    S39T, I172V, D193X, T206A, E246D, L250I, R269K, M275X N30K, A41T, T60I, I133V, E167D, I180V, S197A, K221Q, D222N, T255A, I259V, I260V 
  clone: 37 Unknown    S39T, I172V, T206A, E246D, L250I, R269K, M275X N30K, A41T, T60I, I133IV, E167D, I180V, S197A, K221Q, D222N, T255A, I259V, I260V 
  clone: 38 Unknown    S39T, I172V, T206A, E246D, L250I, R269K, M275X N30K, A41T, T60I, I133V, E167D, I180V, D193DN, S197A, K221Q, D222N, T255A, I259V, I260V 
H2A059 11INT055 None   G140R S23T, N30Q, S39T, T60V, M63I, I72V, W132*, G134S, S163N, I172V, A215R, K219N, L220F, L250I, G254R, G278S G27R, G70R, G82R, A119S, M128I, I133V, I180V, G192E, S197A, D222N, R224Q, F227Y, I259V, I260V, M275L 
  11INT056
Consensus 		Unknown    S23T, N30Q, N38X, S39T, T60V, I72V, I172V, I210X, A215R, K219N, L220F, L250I, G278S A119S, I133V, I180V, S197A, D222N, R224Q, F227Y, I259V, I260V, M275L 
  clone: 39 Unknown    S23T, N30Q, S39T, T60V, I72V, I172V, A215R, K219N, L220F, L250I, G278S A119S, I133V, I180V, S197A, D222N, R224Q, F227Y, I259V, I260V, M275L 
  clone: 40 Unknown    S23T, N30Q, N38NS, S39T, T60V, I72V, I172V, I210IV, A215R, K219N, L220F, L250I, G278S A119S, I133V, I180V, S197A, D222N, R224Q, F227Y, I259V, I260V, M275L 
H2A060 11INT057 None   S138T K4N, S17G, S23V, N30Q, H51Q, S163D, I172V, I175V, I180A, T206A, L213F, S218L, L220F, E246D, L250I, D256E, D270H, S277C, G278S, S279A, L281M, G283D, D286A H24Y, G27A, R34K, A41D, Q42K, S93T, E125D, V129A, I133V, A153S, E167D, N170V, T171S, S197A, I201V, D222N, F227Y, I259V, Q273K, M275L, H280D, E285Q, G287R 
  11INT058
Consensus 		None   S138T K4N, S17G, S23V, N30Q, N38X, H51Q, I72V, E125X, S163D, I172V, I175V, I180A, T206A, L213F, S218L, L220F, E246D, L250I, D256E, D270H, S277C, G278S, S279A, L281M, G283D, D286X H24Y, G27A, R34K, A41D, Q42K, S93T, V129A, I133V, A153S, E167D, N170V, T171S, S197A, I201V, D222N, F227Y, I259V, Q273K, M275L, H280D, E285Q, G287R 
  clone: 41 None   S138T K4N, S17G, S23V, N30Q, H51Q, I72V, S163D, I172V, I175V, I180A, T206A, L213F, S218L, L220F, E246D, L250I, D256E, D270H, S277C, G278S, S279A, L281M, G283D, D286A H24HY, G27A, R34K, A41D, Q42K, S93T, E125D, V129A, I133IV, A153S, E167D, N170V, T171S, S197A, I201V, D222N, F227Y, I259V, Q273K, M275L, H280D, E285Q, G287R 
  clone: 42 None   S138T K4N, S17G, S23V, N30Q, N38NS, H51Q, I72V, S163D, I172V, I175V, I180A, T206A, L213F, S218L, L220F, E246D, L250I, D256E, D270H, S277C, G278S, S279A, L281M, G283D, D286AT H24Y, G27A, R34K, A41D, Q42K, S93T, E125DN, V129A, I133V, A153S, E167D, N170V, T171S, S197A, I201V, D222N, F227Y, V251VI, I259V, Q273K, M275L, H280D, E285Q, G287R 
H2A061 11INT059
Consensus 		None    S39T, I72V, I172V, A215T, L220F, D222K, E246D, L250I V19I, N30K, R34K, A41P, N55D, L58V, S93T, I133V, E167D, I180V, S197A, K221Q, I259V, I260V, M275L, S277N 
  clone: 51 None    S39T, I72V, I172V, A215T, L220F, D222K, E246D, L250I V19I, N30K, R34K, A41P, N55D, L58V, S93T, I133V, E167D, I180V, S197A, K221Q, I259V, I260V, M275L, S277N 
  clone: 52 None    S39T, I72V, I172V, A215T, L220F, D222K, E246D, L250I V19I, N30K, R34K, A41P, N55D, L58V, S93T, I133V, E167D, I180V, S197A, K221Q, I259V, I260IV, M275L, S277SN 
  11INT060
Consensus 		None    S39T, I72V, A80X, S163X, T171X, I172V, A215T, L220F, D222K, E246D, L250I E6ED, A8AV, V19I, N30K, R34K, A41P, N55D, L58V, S93T, I133V, E167D, I180V, S197A, K221Q, I259V, I260IV, M275L, S277N 
  clone: 43 None    S39T, I72V, I172V, A215T, L220F, D222K, E246D, L250I E6D, A8V, V19I, N30K, R34K, A41P, N55D, L58V, S93T, I133V, E167D, T171TP, I180V, S197A, K221Q, I259V, M275L, S277SN 
  clone: 44 None    S39T, I72V, A80X, S163SN, I172V, A215T, L220F, D222K, E246ED, L250I V19I, N30K, R34K, A41P, N55D, L58V, S93T, I133V, E167ED, I180V, S197A, K221Q, I259V, I260V, M275ML, S277SN 
H2A062 11INT061
Consensus 		None    I50T, I172V, K219R, L220F, E246D, L250I, R262K, R269K V19I, I28L, N30K, R34K, A41P, S93ST, I133V, I180V, S197A, D222N, I259V, I260V, M275L, H280N 
  clone: 53 None    I50T, I172V, K219R, L220F, E246D, L250I, R262K, R269K V19I, I28L, N30K, R34K, A41P, I133V, I180V, S197A, D222N, I259V, I260V, M275L, H280N 
  clone: 54 None    I50T, I172V, K219R, L220F, E246D, L250I, R262K, R269K V19I, I28L, N30K, R34K, A41P, S93ST, I133V, I180V, S197A, D222N, I259V, I260V, M275L, H280N 
  11INT062
Consensus 		None    I50T, I72IV, E125X, I172V, I180X, K219R, L220F, E246D, L250I, R262K, R269K V19I, I28L, N30K, R34K, A41P, I133V, E167ED, S197A, D222N, I259V, I260V, M275L, H280N 
  clone: 25 None    I50T, I172V, K219R, L220F, E246D, L250I, R262K, R269K V19I, I28L, N30K, R34K, A41P, I133V, I180V, S197A, D222N, I259V, I260V, M275L, H280N 
  clone: 26 None   E125EK I50T, I72IV, I172V, I180X, K219R, L220F, E246D, L250I, R262K, R269RK V19I, I28L, N30K, R34K, A41P, I133V, E167ED, S197A, D222N, I259V, I260V, M275L, H280N 
H2A063 11INT063
Consensus 		None    V19X, S39T, L58X, Q124X, I172X, T206A, I210V, K219KT, E246D, L250I, M275MV I28L, N30K, A41T, I180V, S197A, I201IV, D222N, H280N 
  clone: 21 None    S39T, T206A, I210V, E246D, L250I V19I, I28L, N30K, A41T, I180V, S197A, I201V, D222N, H280N 
  clone: 22 None    S39T, Q124R, I172M, T206A, I210V, K219T, E246D, L250I, M275V I28L, N30K, A41T, L58I, I180V, S197A, D222N, H280N 
H2A064 11INT064 None    S39T, I172M, Q214H, A215T, K236Q K20Q, I28L, N30K, L58V, I133V, I180V, S197A, D222N, F227Y, L234R, I259V, I260V, S279T, H280N 
  11INT065
Consensus 		None    S39T, I172M, I180X, Q214H, A215X, K236Q K20Q, I28L, N30K, L58V, I133V, S197A, I201V, D222N, F227Y, L234R, I259V, I260V, S279T, H280N 
  clone: 23 None    S39T, I172M, I180X, Q214H, K236Q K20Q, I28L, N30K, L58V, I133V, S197A, I201V, D222N, F227Y, L234R, I259V, I260V, S279T, H280N 
  clone: 24 None    S39T, I172M, I180X, Q214H, A215AT, K236Q K20Q, I28L, N30K, L58V, I133V, S197A, I201V, D222N, F227Y, L234R, I259V, I260V, S279T, H280N 
H2A065 11INT066 None    S39T, Q96N, I172M, L220F, E246D, L250I, G278S V19I, I28L, N30K, A41T, I133V, I180V, S197A, D222N, I260V, M275L, S279P, H280N 
H2A066 11INT067 None    S39T, I72V, I172V, T206A, E246D, L250I V19I, I28L, N30K, A41P, I133V, S197A, D222N, T255S, S279P, H280N 
H2A068 11INT068
Consensus 		None   S138T, G140E S17T, S39T, W132*, I172V, D222K S23C, G27R, I28L, N30T, G52K, L58I, G82K, G118S, I133V, I180V, S197A, K221Q, R224Q, G239R, I259V, M275L 
  clone: 63 None   S138T, G140E S17T, S39T, W132*, I172V, D222K S23C, G27R, I28L, N30T, G52K, L58I, G82K, G118S, I133V, I180V, S197A, K221Q, R224Q, G239R, I259V, M275L 
  clone: 64 None   S138T, G140E S17T, S39T, W132*, I172V, D222K S23C, G27R, I28L, N30T, G52K, L58I, G82K, G118S, I133V, I180V, S197A, K221Q, R224Q, G239R, I259V, M275L 
H2A071 11INT069
Consensus 		None    S39T, I172V, F212X, Q214H, E246D, L250I V19I, I28L, N30K, A41P, N55D, I133V, E167ED, I180V, S197A, D222N, I259V, H280N 
  clone: 67 None    S39T, I172V, Q214H, E246D, L250I V19I, I28L, N30K, A41P, N55D, I133V, I180V, S197A, D222N, I259V, H280N 
  clone: 68 None    S39T, I172V, Q214H, E246D, L250I V19I, I28L, N30K, A41P, N55D, I133V, E167ED, I180V, S197A, F212FY, D222N, I259V, H280N 
  11INT070
Consensus 		None    S39T, A119X, I172V, Q214H, E246D, L250I V19I, I28L, N30K, A41P, N55D, I133V, E167D, I180V, S197A, D222N, I259V, H280N 
  clone: 36 None    S39T, I172V, Q214H, E246D, L250I V19I, I28L, N30K, A41P, N55D, I133V, E167ED, I180V, S197A, D222N, I259V, H280N 
  clone: 37 None    S39T, A119AT, I172V, Q214H, E246D, L250I V19I, I28L, N30K, A41P, N55D, I133V, E167D, I180V, S197A, D222N, I259V, H280N 
H2A072 11INT071
Consensus 		None   S138T E11D, S17G, S23V, N30Q, S163D, I172V, I175V, A215T, S218L, L220F, L250I, D256E, E274X, S277C, G278S, S279A, G283D, E285*, D286T V19I, E21D, A41D, Q42K, L58V, S93T, E125D, I133V, E167D, N170V, T171S, I180T, S197A, I201V, N217K, K221Q, D222N, R224Q, F227Y, V251I, I259V, I260V, D270Q, Q273K, M275L, H280D, L281V, G287R 
  clone: 69 None   S138T S17G, S23V, N30Q, S163D, I172V, I175V, A215T, S218L, L220F, L250I, D256E, S277C, G278S, S279A, G283D, E285*, D286T V19I, E21D, A41D, Q42K, L58V, S93T, E125D, I133V, E167D, N170V, T171S, I180T, S197A, I201V, N217K, K221Q, D222N, R224Q, F227Y, V251I, I259V, I260V, D270Q, Q273K, E274D, M275L, H280D, L281V, G287R 
  clone: 70 None   S138T E11D, S17G, S23V, N30Q, S163D, I172V, I175V, A215T, S218L, L220F, L250I, D256E, S277C, G278S, S279A, G283D, E285*, D286AT V19I, E21D, A41D, Q42K, L58V, S93T, E125D, I133V, E167D, N170V, T171S, I180T, S197A, I201V, N217K, K221Q, D222N, R224Q, F227Y, V251I, I259V, I260V, D270Q, Q273K, M275L, H280D, L281V, G287R 
H2A074 11INT072 None    S39T, I180A, A215S, L220F, E246D, L250I V19I, S23A, I28L, N30K, A41T, N55D, I133V, E167D, I172L, S197A, L200F, D222N, F227Y, I259V, I260V, M275L, S279T, H280N, G287GR 
H2A075 11INT073
Consensus 		None    L2I, N30Q, S39T, I72V, I172V, L220F, D222K, E246D, L250I I28L, A41P, S93T, I133V, H156L, I180V, S197A, F227Y, I259V, I260V, S279P, G283S 
  clone: 32 None    L2I, N30Q, S39T, I72V, I172V, L220F, D222K, E246D, L250I I28L, A41P, S93T, I133V, H156L, I180V, S197A, F227Y, I259V, I260V, S279P, G283GS 
  clone: 33 None    L2I, N30Q, S39T, I72V, I172V, L220F, D222K, E246D, L250I I28L, A41P, S93T, I133V, H156L, I180V, S197A, F227Y, I259V, I260V, S279P, G283GS 
  11INT074
Consensus 		None    L2I, N30Q, S39T, I72V, I133X, S163X, I172V, L220F, D222K, E246D, L250I, H280X I28L, A41P, S93T, H156L, I180V, S197A, F227Y, I259V, I260V, S279P, G283S 
  clone: 40 None    L2I, N30Q, S39T, I72V, I133X, I172V, L220F, D222K, E246D, L250I I28L, A41P, S93T, H156L, I180V, S197A, F227Y, I259V, I260V, S279P, H280HN, G283GS 
  clone: 41 None    L2I, N30Q, S39T, I72V, S163N, I172V, L220F, D222K, E246D, L250I I28L, A41P, S93T, I133V, H156L, I180V, S197A, F227Y, I259V, I260V, S279P, G283S 
H2A076 11INT075
Consensus 		Unknown    S39T, I72V, I172V, Q214H, E246D, L250I, M275V V19I, I28L, N30K, A41T, N55D, S93T, I133V, E167D, I180V, S197A, D222N, I259V, H280N 
  clone: 42 Unknown    S39T, I72V, I172V, Q214H, E246D, L250I, M275V V19I, I28L, N30K, A41T, N55D, S93ST, I133V, E167D, I180V, S197A, D222N, I259V, H280N 
  clone: 43 Unknown    S39T, I72V, I172V, Q214H, E246D, L250I, M275V V19I, I28L, N30K, A41T, N55D, S93ST, I133V, E167D, I180V, S197A, D222N, I259V, H280N 
H2A077 11INT076 Unknown   S138T S39T, I72V, M154MI, I172V, T206A, D222X, E246D, L250I, R269K V19VI, I28IV, A41P, S93T, I133V, E152EQ, I180V, K221Q, T255S, I259V, I260V, M275L, H280HN 
H2A080 11INT077 Unknown    S39T, I172V, Q214H, A215T, S218L, E246D, L250I, R269K I28L, N30K, A41T, I50M, I133V, I180V, S197A, D222N, I259V, I260V, H280N 

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