<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Oliveira (2012)
Title Genetic diversity and drug resistance profiles in HIV type 1- and HIV type 2-infected patients from Cape Verde Islands.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 27
NumPts 27
Subtype G, CRF02_AG, B, F, A, C

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
05CVHAN1 05CVHAN1 None None   R83K, I142T, D177DG, G196E, T200A, R211K, A272P, T286TA, E291ED, V292I, I293V, E297EAKT  
05CVHAN11 05CVHAN11 None None   E248Q, A272P, K275R, I293V  
05CVHAN14 05CVHAN14 D4T, 3TC NVP   V35T, E36A, V60I, K122E, D123S, K173T, Q174K, D177E, I178M, V189I, T200A, Q207G, R211K, V245Q, E248N, D250E, A272P, T286A, E291D, V292I, I293V, E297A  
05CVHAN16 05CVHAN16 AZT, 3TC NVP   K11S, V35T, I37X, T39K, E40D, V60I, A62X, T69X, D121Y, K122E, I142V, S162A, K173T, Q174K, D177E, I178L, T200S, Q207N, R211K, V245Q, T286A, E291D, V292I, I293V, P294T  
05CVHAN17 05CVHAN17 None None  V179E K11Q, V35T, I50V, V60I, A98S, K122A, D123N, I135L, S162C, K173T, Q174K, D177E, T200A, Q207EK, R211S, V245Q, E248D, D250E, S251SI, A272P, T286A, E291D, V292I, I293V, E297A I37N, C38R, M41K 
05CVHAN19 05CVHAN19 D4T, 3TC NVP   V8I, V35T, V60I, A98S, V106I, K122E, R125K, I135V, K173A, Q174K, D177E, I178M, T200E, Q207K, R211S, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, I293V, E297A  
05CVHAN20 05CVHAN20 None None T215S  T7S, P9S, V10L, K11N, E36S, I50V, V60I, A98S, I135L, K166R, K173T, Q174R, D177E, I178M, T200A, Q207K, R211S, F214V, V245Q, E248N, D250E, S251I, A272P, T286A, E291D, V292I, I293V, E297A K13T, V35Y, I37P, N81NH, I159*L 
05CVHAN21 05CVHAN21 D4T, 3TC NVP   K11S, V35T, V60I, A98S, I135L, K166R, K173T, Q174R, D177E, I178V, T200A, Q207K, R211K, V245VELQ, A272P, T286TA, E291ED, V292I, I293V, E297EAKT  
05CVHAN25 05CVHAN25 None None   V35T, I50V, V60I, A98S, K122E, D123S, I135L, K173T, Q174E, D177E, T200A, Q207K, R211S, V245Q, E248D, D250E, S251SI, A272S, K277R, T286A, E291D, V292I, I293V, E297A  
05CVHAN28 05CVHAN28 None None  V179E V35T, E40D, K49R, A98S, D123E, I135L, K173I, Q174K, D177E, T200A, Q207E, R211S, V245Q, E248D, D250E, A272P, K277R, T286A, E291D, V292I, E297A  
05CVHAN3 05CVHAN3 None None   V35T, T39A, E40D, V118I, K122Q, I135T, I142V, K173I, Q174K, D177E, I178L, V179VI, Q207E, R211K, F214L, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, I293V, E297A  
05CVHAN31 05CVHAN31 None None M41L  V35T, T39A, E40D, V60I, A98S, K122E, D123A, I135T, S162A, K173I, Q174K, D177E, T200A, Q207K, R211S, V245Q, E248D, D250E, A272P, T286A, E291D, V292T, I293V, P294Q, E297A, E298D A299S 
05CVHAN32 05CVHAN32 None None   V35T, T39A, E40D, V118I, I135T, K173I, Q174K, Q207E, R211K, F214L, V245Q, E248N, D250E, L260I, A272P, T286A, E291D, V292I, I293V, E297A K13F, G15R, D17V, W24R 
05CVHAN35 05CVHAN35 None None   P14A, V35T, E40D, V60I, K122P, D123S, I135T, S162A, Q174E, D177E, I195L, T200A, Q207E, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, I293V, T296S T139P 
05CVHAN40 05CVHAN40 None None   V21D, V35T, I50V, V60I, A98S, K122KQ, I135L, S162C, K173I, Q174K, D177E, T200A, Q207E, R211S, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, I293V, E297A V10G, K11G, G18V, W24M, L303LP 
05CVHAN41 05CVHAN41 D4T, 3TC NVP   K11S, T39A, I142V, S162A, K173A, Q174K, D177E, I178M, I195L, R211K, V245Q, E248D, A272P, K277R, V292VI, I293V  
05CVHAN42 05CVHAN42 None None   V35T, E36A, T39E, E40D, S48T, V60I, K122E, D123S, K173I, D177E, T200A, Q207E, R211K, V245Q, D250E, T286A, E291D, V292I, I293V  
05CVHAN43 05CVHAN43 None None   V35S, S162A, R172K, K173R, Q174K, D177E, G196E, Q207E, R211N, F214L, V245Q, A272P, V276I, T286A, E291D, V292I, I293V, P294T L34~, G155R 
05CVHAN45 05CVHAN45 None None   V35T, C38X, T39S, I50X, P59X, V60I, T69X, K122E, D123N, K173T, Q174K, D177E, I178IM, T200A, Q207E, R211K, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, I293V, E297R L12I, K13R, K22T, W24A 
05CVHAN49 05CVHAN49 AZT None   K11S, P14A, V21G, T27A, V35T, T39A, E40D, V60I, D121H, K122E, I135L, K173I, Q174K, D177E, I178M, T200A, Q207K, R211S, V245Q, E248D, D250E, A272P, K277R, T286A, E291D, E297A W24G 
05CVHAN51 05CVHAN51 None None   V21G, V35T, T39R, E40D, K64R, K122E, D123S, I135T, I142V, S162C, K173A, Q174K, P176Q, T200A, Q207A, R211S, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, P294T L12I, K13I, M16I, W24R 
05CVHAN52 05CVHAN52 Unknown Unknown   V35T, V60I, A98S, K122E, D123S, K173A, Q174K, D177E, G196E, T200A, Q207K, R211A, V245Q, D250E, A272P, T286A, E291D, V292I, I293V, E297A  
05CVHAN53 05CVHAN53 Unknown Unknown   V21I, V35T, T39A, I50V, V60I, A98S, D123N, I132V, I135V, T165I, K173A, Q174K, D177E, G196E, T200A, Q207E, R211S, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, I293V, E297A  
05CVHAN54 05CVHAN54 Unknown Unknown   V35T, E36D, T39K, K122E, D123N, I135T, I142V, K173I, Q174K, Q207A, R211S, F214L, V245K, P247A, A272P, K277R, T286A, E291D, V292I, I293V, E297R  
05CVHAN55 05CVHAN55 Unknown Unknown K65R, T69~, K219R K103N, Y181C V35I, W88C, A98S, K122E, I135T, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, H221Y, V245Q, E248D, D250E, K281R, T286A, E291D, V292I, I293V, P294T, E300Q  
05CVHAN7 05CVHAN7 None None   K20E, V35T, E36A, E40D, K49R, V60I, K122E, D123S, K173T, Q174K, D177E, I178M, T200A, Q207E, R211K, V245Q, E248N, D250E, A272P, T286A, E291D, V292I, I293V, E297A  
05CVHAN8 05CVHAN8 None None  K103N V35T, T39A, E40D, V60I, A98S, K122E, D123N, I135T, K173M, Q174K, D177E, G196E, T200A, Q207K, R211S, F214L, V245Q, E248D, D250E, A272P, T286A, V292I, I293V, E297P