<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Paolucci (2014)
Title Phylogenetic analysis of HIV type 1 CRF02_AG in multiple genes in Italian and African patients living in Italy.
Citation ARHR
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 61
NumPts 61
Subtype CRF02_AG

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
PV10_2008 PV10_2008 None   T97A K14R, V31I, M50I, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136T, S195T, V201I, T206S, I220L, L234I, D256Y  
PV10_2009 PV10_2009 None   T97A K14R, V31I, M50I, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136T, S195T, V201I, T206S, I220L, L234I, D256Y  
PV14_2004 PV14_2004 None    N18T, L45Q, I72V, L74I, T112V, T125A, G134N, I135V, K136T, G163A, V201I, K215N, L234I, D256E  
PV14_2005 PV14_2005 None    L45Q, I72V, L74I, T112V, T125A, G134N, I135V, K136T, G163A, V201I, K215N, L234I, D256E  
PV14_2006 PV14_2006 None    N18T, R20E, L45Q, I72V, L74I, T112V, T125A, G134N, I135V, K136T, G163A, V201I, K215N, L234I, D256E  
PV14_2007 PV14_2007 None   T97A L45Q, I72V, L74I, T112V, T125A, G134N, I135V, K136T, G163A, V201I, K215N, L234I, D256E  
PV14_2008 PV14_2008 None    L45Q, I72V, L74I, T112V, T125A, G134N, I135V, K136T, G163A, V201I, K215N, L234I, D256E  
PV14_2009 PV14_2009 None    A23V, L45I, I72V, L74I, I84M, T112V, T125A, A129V, G134N, I135V, K136T, G163A, V201I, K215N, L234I, D256E  
PV14_2010 PV14_2010 None    E10D, R20K, L45Q, I72V, L74I, I84V, T112V, T125A, G134N, I135V, K136T, M154I, G163A, V201I, L234I, D256E  
PV17_2006 PV17_2006 None    E10Q, K14R, R20K, S24N, V31I, M50T, L101I, T112V, S119P, T122I, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I  
PV17_2007 PV17_2007 None    E10Q, K14R, R20K, S24N, V31I, M50T, L101I, T112V, S119P, T124A, T125A, G134N, I135V, K136T, Q177H, V201I, T206S, L234I  
PV17_2008 PV17_2008 None    K14R, R20K, S24N, V31I, M50T, L101I, T112V, S119P, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I, D256Y  
PV17_2009 PV17_2009 None    K14R, R20K, S24N, V31I, M50T, L101I, K103R, T112V, S119P, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I, D256Y  
PV17_2011 PV17_2011 None    E10D, K14R, R20K, S24N, V31I, M50T, L101I, K103KR, T112V, S119P, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I  
PV18_2006 PV18_2006 None   T97A K14R, V31I, M50T, L101I, T112I, T124A, T125A, G134N, K136T, E157Q, V201I, A205S, T206S, L234I E85K 
PV18_2007 PV18_2007 None   T97A K14R, V31I, M50T, L101I, T112I, T124A, T125A, G134N, K136T, V201I, A205S, T206S, L234I  
PV18_2008 PV18_2008 None   T97A K14R, V31I, L101I, T112I, T124A, T125A, G134N, K136T, E157Q, V201I, A205S, T206S, L234I  
PV1_2006 PV1_2006 None    K14R, R20K, V31I, M50T, L101I, T112V, T124N, T125A, G134N, I135V, K136T, I200M, V201I, L234I D207V, Q209L 
PV1_2007 PV1_2007 None    K14R, R20K, V31I, M50T, L101I, T112V, T124N, T125A, G134N, I135V, K136T, K173R, I200M, V201I, T206S, L234I  
PV1_2008 PV1_2008 None    K14R, R20K, V31I, L101I, T112V, T124N, T125A, G134N, I135V, K136T, K173R, I200M, V201I, T206S, L234I  
PV1_2009 PV1_2009 None    K7R, K14R, R20K, V31I, L101I, T112V, T124N, T125A, G134N, I135V, K136T, K173R, I200M, V201I, T206S, L234I  
PV1_2010 PV1_2010 None    K7R, K14R, R20K, V31I, L101I, T112V, T124N, T125A, G134N, I135V, K136T, K173R, I200M, V201I, T206S, L234I  
PV22_2011 PV22_2011 None  N155S T97A E11D, V31I, M50I, L101I, K111R, T112V, T124A, T125A, G134N, K136T, E157A, I162V, V201I, T206S, D207G, I208F, Q209P, K215N, L234I K159M, K160I, R166P, A175P 
PV25_2007 PV25_2007 None    K14R, V31I, M50T, L101I, K103R, T112V, T124A, T125A, G134N, I135V, K136T, V201I, A205S, T206S, L234I  
PV25_2008 PV25_2008 None    K14R, V31I, M50T, L101I, K103R, T112V, T124A, T125A, G134N, I135V, K136T, V201I, A205S, T206S, L234I  
PV25_2010 PV25_2010 None    K14R, V31I, M50T, L101I, K103R, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, I208L, L234I  
PV26_2005 PV26_2005 None    K14R, S24N, V31I, I72T, L101I, T112V, S119P, T122I, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I  
PV26_2006 PV26_2006 None    K14R, S24N, V31I, I72T, L101I, T112V, S119P, T122I, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I  
PV26_2007 PV26_2007 None    K14R, S24N, V31I, L101I, T112V, S119P, T122I, T124A, T125A, G134N, K136T, V201I, T206S, L234I  
PV26_2008 PV26_2008 None    K14R, S24N, V31I, I72T, L101I, T112V, S119P, T122I, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I  
PV26_2009 PV26_2009 None    K14R, S24N, V31I, I72T, L101I, T112V, S119P, T122I, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I  
PV27_2005 PV27_2005 None   T97A K14R, K34R, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136T, I203M, T206S, L234I  
PV27_2006 PV27_2006 None   T97A K14R, K34R, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136T, I203M, T206S, L234I  
PV27_2007 PV27_2007 None    K14R, A23D, K34R, I72V, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, I203M, T206S, L234I  
PV27_2008 PV27_2008 None    E10D, I72V, T112V, T124A, T125A, G134N, I135V, K136T, V201I, I203M, T206S, L234I  
PV27_2009 PV27_2009 None    K14R, I72V, K111R, T112V, T124A, T125A, G134N, K136T, E157K, V201I, I203M, T206S, K211R, L234I  
PV27_2010 PV27_2010 None    K14R, I72V, K111R, T112V, T124A, T125A, G134N, I135V, K136T, V201I, I203M, T206S, L234I  
PV28_2009 PV28_2009 None   F121FI K14R, V31I, M50I, I72V, L101I, T112V, S119P, T124A, T125A, G134N, I135V, K136T, V201I, T206S, T218I, L234I  
PV2_2006 PV2_2006 None    K14R, K34R, L101I, K111R, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I  
PV2_2007 PV2_2007 None    K7R, K34R, L101I, K111R, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I  
PV2_2008 PV2_2008 None    K14R, K34R, L101I, T112V, T124A, T125A, G134N, K136T, V201I, T206S, L234I A8D 
PV2_2009 PV2_2009 None    K34R, L101I, T112V, T124A, T125A, G134N, K136T, V201I, T206S, L234I  
PV2_2010 PV2_2010 None    K34R, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I, D253V  
PV2_2011 PV2_2011 None    K34R, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I, D253V  
PV36_2007 PV36_2007 None    K14R, R20K, V31I, M50L, L101I, K111R, T112V, T124A, T125A, G134N, K136T, V201I, T206S, L234I  
PV36_2008 PV36_2008 None    K14R, R20K, V31I, M50L, L101I, T112V, T124A, T125A, G134N, K136T, V201I, T206S, L234I  
PV36_2009 PV36_2009 None    K14R, V31I, M50L, L101I, T112I, T124A, T125A, G134N, I135V, K136T, V201I, T206S, L234I, I257V  
PV36_2011 PV36_2011 None    K14R, R20K, S24N, V31I, M50L, L101I, T112V, T124A, T125A, G134N, K136T, V201I, T206S, L234I, I257V  
PV37_2006 PV37_2006 None    K14R, V31I, S57G, L74I, L101I, T112V, T124A, T125A, K127Q, G134N, I135V, K136T, G163T, V201I, T206S, L234I  
PV37_2007 PV37_2007 None    K14R, V31I, L101I, G106A, T112V, S123C, T124N, G134N, I135V, K136T, G163T, K173R, V201I, T206S, L234I  
PV37_2008 PV37_2008 None    K14R, V31I, I72V, A80T, L101I, G106A, T112I, S123C, T125A, G134N, I135V, K136T, I162L, G163A, K173R, V201I, T206S, L234I T124D 
PV37_2009 PV37_2009 None    K14R, V31I, I72V, L101I, G106A, T112V, S123C, T124N, G134N, I135V, K136T, G163A, K173R, V201I, T206S, L234I  
PV37_2010 PV37_2010 None    K14R, V31I, S57G, L74I, L101I, T112V, T124A, T125A, K127Q, G134N, I135V, K136T, G163T, V201I, T206S, L234I L241I 
PV38_2009 PV38_2009 None    K14R, D25E, V31I, L101I, T112V, T124A, T125A, G134N, I135V, K136T, G163A, V201I, T206S, K211R, T218I, I220V, N222S, L234I, S255N  
PV3_2010 PV3_2010 None    K14R, V31I, D41N, S57G, I72V, E96D, L101I, T112I, T124A, T125A, G134N, K136T, V201I, T206S, L234I  
PV40_2008 PV40_2008 None    L28I, S39C, M50I, Y99F, L101I, K103R, T112V, T124A, T125A, G134N, I135V, K136T, G163E, V201I, L234I, N254K  
PV40_2009 PV40_2009 None    L28I, S39C, M50I, Y99F, L101I, K103R, T112V, T124A, T125A, G134N, I135V, K136T, G163E, V201I, L234I, N254K  
PV41_2009 PV41_2009 None   L74M K14R, S17N, V31I, T112I, T124A, T125A, G134N, K136T, V201I, A205S, T206S, L234I, D256E  
PV5_2009 PV5_2009 None    K14R, R20K, A21T, D25E, V31I, M50T, L101I, T112V, S119T, T124A, T125A, G134N, I135V, K136T, G163A, V201I, T206S, L234I, S255N  
PV9_2010 PV9_2010 None    K14R, V31I, A38N, L45Q, I72V, P90S, L101I, T112I, T125A, K127R, G134N, I135V, K136T, V201I, I203L, I204L, A205P, T206S, L234I  
PV9_2011 PV9_2011 None    K14R, V31I, A38N, L45Q, I72V, P90S, L101I, T112I, T125A, K127R, G134N, I135V, K136T, V201I, I203L, I204L, A205P, T206S, L234I