Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Sharma (2016)
Title Molecular epidemiology of HIV-1 among the HIV infected people of Manipur, Northeastern India: emergence of unique recombinant forms.
Citation J Med Virol
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 64
NumPts 64
Subtype C, B, Unknown, B + C


Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
MU006 MU006 Unknown Unknown   E6X, V10X, G15X, M16K, D17G, K20R, V21X, P25X, I31T, V35T, T39N, V60I, R72X, K122E, I135V, E138A, S162C L12F, L26I, E29G, L34F, I47V, I63T, L92I, S191F, L205M 
MU011 MU011 Unknown Unknown   V35T, T39E, S48T, V60I, T107S, D121Y, K122E, K173A, Q174R, D177E, V179I, T200A, Q207E, R211K, P243X, V245T, P247L, E248Q I244T, T253S, V254M 
MU012 MU012 Unknown Unknown  V179D I31V, I135V, S162C S191F 
MU013 MU013 Unknown Unknown   I135V, K154R, S162C, E204D, R211K, W212L, E233D, V245Q, P247Q, E248K, K249R P217T, D250Y, N255I 
MU015 MU015 Unknown Unknown   V35T, T39D, K122E, R125K, K126R, T131P, I135V, I142L D121R, T128S, A129V, R143K 
MU016 MU016 Unknown Unknown K219R  V35T, E36A, T39D, S48T, V60I, K102R, D121Y, K122E, K166R, K173A, Q174R, D177E, V179I, T200A, H221Y, P225T, P236X, K238X, V245Q, E248Q L205Q, Q207~, G213D, F214~, K220~, E224~, P226S, V241D, P247~ 
MU018 MU018 Unknown Unknown T215S  V35T, E36A, T39D, V60I, D121Y, K122E, I135V, S162Q, F171X, R172X, K173D, Q174K, D177E, I178X, V179I, Y188X, L193X, Q197X, T200A, E204R, Q207E, R211K, P225T, E233D, K238R, T240P, V245Q E194R, W212V, F214~, P217N, D218Q, E224R, P226L, H235I, P236S, W239G, I244Y 
MU020 MU020 Unknown Unknown M41L, D67N, M184I, T215Y A98G, K103N, Y181C, G190A I5L, K20R, V35T, T39E, E44D, S48T, V90I, V118I, K122E, D123E, I135T, T200A, Q207E, L210S, R211K, D218E L12F, P150S, S191F 
MU022 MU022 Unknown Unknown  V179D, G190A T27S, V35T, T39D, V60I, K102R, T107S, D121H, K122E, S162C, E169D, T200A, Q207E, R211K, V245L W24L, E29V, K30T, L34F, M41I, I63L, S191F 
MU023 MU023 Unknown Unknown M41L, D67N, M184V, T215Y K103N, Y181V E28K, V35T, T39D, E44D, S48T, V60I, W88C, I94L, D121Y, K122E, S162A, D177E, V179I, T200A, Q207E, L210S, R211K, D218X, H221Y, E224X, P225X L234P 
MU024 MU024 Unknown Unknown M184V, K219E V106M, V179E V35T, E36A, T39D, S48T, V60I, K101T, K102H, T139K, S162C, I178L, E204G, L210X, R211K, T216P, K223Q, E224G, L228V, Y232H, E233D, K238Q, Q242R, P243L, V245R, P247Q, E248N, D250G, K259E, L260I I159L, Q161P, L168R, G213D, P217H, K220Q, P226S, W229G, G231R, L234~, H235S, P236S, D237G, I244Q, Q258Y 
MU026 MU026 Unknown Unknown   D121H, K122E, I135V, S162C, K173A, P176T, T200A, Q207E, R211K E89G, V90F, Q91D, L92F, H96P, L100P, V106K, D110E, D113E, Y115D, S191F, L234V 
MU029 MU029 Unknown Unknown   V35T, E36A, T39D, K122E, I135T, S162C, I167X, K173X, Q197T, T200S, L205X, Q207E, L210X, R211K, K219X, K220X, K223R I195Q, H198Q, R199~, E224P, P226F, L228G 
MU032 MU032 Unknown Unknown V75L  S3I, V35T, E36A, T39D, V60I, T107S, D121Y, K122E, I135V, S162Q, M164X, I167X, E169Q, K173X, D177Q, I178X, V179I, Q182X, V189X, L193X, Q197X, T200X, L205X, R206K, Q207R, L210X, R211S, K219T, E224N N81I, Q85H, R143M, E194R, G213D, F214Y, T216~, P217~, D218Q 
MU035 MU035 Unknown Unknown L74I, M184V, T215Y Y181C V60I, T69N, V90I, K102Q, V111I, D121Y, K122E, I135T, S162H, K166R, K173A, D177E, V179I, T200A, Q207E, R211K, F214L, H221Y K49T, A62S, I63T, S191F, W239R 
MU036 MU036 Unknown Unknown M41L, M184V, T215Y Y181C P4S, V35T, T39D, S48T, V60I, T69N, V90I, K102Q, V111I, D121Y, K122E, I135T, S162H, K166R, K173A, D177E, V179I, T200A, Q207E, R211K, F214L, H221Y, V245L S191F 
MU039 MU039 Unknown Unknown  V108I, L234I W88R, V90I, V106I, K122E, K166R, K173A, Q174R, I178M, G196R, T200A, Q207E, R211K T84S, E89K, L92I, G93R, L100P, F116V, R143K, S191F, W229Q, G231R 
MU040 MU040 Unknown Unknown M184V, T215F A98G, K103N, V108I, K238N V60I, K102R, D121Y, K122E, I135L, K166R, K173A, Q174R, D177E, T200A, Q207E, R211K, L228R, V245Q Y56N, E79V 
MU041 MU041 Unknown Unknown   V35T, E36A, T39D, S48T, V60I, K102R, D121Y, K122E, K166R, K173A, Q174R, D177E, V179I, T200A, E203G, Q207E, R211K, K238X, W239X, P243X, V245Q, E248X L234P 
MU044 MU044 Unknown Unknown   S162H, Q174E, T200A, Q207K, R211K, V245X, K249R, S251C L246A 
MU045 MU045 Unknown Unknown  F227L S48T, V60I, T69N, K101R, D121Y, K122E, K166R, K173A, D177E, T200A, Q207E, R211K, L228P G51R, S191F 
MU046 MU046 Unknown Unknown   V35T, T39N, S48T, V60I, D121H, K122E, K166E, P170S, K173A, P176S, V189A Q145P, G152A, Q161K 
MU049 MU049 Unknown Unknown D67N, K70R, L74I, M184V, K219E Y181C V60L, S68N, T69K, D86E, K101A, I135R, K166R, K173A, Q174R, N175Y, Q197E, T200A, E203Q, Q207D, R211K, D218E, L228H I63L, K64I, K65Q, D76E, R78S, V106E, D110E, S191F 
MU050 MU050 Unknown Unknown D67G  M16K, V35T, C38*, T39D, S48T, V60I, K66E, D121H, K122E, K173T, D177E, I178L, T200A, Q207E, R211K, V245H I63H, S68Q, T69Y, S191F 
MU051 MU051 Unknown Unknown K219R  K20R, T27S, V35T, T39E, S48T, V60I, K103R, D121Y, K122E, S162A, K166R, K173A, Q197K, T200A, E204A, Q207E, R211S, L228X, G231X, E233G, K238X, W239X, P243X, V245E L205V, L210Q 
MU054 MU054 Unknown Unknown K219R  V8I, V35T, T39N, S48T, V60I, K122E, K166R, K173A, Q174K, D177E, T200A, E203G, E204G, Q207X, L210S, R211K, E224X, L234X, K238X, V245Q, L246V, P247X, E248K Q161E, L205V, P225R, P236T, T240I 
MU056 MU056 Unknown Unknown M184I G190R V35T, T39D, S48T, V60I, D121Y, K122E, K166R, R172K, K173A, D177E, Q197E, Q207G, R211K, W212R M16I, G18S, W24Q, M41I, G45R, G51R, R78K, W88Q, G99K, G112E, G141K, G152R, W153Q, G155R, S191F, W229Q, G231E 
MU057 MU057 Unknown Unknown K70R, M184V, K219Q A98G, V108I, Y181C, L234I K20R, K64H, I135V, Q174H, T200A, Q207E, R211K, F214L, H221Y, L228R L12S, L26S, S191F 
MU060 MU060 Unknown Unknown   V35T, E36A, T39D, E53D, V60I, T107S, D121Y, K122E, T139A, S162H, K173A, Q174K, T200A, Q207E, R211K, F214L, P226X, V245Q, E248X, D250E V254F, N255I 
MU061 MU061 Unknown Unknown   V35T, T39D, S48T, V60I, K166R, L168X, K173A, D177E, V189A, T200A, Q207K, L210*, G213X, K220X, P226X, F227I, E233D, K238X, P243A, P247A, E248A, D250G I178T, L193S, L234S, H235S, P236D, D237~, I244Y, V245~, L246~ 
MU062 MU062 Unknown Unknown T69G V179D D86E, F87L, K102R, V111I, D121Y, K122E, K173T, Q174K, D177E, T200A, Q207E, R211K I63E, W71R, R72G, K73N, L80V, N81K, K82E, F116C, S191F 
MU063 MU063 Unknown Unknown   S162C, T200A, Q207E, R211K, P243L, V245Q S191F 
MU064 MU064 Unknown Unknown   V35T, T39D, S48T, V60I, D121H, K122E, I135R, I142V, K166R, K173A, T200A, Q207E, R211K S191F 
MU065 MU065 Unknown Unknown K70R, M184V, K219E  V35T, T39D, S48T, V60I, K64R, W88C, D121H, K122E, S134G, I135R, Q145H, K166R, R172K, K173X, Q174X, D177E, I178L, Y181X, T200Q, E203Q, E204R, Q207E, R211X, T215X, H221X, L228X, W229X, E233D, H235X Q91H, V118F, F160S, Q182S, H198L, R199E, I202~, L205V, L210Q, D218T, K220P, Q222~, P226L 
MU068 MU068 Unknown Unknown T215H Y188H V35T, T39N, S48T, V60I, W88C, D121H, K122E, I135K, Q145H, K166R, I167X, E169Q, K173A, Q174R, D177X, G190X, L193X, Q197X, T200A, I202X, Q207R, R211K K126E, Q182H, E194R, E203~, L205S, L210~, F214Y 
MU069 MU069 Unknown Unknown   V35I, K102R, K104R, T107S, I135V, S162C, L210X, T215X, K219X, K223E, E224G, L228X, E233X, K238X P226H, W239S 
MU070 MU070 Unknown Unknown   V35T, E36A, T39D, V60I, D121Y, K122E, K173A, Q174K, D177E, I178M, T200A, R206*, Q207R, R211K L205~ 
MU072 MU072 Unknown Unknown K219R G190D V35T, T39D, V60I, D121H, K122E, I135V, A158X, K166R, K173A, D177E, V189A, I195T, R199*, T200S, I202T, Q207E, L210S, R211S, W212G, K223T, E224D, G231X, Y232X, K238X, T240X, Q242R, V245P, L246X, D250N, S251A M164T, L168S, I178T, L193S, H198Q, L205S, E233R 
MU074 MU074 Unknown Unknown   V118I, I135A, S162C, K173R, T200A, E204Q, R211K, K249N M164T, L168I 
MU075 MU075 Unknown Unknown  G190R K104R, K122E, D123N, K166R, K173A, D177E, G196R, T200A, I202V, Q207A, R211K, W212R, M230I W88Q, G93K, G112E, G141E, G155R, W229Q, G231E 
MU078 MU078 Unknown Unknown   V8I, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, K166R, K173T, D177E, E194K, T200A, Q207E, L210F, R211K, E224D, P225L, P236X, K238X, W239X, P243X, V245I, P247A I202N, E203R, P226N, M230D, Y232G, E233M, L234T, I244~, L246T 
MU079 MU079 Unknown Unknown  Y188D, G190R V35L, T39A, K102R, K104R, D123E, I135V, S162C, E194K H96R, Q182H, Y183N 
MU080 MU080 Unknown Unknown  A98G, Y188S P14S, V35T, T39A, S48T, E53D, V60I, D121H, K122E, D123H, I135V, T139S, N147Y, S162R, S163T, E169D, K173T, D177K, Y181X A33S, C38W, N81I, K82Q, L120F, I159L, M164W, I167S, Q182S 
MU081 MU081 Unknown Unknown D67G, K219Q K238T V35T, C38*, T39D, V60I, K66E, D121Y, K122E, K173T, D177E, T200A, E203D, L205F, Q207R, L210S, D218E, E224X, W239X, V245R, E248Q, K249N I63N, S68Q, T69Y, D76N, G99R, K126N, K220E, P226H, M230D, Y232S, E233T, L234T, P236S, P247~, W252L 
MU088 MU088 Unknown Unknown   S162C, D177E, V179I, T200A, I202V, Q207E, R211K, I244K P170Y, Y232K 
MU091 MU091 Unknown Unknown  G190R S3C, E6A, V8I, V35S, E36A, T39D, S48T, V60I, D121H, K122E, I135T, S162C, R199T, T200A, Q207E, L210S, R211K, T216P, D237E, K238Q Q182P, P226S, Y232I, E233N, L234F, T240N 
MU092 MU092 Unknown Unknown K70N, M184W, K219R Y181F V10L, V35T, T39D, S48T, V60I, V106L, K122E, D123N, T131P, I135V, I142T, Y144F, E169K, K173A, D177E, V179A, T200A, E203Q, E204K, Q207T, L210V, R211K, H221L, E224K, P225X D76Y, R78G, V118F, A129E, R143G, Y146F, F160S, Q182H, Y183I, D185N, H198L, R199I, I202~, T216H, P217R, D218T, M230W, L234S 
MU095 MU095 Unknown Unknown V75L  I2V, P9S, V10L, V35P, E36S, I37F, T39D, S48T, V60I, A98S, K101Q, K102Q, K104N S3G, G15R, K20M, K22Q, Q23P, P25Q, E29K, R72T, T84S, D86Y, E89K, G99R 
MU096 MU096 Unknown Unknown M41L, D67N, V75M, M184V, T215Y K103N, V108I V35T, T39D, S48T, V60I, V90I, I94L, T107S, V118I, K122E, D123N, E138D, Q145H, S162Y, K173A, D177E, Q197H, T200A, I202L, E203D, R206K, Q207E, L210V, R211K, H221X, L228P, L234X, P243S, V245R, P247Q, E248K, K249R E29D, R72I, K154I, L209S, K220N 
MU097 MU097 Unknown Unknown  K103N V35T, T39E, S48T, E53D, V60I, D121Y, K122E, S162H, K166R, K173A, T200A, Q207E, F214L, L228X, P243A, V245Q, P247Q, E248K, S251X, W252X, K259N G196W, T216N, P217T, G231R, T253E, V254C, N255H, V261L 
MU098 MU098 Unknown Unknown   V21I, V35T, T39D, S48T, V60I, K122E, D123N, K173A, Q174R, D177E, I178L, E194K, T200A, Q207X, L210X, R211K, G213X, F214I, K220X, E224X, P226X, K238X, P243A, V245Q, P247X, E248X, D250G, S251C P217R, M230D 
MU100 MU100 Unknown Unknown K219Q  V35T, E36A, T39D, S48T, V60I, K101R, D121H, K122E, E169K, K173T, P176Q, D177E, T200A, E204G, Q207E, R211Q, D218N, H221L, L234X, K238X, W239X, V241L, P243L, V245X, E248X, W252* Q91H, N147I, L210~, W212S, G231E 
MU101 MU101 Unknown Unknown V75L, M184V K101E, V106M V35K, E36A, T39D, V60I, V90I, D121Y, K122E, I132V, I167F, K173A, Q174R, D177E, T200A  
MU106 MU106 Unknown Unknown   V35T, T39D, V60I, K122E, I135L, K166R, K173I, Q174K, T200A, Q207H, R211K, L234X, T240X, V245Q, P247X R206G 
MU108 MU108 Unknown Unknown  Y181F, Y188H, P236L V8I, V35T, E36A, T39D, S48T, V60I, V106L, D121Y, K122E, K166R, K173T, P176Q, D177K, I178M, V179A, T200A, E203X, E204R, R206K, Q207R, L210S, R211N, F214I, T216*, H221Y, E224X, L228X, L234X, K238X, Q242X, I244L, V245T, P247X, E248K, T253X, I257T K13N, V111E, Y144S, Q161P, S162E, S163Y, I202~, L205I, W212~, K220N, P225~, M230D, G231R, Y232A, V254R, Q258T, K259T 
MU109 MU109 Unknown Unknown  V179D T27S, V35T, T39E, S48T, V60I, T107S, D121H, K122E, S162C, D177G, T200A, Q207E, R211K, E233D, L234X  
MU111 MU111 Unknown Unknown M41L, D67N, V75M V106M S3C, K20R, T39E, E44D, V60I, I135L V118F, T139P, Q145L, Y146F 
MU112 MU112 Unknown Unknown M184L, T215Y V179E V35T, T39E, S48T, V60I, D121H, K122E, K154E, F171L, K173A, Q174K, D177E, I180V, Q197E, T200E, E204K, Q207E, R211K, F214I, D218N, E224X, E233G, H235P, D237N, V241I, V245R R143G, W153R, M230V, Y232S 
MU116 MU116 Unknown Unknown   K32E, V35T, E36A, T39D, S48T, K49R, V60I, D121H, K122E, I135R, T165I, K173A, Q174R, D177E, I178L, V179A, T200A, I202V, R211K, K219X, E224X, P225X, E233D E204S, L205Q, Q207~ 
MU117 MU117 Unknown Unknown   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, K166R, K173A, T200A, Q207E, R211K, W212G, G231X, E233D, V245Q, E248X, N255X L234~, H235~, P236S, D237S, K238D, W239T 
MU123 MU123 Unknown Unknown   V35T, E36A, T39E, S48T, E53D, V60I, D121Y, K122E, K166R, K173A, Q174R, P176L, D177E, E194K, Q207I, R211K, E224D, D237N, V245K, E248N F124S, Q182H, L205Q, H208I, T216N, P217T, P226H, V254L 
MU124 MU124 Unknown Unknown   V35T, T39N, S48T, E53D, V60I, K102M, D121Y, K122E, S162H, K166R, E169A, K173D, Q174T, Q197K, T200A, Q207N, V245X, D250G, S251Q R172Q, Q182H, W252L 
MU125 MU125 Unknown Unknown D67G, T215~, K219Q  V35T, E36A, C38S, T39D, S48E, V60I, K66E, S68*, K166R, K173A, Q174R, T200A, E204R, Q207E, L210X, R211K, F214X I63N, T69Y, P217H, D218R 
MU126 MU126 Unknown Unknown   V35T, E36A, T39D, S48T, V60I, K122E, I135V, S162Y, M164L, K166R, E169K, R172G, K173L, E194G, T200A, I202L, R206K, Q207E, R211K, K223R, P225L, P236X, D237E, K238Q, P243A, V245S, E248K, S251T I37L, G152V, I195S, H198Q, R199I, L205Q, P217A, D218Y, H235D, W239P, L246C, P247~