Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Chew (2015)
Title Low prevalence of hepatitis C co-infection in recently HIV-infected minority men who have sex with men in Los Angeles: a cross-sectional study.
Citation BMC Infect Dis
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 51
NumPts 51
Subtype B


Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
11US_2106 11US_2106 Unknown Unknown   K20R, V106I, K122E, D123N, S162A, F171Y, D177E, T200A, F214L, S251N, A272P, K277R, I293V, E297A  
11US_2107 11US_2107 Unknown Unknown   S68G, A98S, K122Q, K166R, D177E, Q207K, R211K, V245E, E248D, K249R, A272P, I293V, Q334L, G335D  
11US_2110 11US_2110 Unknown Unknown M41L, T215C  V60I, K122E, I135V, E169D, Q174R, T200A, H208Y, R211K, L228F, T286A, E297Q P226S 
11US_2111 11US_2111 Unknown Unknown   K20R, S68G, T69N, K122E, S162C, Q174H, I178L, T200E, V245M, A272P, K277R, T286A, V314I, D324E, I329L, G333E, Q334H N137D 
11US_2112 11US_2112 Unknown Unknown  V179E V35T, V60I, R83K, D123N, R211K, A272S, L283I, I293V, G335S  
11US_2113 11US_2113 Unknown Unknown   V35I, K49R, S68G, E79D, K122E, D123A, I135T, E169D, D177E, I178L, T200A, E204K, Q207E, R211K, F214L, V245M, A272P, A288S, I329L, Q334R, G335D  
12US_2115 12US_2115 Unknown Unknown   E6D, K11R, A98S, I135T, T200I, R211K, I257L, A272P, K277R, I293V, D324E, Q334H S268R 
12US_2116 12US_2116 Unknown Unknown   D123E, I135T, I178M, R211K, K277R, T286A, I293V, P294S, Q334L  
12US_2117 12US_2117 Unknown Unknown   K20R, V35E, T39A, D123E, E138A, I142V, I178M, D192N, T200E, R211Q, S251A, I293V, K311R  
12US_2118 12US_2118 Unknown Unknown   D123E, I135V, D177E, T200M, R211T, F214L, I244V, V245M, A272P, E291D, Q334L  
12US_2119 12US_2119 Unknown Unknown   K122E, D123N, I135T, A272P, I293V, E297A, V317A  
12US_2124 12US_2124 Unknown Unknown   V8I, R83K, G196E, E248D, T286A, I329L, G335N  
12US_2125 12US_2125 Unknown Unknown   K122E, D123N, F214L, E248N, A272P, K277R, E291D, V292I, S322A, Q334L  
12US_2126 12US_2126 Unknown Unknown  V179E, Y181C K103R, D121Y, K122E, D123E, S162C, T165V, T200K, Q207E, R211K, V245L, A272P, K281R, T286A, I293V, V317A, Q334L  
12US_2127 12US_2127 Unknown Unknown   S48T, K102R, K122E, D123E, S162A, E169D, V179I, G196E, T200A, E204D, E248D, A272P, I293V, Q334L  
12US_2130 12US_2130 Unknown Unknown   V21I, V35I, E169D, G196E, I202V, E204K, R211K, V245Q, E248D, D250E, A272P, I293V, Q334E  
12US_2133 12US_2133 Unknown Unknown   E6D, D123E, S162C, Q174K, Q207E, L210F, R211K, A272P, K277R, K311R, G333E, Q334L  
12US_2134 12US_2134 Unknown Unknown   D123E, I142T, R172K, I178L, Q207N, R211K, R284K, I293V, V317A, I329L  
12US_2135 12US_2135 Unknown Unknown   K20R, K104R, K122E, D123T, D177E, T200TI, V245T, D250E, A272P, T286A, V292I, K311R, E312EK, H315LPQR, A327APST, E328K, G333DE, Q334KMRT G316GAEV, V317GRW, Y318YDHN, K323KN, D324KN 
12US_2136 12US_2136 Unknown Unknown   K11N, P14S, V35I, A98S, K102Q, K104R, E169D, Q207E, R211K, K277R, T286A, I293V, E297Q, S322T  
12US_2137 12US_2137 Unknown Unknown  K103N K122E, D123N, I142V, S162C, E169K, R211K, I244V, V245K, V292I, I293V, Q334E  
12US_2138 12US_2138 Unknown Unknown   E40D, K49R, I135T, M164I, K173Q, Q197R, V245K, P247A, D250E, A272P, T286A, E297K, I326V, Q334Y G213E 
12US_2139 12US_2139 Unknown Unknown   K32N, I50V, K122E, D123N, I135K, T200I, R211K, V245E, E248I, V317T, I329V, Q334E  
12US_2140 12US_2140 Unknown Unknown   K102R, K104R, K122E, D123S, I135T, S162Y, V179I, T200I, R211K, A272P, I293V, G333E, Q334N Q174*K, L303F 
12US_2141 12US_2141 Unknown Unknown   I50V, D123E, I135T, I142V, K166R, G196E, H208Y, R211K, V245M, A272P, V276I, T286A, K311R, Q334N  
12US_2144 12US_2144 Unknown Unknown   E36D, R83K, K122P, K173E, D177E, I178L, E204K, Q207E, P243S, V245K, A272P, K277R, T286A, E297R, L301I, G335D  
12US_2145 12US_2145 Unknown Unknown V75VI  V35T, K122P, I135T, V148G, I178M, A272S, K277R, L283I D76DN, E79K 
12US_2147 12US_2147 Unknown Unknown   D121Y, K122E, I135T, E138A, R211K, A272S, T286A, I293V, I326V, Q334L  
12US_2151 12US_2151 Unknown Unknown   V35T, K122E, D123E, T165I, D177E, I202V, R211K, V245I, D250E, K277R, K281R, A288S, I293V  
12US_2156 12US_2156 Unknown Unknown   P4S, I135T, I142V, S162F, T165I, R211K, A272S, K277R, T286A, V292I, I293V, P294T, D324E, I326V, Q334L  
12US_2157 12US_2157 Unknown Unknown   E44G, K64R, K173R, Q174K, E203D, R211E, V245T, D250E, A272P, K275Q, R284K, T286A, I293V, I309L, A327V, Q334L G45R 
12US_2159 12US_2159 Unknown Unknown   K104N, V106VI, K122E, R206RK, R211K, A272P, I326V, I329L  
12US_2162 12US_2162 Unknown Unknown   V35T, E53D, V60I, E138A, T165I, Q207R, R211K, F214L, D250E, A272P, T286A, I293V, I329L, G333E  
12US_2163 12US_2163 Unknown Unknown   N175H, G196E, R211K, F214L, V245E, I293V, K311R  
12US_2164 12US_2164 Unknown Unknown   A98S, K122E, D123S, I135T, E138A, G196E, I202V, R211REGK, Y271F, A272P, A288S, Q334QL  
12US_2165 12US_2165 Unknown Unknown   A98S, K122E, D123S, I135T, E138A, S162C, G196E, I202V, R211G, Y271F, A272P, A288S, Q334L  
12US_2169 12US_2169 Unknown Unknown  V179E D123G, D177E, G196E, A272P, V276I, K281R, T286A, V292I, E297K, K311R  
12US_2170 12US_2170 Unknown Unknown   K122E, I135R, K173R, Q174K, I178M, R211A, V245R, A272P, T286A, D324E S268G 
12US_2171 12US_2171 Unknown Unknown   K20R, T39A, I135T, S162C, R211K, F214L, V245E, K277R, T286A, A288S, E297A  
12US_2175 12US_2175 Unknown Unknown  V106M, V179D, F227L K20R, I135R, I142V, Q145V, S162N, T200A, R211K, V245E, A272S, K277R, I293V, L310I, V317A, I329V, Q332P, G335D  
12US_2176 12US_2176 Unknown Unknown   V35I, R83K, R211K, K281R, T286A, E291D, L301I, Q334E  
12US_2178 12US_2178 Unknown Unknown  K103N I178M, Q207K, A272P, K277R, V317A, S322T, Q334N  
12US_2179 12US_2179 Unknown Unknown   S162A, K173N, D177N, I202V, F214L, V245K, A272P, T286A, V292I, E328D, Q334N, G335D  
13US_2182 13US_2182 Unknown Unknown   K101Q, K102Q, K104R, I142V, R172K, K173N, Q174K, V179I, G196E, T200A, Q207E, R211K, F214L, A272P, V276I, L283I, P294T, P321A, D324E, Q334L  
13US_2183 13US_2183 Unknown Unknown   D121Y, K122E, S162C, Q197E, R211K, F214L, D250N, A272P, K277R, T286A, I293V, D324E, L325I, Q334R, G335D T216~ 
13US_2186 13US_2186 Unknown Unknown   K122E, I135M, P170S, T200A, I202V, Q207R, R211K, V245K, D250E, I293V, Q334E  
13US_2187 13US_2187 Unknown Unknown   I135T, S162C, Q174D, G196E, T200A, R211G, V245Q, E248D, K277R, T286A, A288S, V292I, P294T, Q334R, G335D  
13US_2188 13US_2188 Unknown Unknown   K11R, T39A, R83K, K122E, S162C, T200S, Q207K, R211A, V245I, A272P, K277R, L283I, I293V, P294S, E297K, G333E  
13US_2191 13US_2191 Unknown Unknown  V179E R83K, D86E, D123E, I142L, D177E, G196E, Q207E, V245M, S251I, A272P, A288S, S322T, Q334L  
13US_2192 13US_2192 Unknown Unknown   K11R, V35A, T39A, A98S, D123E, I142V, K166R, D177E, Q207D, R211K, F214L, K277R, L283I, I293V, E297K, S322T, I329V  
13US_2193 13US_2193 Unknown Unknown  K103N E6D, K11R, A98S, T200I, R211K, I257L, A272P, K277R, I293V, D324E