Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Wolf (2016)
Title Phylogenetic evidence of HIV-1 transmission between adult and adolescent men who have sex with men.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 2850
NumPts 1953
Subtype B, A, C, CRF01_AE, CRF02_AG, CRF11_cpx, D, F, CRF12_BF, CRF06_cpx


  Page 1 of 29    Next >   Last Page Jump to Page   
Back To Query

Page 1   listing Isolate 1 to Isolate 100 from Total 2850 Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
1007 1007 Unknown Unknown   K122E, I135T, E204D, R211K  
1014 1014_2 Unknown Unknown V75VL  K11KR, V35T, T69TA, E79D, K102Q, V118I, P170S, D177E, V179I, T200I, F214IL  
  1014 Unknown Unknown   K11KR, V35T, T69TA, E79ED, K102Q, V118I, P170S, D177E, V179I, T200I, F214L  
1029 1029 Unknown Unknown   I135T, S162C, D177DG, T200A, Q207E  
1039 1039 Unknown Unknown   S162C, K173E, T200TA, E204Q  
1062 1062 Unknown Unknown   R83K, I202V, R211RG  
1083 1083 Unknown Unknown   V35I, V118I, D123E, I135T, I202V, R211K, F214L, V245Q  
1135 1135 Unknown Unknown   V8I, T27S, I50V, V60I, R83K, I135V, S162C, R211K, V245M, D250E  
1208 1208 Unknown Unknown  K103N E6K, A98S, Q197E, R211K, L246X, E248N  
1247 1247 Unknown Unknown   V35M, T39A, R83K, E138EA, T200A, I202V, R211K, V245Q  
1289 1289 Unknown Unknown   P4H, K20R, D123E, I135V, S162C, R211K  
1295 1295 Unknown Unknown   V35AT, T39TA, T69S, K102Q, K104R, S162C, T200A, Q207E, R211K, I244V, V245L  
1303 1303 Unknown Unknown   K64KR, K103R, D123E, G196E, Q197K, Q207E, R211RK  
1311 1311 Unknown Unknown   V35VA, K49R, S162C, E204Q, R211RK  
1323 1323 Unknown Unknown   D123E, I135IT, R211K, D237E, V245K  
1361 1361 Unknown Unknown M184V K101E, G190A T200TA, R211K  
1373 1373_2 Unknown Unknown M184V  S68G, V90I, D123E, I135V, S162SN, V179I, R211K  
  1373 Unknown Unknown D67G, K70R, L74V, M184V, K219E L100I, K103N S68G, V90I, D123E, I135V, S162N, I178M, V179I, R211K, H221Y D192A 
1441 1441 Unknown Unknown   D123E, R211K, V245M  
1448 1448_2 Unknown Unknown   K22R, V60I, K122KE, I135L, S162C, T200V, R211RGS  
  1448 Unknown Unknown   K22R, V60I, T69TN, K122E, I135L, S162Y, T200V, R211G  
1475 1475 Unknown Unknown   E169D, R211K, V245M  
1502 1502 Unknown Unknown   K11Q, E53D, R83K, K122E, D123N, R211K, V245E  
1509 1509 Unknown Unknown   T200I, Q207A, R211K  
1512 1512 Unknown Unknown   R83K, T165I, L193F, Q207E, R211K  
1609 1609 Unknown Unknown L74V, M184V  K122E, R211K  
1610 1610 Unknown Unknown   K64KR, I135IT, A158S, K166R, K173E, Q207K, R211S  
1632 1632_3 Unknown Unknown   K101Q, K104R, D121C, K122E, S162C, P170S, D177E, V179I, Q207E, R211K  
  1632 Unknown Unknown M184V  K101Q, K104R, D121C, K122E, S162C, P170S, D177E, V179I, R206RK, Q207E, R211K  
1656 1656 Unknown Unknown   K122E, S162C, E169D  
1668 1668_3 Unknown Unknown M41L, D67N, T69D, K70R, M184V, T215E, K219Q  V35K, V60I, K122E, I135T, S162SN, Q174K, R211K  
  1668_4 Unknown Unknown M41L, D67N, T69D, K70R, M184V, L210W, T215E, K219Q  V35K, T39TA, V60I, K122E, I135T, S162D, Q174K, N175Y, T200TI, R211K, D218E  
  1668_2 Unknown Unknown M41L, D67N, T69D, K70R, M184V, L210W, T215E, K219Q K103N V35K, T39A, V60I, K122E, I135T, S162DN, Q174K, N175Y, T200I, R211K, D218E  
  1668 Unknown Unknown M41L, T215E  V35K, T39A, V60I, K64R, Q174K, T200TA, R211K  
1678 1678 Unknown Unknown A62V, V75I, F77L, F116Y, Q151M, M184V K103N, Y181C K20R, V35I, S68G, R83K, K122E, D123N, K166R, I202V, R211KT  
1680 1680 Unknown Unknown M41L, M184V, L210W, T215Y A98G K20R, K43Q, E44ED, V118I, T200TA, E203EK, Q207A, R211K  
1737 1737_2 Unknown Unknown M41L, M184V, L210W, T215Y V179D, Y188L S68G, K102Q, K103R, K122E, G196E, T200I, Q207A, R211K, F214L  
  1737 Unknown Unknown M41L, M184V, L210W, T215Y V179D, Y188L S3T, K43E, S68G, K102Q, K103R, K122E, G196E, T200I, Q207A, R211K, F214L, V245T  
1749 1749 Unknown Unknown   P4PHNT, I5V, V35I, S68G, T107S, K122E, D123N, I135T, E169D, G196E, H208Y, R211K  
1779 1779 Unknown Unknown M41L, L74V, M184MV, T215Y V106A, V179VD, P225H D123E, I142V, Q174QR, D177E, I202IV  
1801 1801_2 Unknown Unknown K70KR  K122E, D123N, D177E, T200TA, R211RK  
  1801 Unknown Unknown K70R, M184V K103N K64R, T69N, K122E, D123N, I135L, E169K, D177E, T200A  
  1801_3 Unknown Unknown   K102R, K122E, D123N, D177E, R211K, V245K  
1804 1804 Unknown Unknown D67N, K70R, K219Q G190A V60VI, E169D, G196K, T200TA, R211K  
  1804_3 Unknown Unknown D67DN, K70KR, K219KQ  E169D, G196K, T200TI, R211K  
  1804_2 Unknown Unknown   E169D, G196K, T200TI, R211K  
1832 1832 Unknown Unknown M41L, D67DN, M184MV, L210LW, T215Y Y181YC E36D, K43Q, V60VI, K102KR, V118VI, K122E, I135V, R211K  
  1832_2 Unknown Unknown M41L, D67N, L210W, T215Y, K219R V108I, Y181C E36D, K43Q, E44D, K102KR, V118I, K122E, I135V, I142V, R211K, H221Y, L228H  
1838 1838_2 Unknown Unknown   V35VI, D123E, I135T, R211K  
  1838 Unknown Unknown   V35I, T69A, D123E, I135T, T200A, R211K  
  1838_3 Unknown Unknown   D123E, I135T, R211K  
1855 1855_2 Unknown Unknown D67N, K70R, L74V, M184V, T215F, K219Q L100I, K103N, V108I E6D, E28Q, V35M, T39A, T69N, V90I, D121Y, K122E, I135T, D177E, I178IM, V179I, R211K, D218E  
  1855 Unknown Unknown M41ML, D67N, T69D, K70R, M184V, T215F, K219Q K103N, V108I E6D, V35M, T39A, E40ED, V90I, K102KR, D121H, K122E, I135T, D177E, V179I, R211K, D218E R72RK 
1883 1883_5 Unknown Unknown   K102R, K122E, I135A, K173T, T200I  
  1883_3 Unknown Unknown T215Y L100LIM, K103N, G190A K102R, I135T, K173N, T200I  
  1883_2 Unknown Unknown   K102R, I135V, K173N  
  1883_4 Unknown Unknown   K102R, I135V, K173N, T200TI, K249Q  
  1883 Unknown Unknown   K102R, I135V, K173N, T200TI, K249Q  
1891 1891 Unknown Unknown  K103N K102KN, K122KE, D123DEG, D177E, R211K  
1899 1899 Unknown Unknown   V60I, K122E, I135L, E169EA, N175H, R211RG, F214L D76DN 
197 197 Unknown Unknown   V35I, K49KR, I50V, R83K, K122E, D123E, I135T, A158AS, T165TI, I202V, R211K, I244V  
212 212 Unknown Unknown K65R, D67N, T69D, K219E  V90I, D123E, R211K  
  212_2 Unknown Unknown A62AV, K65R, D67DN, T69D, V75I, Y115YF, M184V, K219KE  S68SR, V90VI, K102KR, D123E, R211K  
217 217 Unknown Unknown  K103N V35T, K122E, D123E, I135T, S162C, I178L, T200K, Q207E W24G 
259 259 Unknown Unknown   K11S, S68G, V90I, D121H, K122E, I135T, D177EG, V179VI, Q207QK, R211K, V245Q  
282 282 Unknown Unknown   A98S, D123E, D177E  
302 302_2 Unknown Unknown K70R, T215Y V179E, Y181C K102Q, K103R, S105A, K122P, I178M, T200A, E203D, Q207N  
  302_3 Unknown Unknown M184V, T215Y V108I, V179D, Y181C V21VI, K102Q, K103R, S105A, V106VI, K122P, I178M, V189I, T200A, Q207N E203DN 
  302 Unknown Unknown  V179E K102Q, S105A, K122P, T200A, I202IV, E204ED, Q207DEKN, L210LF, R211RK  
326 326 Unknown Unknown D67N, M184V K103N G196E, Q207E  
393 393 Unknown Unknown   T39A, K122E, I135T, I142V, S162C, T200A, Q207E, R211K  
401 401_2 Unknown Unknown M184MV K103KN, Y188Y*FL I135IT, E203EK, R211RK  
  401 Unknown Unknown M184V  I142V, R211K  
419 419 Unknown Unknown   V245K  
42 42 Unknown Unknown L74V, Y115F, M184V V179D, G190A K49KR, K103R, K122KE, R211K R72RIL 
430 430 Unknown Unknown   D121H, K122E, D177E, T200A, R211K  
436 436_2 Unknown Unknown   E6D, V35M, R83K, K166KR, E169D, Q207K  
  436 Unknown Unknown M184MIV  E6D, V35I, R83K, V106VI, K166R, E169D, T200TA, I202IV, H208HY, R211RK  
  436_3 Unknown Unknown M184V  E6ED, V35IM, R83K, V90VI, K166R, E169D, Q207E, H208Y, R211K  
514 514 Unknown Unknown M41L, L74V, M184V, L210W, T215Y K103N, V108I K122P, I135T, D177E, T200R, Q207E, R211K  
515 515 Unknown Unknown   R83RK, D123E, I135V, E138A, S162C, R172RK, I178L, V179I, R211K  
522 522 Unknown Unknown  K103N E6D, V35MT, T39N, E40D, D177N, V179VA, T200A, R211K, I244IV, E248ED  
577 577 Unknown Unknown   V60I, S68G, K82R, K102Q  
596 596 Unknown Unknown   V21I, I135T, S162SN, I178M, Q207E  
609 609 Unknown Unknown   D86E, A98S, K101R, K173R, Q174E, D177N, R211K  
640 640 Unknown Unknown M184V K103N D123E, I178M, R211K  
664 664 Unknown Unknown   R211RK  
744 744 Unknown Unknown  K103N R211Q  
765 765 Unknown Unknown   S162C, Q207E  
  765_2 Unknown Unknown   S162C, Q207QE, V245EQ, E248EQ  
770 770 Unknown Unknown   E6D, D121Y, K122E, D123E, I135T, S162C, D177E, I195L, G196E, V245M, E248D  
794 794 Unknown Unknown   V60I, K122E, I135R, I142V, S162A, K173N, T200A, Q207E, R211K  
796 796 Unknown Unknown M41L  V35T, E36S, K49R, V60I, S162A, E169EG, K173T, Q174KR, D177E, I178IV, T200A, Q207E, R211K  
813 813 Unknown Unknown   S162C, T200AV, Q207H  
817 817 Unknown Unknown  K103KN K11KT, K101KR, K122E, S162C, I178M, I195L  
839 839 Unknown Unknown   K122E, D177E, I178IM, R211RK  
969 969 Unknown Unknown  G190A K11R, D123E, I142T, D177E, V179I, Q197E, Q207E, D237E  
977 977 Unknown Unknown   S68G, K102Q, K122P, G196E, Q197K, T200TI, Q207E  
986 986 Unknown Unknown   V35T, E36A, T39E, E40D, K122E, D123N, I135T, T165I, K173I, Q174K, T200A, Q207E, R211K, F214L  
  986_2 Unknown Unknown   V35T, T39E, E40D, K122E, D123N, I135T, E138A, K173IT, Q174K, T200A, Q207E, R211K, F214L, P243T, V245Q, D250E