Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Yamaguchi (2017)
Title HIV-2 surveillance with next-generation sequencing reveals mutations in a cytotoxic lymphocyte-restricted epitope involved in long-term nonprogression.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV2
SelectedType Clinical
NumIsolates 8
NumPts 8
Host Human

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
LA37 LA37 Unknown Unknown A62V  M11T, K43R, D86E, T107S, P126Q, A158T, H162Y, H228Q, T237N, K277R, R307K, E334D, E344G, V357I, N404D, A437V, V458I, I495V, S506V, S508G V5I, I10V, K176P, I251K, H317C, I348V, I365V, I397T, A426V, K463R, K467R, K468M, E523K 
LA38 LA38 Unknown Unknown M184V  D86E, P126Q, H162Y, K173R, R200K, I251V, E334D, E344G, V357I, E396D, A437S, V458I, K465R, K468V, E470G, I495V, S506V, S508G V2I, V5I, R22K, V167I, K176E, L270I, K358R, T360A, I365V, I397T, D432E, K463R, S515N, K516R, I531L 
LA39 LA39 Unknown Unknown Q151M, E219D  K28R, F214L, D218E, D224N, I251V, R307K, E334D, I341V, E344G, N404D, A437T, R448K, V458I, K465R, K468V, V493A, S506V, S508G, M525I, A534S, V559I I10V, P126K, V167I, K176P, L270I, V293I, I365V, I397T, D413E, G431K, K463R, I496V, Q558H 
LA40 LA40 Unknown Unknown   M11T, K43R, P126Q, V135T, I180L, H228Q, R307K, E334D, E344G, E396D, V458I, K468V, S506V, S508G, E524D V5I, V167I, K176P, Y227F, L270I, H317C, I365V, I397T, G431K, K463R, K467R, Q476K, L486V, T487A 
LA41 LA41 Unknown Unknown S215F  K40R, K82R, V111I, P126Q, H162Y, K176Q, R200K, I251V, E334D, E344G, V357I, N404D, P435L, V458I, K465R, K468V, V493A, S506V, S508G, A534S V167I, A267V, L270I, Q330L, I365V, I397T, G431K, K463R, K516R 
LA42 LA42 Unknown Unknown   M11T, K20R, K64R, P126Q, H162Y, D218E, H228Q, K249R, I251V, R307K, E334D, I341V, E344G, V357I, N404D, V458I, K468V, S506V, S508G, Q520K V5I, I10V, I63M, K176P, L270I, V293I, I365V, I397T, D413E, G431K, K467R, L486V 
LA43 LA43 Unknown Unknown  I181V M11E, K20R, L21I, T27S, K102E, T107S, E122P, D123N, P126Q, A138S, H162Y, E169D, G211N, L212M, D218E, H228Q, I251V, Y271F, L279I, R307K, S311E, H317S, E322G, E324P, E334A, E344G, K347R, V357I, R385E, E399D, N404D, V423I, I434L, P435E, F440Y, K468V, K492Q, N519A, Q520K, I542L K4R, I8V, I10V, E32L, P51S, I90V, H121D, V135I, T163S, Q166K, K176N, T194S, L203S, Y227F, T237K, Q248E, A267T, R281K, E304Q, Q320K, K323I, D332N, Q333L, E345D, I365V, Q370H, K388V, I397T, D403T, D413E, F427Y, G431K, A437K, Q449T, K463R, M484L, T487Q, S506I, A507T, S508A, S513T, K516P, I517L, A534G 
LA44 LA44 Unknown Unknown  I181V L21I, T27S, K66R, K102E, E122P, P126Q, H162Y, E169D, I179T, D192N, G211D, L212M, F214L, D218E, H228K, L246I, I251V, Y271F, K277R, L279I, R307K, S311E, H317S, E322G, E324P, E334A, E344G, V357I, R385E, E399D, N404D, V417I, I434L, P435E, G436K, A437V, F440Y, Q449A, K465R, K468V, K492Q, S508G, Q520K, K540R, I542L V5I, I8V, I10V, M11K, E32L, I90V, I118V, H121D, T163S, R165G, Q166K, V167I, K176D, T194S, E207Q, Y227F, T237K, Q248E, A268S, E304Q, Q320R, K323V, D332N, Q333L, E345D, I365V, Q370H, K388M, I397T, D403T, D413E, F427Y, G431K, M484L, T487Q, S506I, S513T, K516P, A534G