Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Moskaleychik (2015)
Title Rapid spread of the HIV1 circular recombinant CRF02AG in Russia and neighboring countries.
Citation Vopr Virusol
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 14
NumPts 14
Subtype A, A + CRF02_AG, B

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
MSK_SK_001 MSK_SK_001 None None A62V  K11T, V35I, E36D, T39K, T69S, D123N, A158S, K173V, Q174K, D177E, Q207A, R211S, V245T, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, I326V, Q334L, G335D, R356K, M357K, R358G, G359S  
MSK_SK_002 MSK_SK_002 None None   K11T, V35T, E36D, T39D, A158S, K173S, Q174K, Q207A, R211S, V245K, E248D, A272P, T286A, E291D, V292I, I293V, P294T, K311R, R356K, M357K, R358G, G359S  
MSK_SK_003 MSK_SK_003 None None   E6D, V35T, T39M, K122E, D123S, S162C, K173L, Q174K, D177E, T200I, E203D, Q207A, R211S, V245T, E248D, A272P, T286A, E291D, V292I, I293V, P294T, K311R, D324E, G335D, R356K, M357K, R358G, G359S K277MR 
MSK_SK_005 MSK_SK_005 None None   P14K, V35T, E36D, K102Q, D121Y, K122E, I135V, S162A, K173V, Q174K, D177E, T200A, Q207A, R211K, V245Q, E248D, K277R, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357K, G359S, K366R, I375V, K395R, E399D, T403M, E432D, V435A, L452I, Q464H, V467I, D471E, Q480H, L491P, K512R, S519N, Q524K, K527G, E529D, A534S, A554S  
MSK_SK_006 MSK_SK_006 None None   K11T, V35I, E36D, T39K, K43Q, V60I, D121H, K122E, D123S, A158S, K173S, D177E, Q207A, R211S, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, I326V, G335D, R356K, M357K, R358G, G359S, E370A, A371V, I375V, K390R, T403M, V435L, L452I, S468P, D471E, Q480H, L491S, K512R, L517I, S519N, Q520K, Q524K, K527E, K530R, A534S, A554N, K558R A62C, E516KR 
MSK_SK_007 MSK_SK_007 None None A62V  K11T, V35I, E36D, T39K, K122E, D123S, A158S, K173L, Q174K, D177E, Q207A, R211S, V245M, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, I326V, G335E, R356K, M357K, R358G, G359S, E370A, A371V, I375V, V381I, K390R, T403M, L452I, S468P, D471E, Q480H, L491S, K512R, L517I, S519N, Q520K, Q524K, K527E, K530R, A534S, A554HQ, K558R  
MSK_SK_009 MSK_SK_009 None None   V35T, E36D, T39K, K122E, D123S, A158S, K166R, K173L, Q174K, D177E, Q207A, R211S, V245M, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, I326V, G335D, F346C, R356K, M357R, R358G, G359S  
MSK_SK_010 MSK_SK_010 None None   P14E, V35A, K102R, S162A, K173S, Q174K, D177E, Q207A, R211K, V245Q, E248D, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D, R356K, M357K, G359S  
MSK_SK_013 MSK_SK_013 None None   V106I, V118I, K122E, D123N, I135T, S162C, K166R, V179I, T200A, R211K, F214L, E224D, V245K, A272P, V276I, M357V  
PRM_045 PRM_045 None None   K11T, V35K, E36D, S68N, K122E, D123N, S162C, K173L, Q174K, D177E, Q207A, R211N, V245M, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, V317A, I326V  
PRM_047 PRM_047 None None   K11T, V35I, E36D, T39K, S68N, K122E, D123S, K173L, Q174K, D177E, Q207T, R211S, V245M, E248D, A272P, T286A, E291D, V292I, I293V, P294T, V317A, I326V  
PRM_049 PRM_049 None None   K11T, V35T, E36D, T39N, D121H, K122E, D123N, S162G, K173S, D177E, I178L, T200A, Q207A, R211S, V245T, E248D, A272P, K277R, T286A, E291D, V292I, I293V, P294T, V317A, I326V  
PRM_051 PRM_051 None None   K11T, V35I, E36D, T39N, S68N, K102R, K122E, D123N, A158S, K173S, Q174K, D177E, Q207A, R211S, V245M, E248D, A272P, T286A, E291D, V292I, I293V, P294T, V317A, I326V, E328D  
PRM_068 PRM_068 None None A62V  K11T, V35I, E36D, T39K, K122E, D123N, A158S, K173L, Q174K, D177E, Q207A, R211S, V245M, E248D, A272P, K277R, T286A, V292I, I293V, P294T, I326V, G335E, R356K, M357K, R358G, G359S  

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