Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Kityo (2017)
Title HIV drug resistance mutations in non-B subtypes after prolonged virological failure on NNRTI-based first-line regimens in sub-Saharan Africa.
Citation JAIDS
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 787
NumPts 787
Subtype A, C, D, B, CRF10_CD, CRF45_cpx, C + D, G, CRF06_cpx


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Page 1   listing Isolate 1 to Isolate 100 from Total 787 Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
28364 28364 NRTI NNRTI D67N, K70R, M184V, T215F, K219E Y181C K13*, V35T, T39N, D123N, K173S, Q174K, I178L, V179I, T200A, I202V, Q207A, R211K, D218E, L228H, V245Q, E248D, K281R, R284K, T286A, E291D, V292I, I293V, P294T  
28593 28593 NRTI NNRTI M41L, D67N, K70R, M184V, T215Y, K219E Y181C K20R, K32E, V35T, E36A, T39E, V90I, K101R, S117A, K122A, I135T, K173V, D177E, V179VI, T200AE, I202IV, E203K, Q207E, H208Y, D218E, L228LH, Q242K, V245Q, E248D, D250E, A272P, K275KR, E291D, V292I, I293V E44Y 
28642 28642 NRTI NNRTI M41ML, V75VA, M184V, L210LW, T215F V106M, F227L V35T, E36A, T39E, T69A, L109LI, K122E, D123N, I132L, K173T, Q174K, T200A, I202V, Q207E, R211K, F214FL, V245Q, A272P, K275R, Q278N, E291D, V292I, I293V L12LI 
66030 66030 NRTI NNRTI   V60I, K122E, D123N, D177E, I178M, G196E, T200L, Q207E, R211K  
66078 66078 NRTI NNRTI M184V, T215F K103N V90I, K102R, I135T, S163T, K173A, Q174K, D177E, T200I, Q207D, R211K  
66086 66086 NRTI NNRTI D67DN, K70KR, M184V, T215FY A98AG, Y181CFGV V60VI, K122E, D123NS, I135T, I142IV, K173AS, Q174QK, V179I, I202V, Q207A, R211K, H221Y D237V 
66088 66088 NRTI NNRTI D67DE, K70R, M184V, T215F, K219Q Y181C, M230L K46Q, T69N, K122E, K173S, Q174K, D177E, V179I, G196E, Q197R, T200A, Q207A, L228R  
82885 82885 NRTI NNRTI M41L, K65R, K70R, V75I, Q151M, K219Q K103KN, V106VM, Y181C, G190GA S68G, K122E, D123S, I142M, S162C, R172RK, K173A, Q174K, D177E, I178L, T200A, Q207E, R211K, F214L, H221Y, L228R  
82891 82891 NRTI NNRTI V75T K101E, G190A S48T, K122E, D123G, E138A, I142V, S162A, F171Y, K173A, Q174R, T200A, Q207E, R211K, F214L P52PL 
82900 82900 NRTI NNRTI M184V, T215Y V108I, Y181C S48T, S68G, K122E, D123S, I142IV, K173A, D177E, T200A, Q207E, R211K, H221Y  
82911 82911 NRTI NNRTI K65R, Y115F, M184V K101KE, K103KN, Y181C, G190GA S48T, V60VI, D121H, K122E, I142V, K173S, Q174K, D177E, I178L, V179T, T200A, Q207A  
82916 82916 NRTI NNRTI M184V, T215F A98G, G190A V60I, S68G, K122E, D123S, I135T, K173S, Q174K, D177E, V179I, T200A, I202V, Q207DG  
82919 82919 NRTI NNRTI M41ML, V75I, M184V, T215Y V106A K49R, V90I, K122E, I132L, D177E, I178L, T200R, Q207E, R211K P236H 
82959 82959 NRTI NNRTI M41L, L74V, M184V, L210W, T215Y A98G, K103N, K238T E44ED, V60I, V118I, D121H, K122E, I135L, I142V, S162N, D177E, I178IL, G196GE, T200A, E203EK, Q207E, R211K P52PL 
82970 82970 NRTI NNRTI M184V K103N V60I, I135T, V189VI, T200S, I202V, Q207A, R211S G45GR 
82980 82980 NRTI NNRTI D67N, K70R, M184V, T215F, K219E Y188L, P236PL V60I, K122P, K166R, D177EG, I178M, T200I, Q207E, R211K, P225PL G45GR 
82984 82984 NRTI NNRTI K70R, M184V G190A V60I, D121Y, K122E, D123G, I135IT, K173S, Q174K, D177E, I178L, V179I, T200A, E203EK, Q207A, R211N  
83003 83003 NRTI NNRTI D67G, V75I, M184V, T215Y Y181C K49R, V60I, S68G, K122E, D123S, I132L, I135T, S162D, E169D, K173R, Q174K, D177E, I178L, V179I, T200A, Q207A, R211S, K223KE, L228LR  
83006 83006 NRTI NNRTI M41L, D67N, K70KR, M184V, L210W, T215Y, K219KN A98G, K103N, K238T V60I, K101Q, K122E, D123N, I142V, K173LS, Q174K, D177E, V179I, T200A, I202V, Q207A  
83010 83010 NRTI NNRTI M41L, M184V, T215Y A98AG, K103N E44D, K49R, P55PS, V60I, I94L, K122E, I135T, S163ST, K173L, Q174K, D177E, T200K, Q207A, R211S, L228R  
83013 83013 NRTI NNRTI D67N, V75M, M184V, L210W, T215Y, K219KN V108I, Y181C K43N, V60I, V118I, K122E, D123N, I135T, S162Y, K166R, K173L, Q174K, D177E, V179I, Q207A, R211NS, K223Q, L228H  
83041 83041 NRTI NNRTI M41L, L74LI, V75A, M184V, L210W, T215Y A98G, K103N K43Q, E44D, K49R, I94L, K102R, V118VI, I135L, D177E, I178IM, G196GE, Q207E, R211K, L228H  
83043 83043 NRTI NNRTI M41L, D67DN, M184V, L210W, T215Y K103S, G190A V60I, K122E, D123N, I135T, K173S, Q174K, D177E, V179I, T200A, I202IV, E203D, Q207A, R211N  
83053 83053 NRTI NNRTI M41L, L74I, M184V, L210W, T215Y K101E, G190A E44D, V60I, K122E, D123N, I135R, D177E, I178M, T200I, E203K, Q207DE, R211K, K223KE  
83056 83056 NRTI NNRTI M41L, M184V, L210W, T215Y A98G, K103N, P225H S48T, V60I, K122E, D177E, I178M, T200A, Q207R, R211E, L228LR  
83058 83058 NRTI NNRTI M184V, T215F K101E, V108VI, G190A K43KQ, K49R, V60I, S68SG, K122V, D123N, I135T, E169D, K173R, Q174K, D177E, I178L, V179I, T200A, E203D, Q207A, R211S, F214L  
83069 83069 NRTI NNRTI D67G, K70R, M184V, T215F, K219E V108VI, Y181C S68G, K122E, I135T, I142V, K173T, D177E, T200A, I202V, F214L, H221Y, E224N  
83096 83096 NRTI NNRTI M41ML, K65KR, V75I, F77L, Y115YF, F116Y, Q151M, M184V Y188L S48T, S68SG, T69TI, V118VI, K122E, D123N, K173A, Q174R, D177E, G196E, T200A, Q207E, R211K, F214L  
83104 83104 NRTI NNRTI M41L, M184V, L210W, T215Y A98G, G190A K43E, E44D, K173S, Q174K, D177E, V179I, T200A, I202V, E203EQ, Q207D, R211K  
83106 83106 NRTI NNRTI M184V A98G, Y181C K49R, V60I, D121H, K122E, I135T, S162SC, K173S, Q174K, D177E, I178MV, V179VI, T200A, Q207A, R211S, H221HY  
83115 83115 NRTI NNRTI M184V, T215Y Y181C S48T, K101Q, K122E, D123S, I135T, T139M, K173A, D177E, T200A, Q207E, R211K  
83124 83124 NRTI NNRTI M184IV V108I, Y181C S48T, V90VI, K122E, D123G, T165IM, K173A, Q174K, V179VI, I195L, T200A, Q207A, R211K, F214L, H221Y  
83154 83154 NRTI NNRTI   K49R, V60I, K122E, D123E, E169D, D177E, I178IM, T200I, Q207EG, R211K  
83165 83165 NRTI NNRTI M41L, D67G, K70R, L74I, M184V, T215F, K219Q Y181C, G190A V60I, T69N, T107A, L109I, K122E, I135T, K173L, Q174K, D177E, I202V, Q207A, R211S, E233EG L228CR, Y232YD 
83166 83166 NRTI NNRTI  K103N, V108VI, P225PH K102KR, K122E, D123N, T165I, K173S, Q174R, D177E, V179I, T200A, I202V, Q207A, R211K, H221HY  
83172 83172 NRTI NNRTI   V60I, K64R, D121Y, K122E, I135T, K173S, Q174K, D177E, V179I, Q207A, R211N  
83178 83178 NRTI NNRTI M41ML, M184V, L210LW, T215FY A98AG, K103N K49KR, V60I, K82KR, L109LI, K122E, D123S, I135IL, K173L, Q174K, D177E, V179VI, T200A, Q207A, R211NS  
83180 83180 NRTI NNRTI D67N, K70R, M184V, T215F, K219Q V106A, F227L K43R, A98AS, L109LI, V118I, K122E, D123S, I135T, K166R, K173A, Q174K, D177E, V179I, I202V, Q207A, R211S, F214L  
83183 83183 NRTI NNRTI M41L, M184V, L210W, T215Y Y181C K43Q, V60I, D121Y, K122E, I135T, S162A, D177E, I178IM, G196GE, T200MR, E203EK, Q207E, R211K, H221Y, K238R V111VIM 
83185 83185 NRTI NNRTI D67N, T69D, K70R, M184V, T215F, K219Q A98G, K103N V60I, K122E, D123DN, I135L, E138G, S162C, K173A, Q174K, D177E, I178L, I202IV, Q207A, R211RK, L228HQR  
83186 83186 NRTI NNRTI D67DE, M184V, L210W, T215Y A98G, Y181C K43E, K49R, V60I, T69S, D121Y, K122E, I135L, D177E, I178IM, V179VI, T200K, Q207E, R211K, H221Y, L228LH  
83189 83189 NRTI NNRTI D67N, K70R, M184V, T215I, K219Q A98AG, K101PQ, K103NS, P225H V60I, T69N, K173L, V179I, I202V, Q207A, R211K  
83192 83192 NRTI NNRTI  K101P, K103N, P225PH S48T, K49R, V60I, K122E, D123DG, S162SC, D177E, I178IM, Q207E, R211K  
83195 83195 NRTI NNRTI M184V, L210W, T215Y G190A V60I, S68SG, A98AS, K122E, D123DG, I135T, E138Q, K173S, Q174K, D177E, V179I, T200S, I202IV, Q207A, R211NS, F214L  
83201 83201 NRTI NNRTI A62AV, K65R, M184V Y181CFIS, Y188YFHL K46KQ, S68G, K122KE, D123NS, I135IM, K173S, Q174K, D177E, V179I, I202V, Q207A, R211K  
83206 83206 NRTI NNRTI D67N, M184V, T215Y, K219N V108VI, Y181C E44D, S48T, V118I, K122E, I135R, A158S, K173A, Q174K, N175Y, D177E, V179I, T200A, I202V, E203K, Q207E, L210S, R211K, D218E  
83231 83231 NRTI NNRTI M41L, M184V, L210W, T215Y  K43E, E44D, K122E, D123N, I135T, I142V, K173S, D177E, I202V, Q207A, R211S P52PL, P59PS 
83240 83240 NRTI NNRTI M184V K103KNRS, V106VAMT, F227L S48T, K102Q, K104KR, K122E, D123N, I135IL, K173T, Q174K, T200A, Q207E, R211K, F214L  
83254 83254 NRTI NNRTI D67N, K70R, M184V, T215F, K219E Y181C K49R, V60I, D121Y, K122E, I135V, T139A, D177E, I178M, Q207E, R211K, D218E  
83263 83263 NRTI NNRTI A62V, D67K K101KE, Y181C K49R, K66E, S68G, W88WS, D121HY, K122E, Q174QR, D177E, I178M, V179I, E203K, Q207E, K219G T69F 
83273 83273 NRTI NNRTI M41L, M184MV, L210LW, T215NY K103N, V108VI K43KE, E44EA, V60I, V90VI, K122E, D123S, I135T, S162HY, K173S, Q174K, D177E, T200A, Q207E, R211RK  
83292 83292 NRTI NNRTI M41L, D67ST, T69G, K70R, V75I, M184V, T215F, K219E A98G, V108VI, Y181C V60I, D121H, K122E, I132L, I142V, K173KQ, D177E, T200A, E204Q, Q207A, R211S, D218E  
83301 83301 NRTI NNRTI M41L, M184V, L210W, T215Y Y181C K49R, V60I, V111I, K122E, I135T, T139R, K173S, Q174K, D177E, V179I, Q207E, R211K, H221Y E203EDKN 
83310 83310 NRTI NNRTI K65R, M184V K103N, Y188L K46Q, V60I, S68G, K122E, D123N, I135L, T139TA, I142IV, K173S, D177E, V179I, T200TA, I202V, Q207A, R211K  
83314 83314 NRTI NNRTI M184V K101E, Y181C, G190A S48T, K122E, D123S, K166R, K173I, Q174K, D177E, I178V, T200A, Q207E, L228R  
83321 83321 NRTI NNRTI M41L, L74I, V75VAIT, M184V, L210W, T215Y A98G, V108I, Y181C E44ED, S48T, S68SG, V118I, D121H, K122E, S162DN, K173AT, Q174K, N175Y, D177E, G196GE, T200E, I202IV, E203EK, Q207E, R211K, H221Y  
83327 83327 NRTI NNRTI D67N, M184I, T215Y A98G, K101KE, V108VI, Y181C, F227L E44D, S48T, V90I, K122E, D123DN, I135T, S162Y, T165I, K173A, D177E, T200K, I202V, E203K, Q207E, H208HY, R211K, K223E  
83337 83337 NRTI NNRTI M184V K103N, Y181C S48T, K122E, D123S, I135T, T139I, K173T, Q174K, G196E, T200A, Q207E, R211K, F214L, H221Y  
83347 83347 NRTI NNRTI D67N, T69TADN, K70R, M184V, K219Q K103N, Y181C S48T, V60I, K122E, D123N, I135T, K173A, D177E, T200A, Q207QK, R211K, D218E, L228H  
83384 83384 NRTI NNRTI M41ML, M184V, T215TNSY K103N, V108I E44ED, K122E, D123S, I135T, K173T, Q174K, D177E, I178L, T200A, E203ED, Q207A, R211K, K223KQ, L228LH  
83388 83388 NRTI NNRTI A62V, K70R, V75T, M184V, K219Q V106M, Y181C K64H, T69N, I135R, T165I, K173A, Q174R, D177E, V179I, T200A, I202V, Q207E, R211K, F214L, D218DE, L228R  
83391 83391 NRTI NNRTI D67G, K70R, M184V, K219Q V108I, Y181C V60I, S68G, K122E, D123S, T139R, S162SN, K173A, D177E, Q197P, T200A, R211K, H221Y  
83392 83392 NRTI NNRTI M41L, V75I, M184V, T215Y K103N, V106M S48T, V60I, K102R, K122E, I132L, I135IT, K173A, D177G, T200A, Q207E, R211K  
83409 83409 NRTI NNRTI L74V, M184V, L210W, T215Y A98AG, V108I, G190A, M230L K43E, E44D, V60I, V118I, D121H, K122E, I142MV, D177E, I178M, V189VI, Q207E, R211K, L228H  
83416 83416 NRTI NNRTI K65R, Y115F, M184V, K219E Y181C, G190A V60I, S68K, V106VI, D123E, E169D, D177E, I178V, V179I, T200M, I202V, Q207E, R211K  
83418 83418 NRTI NNRTI M41L, D67N, V75M, M184V, L210W, T215Y, K219N V106A, G190A, K238T E44ED, V60I, L109LI, V118I, K122E, D123N, I135T, E138A, S162SN, K173A, Q174K, V179I, I202V, Q207A, R211NS  
83438 83438 NRTI NNRTI K65R, V75M, M184V Y181C S68N, V90I, D121H, K122E, S162A, D177N, I178M, V179I, T200M, E203D, Q207E, R211K, H221L  
83439 83439 NRTI NNRTI M41L, M184V, T215F K103N K49R, V60I, V90I, A98AS, D121Y, K122E, A158S, S162H, D177E, I178M, T200TIM, Q207E, R211K, K238R  
83451 83451 NRTI NNRTI M41L, M184V, L210W, T215Y Y188L K49R, V60I, K102KE, K104N, K122E, I135V, T139TA, S162A, D177EG, I178M, T200L, Q207E, R211K, D218DE, D237N  
83460 83460 NRTI NNRTI K70R, M184V, K219E K101HN, K103HN, V108VAIT, Y181C, G190A K49KR, V60I, K122E, D123E, K173A, Q174K, D177E, T200A, I202V, Q207A, R211S, L228R D110DE, V111VG, Y115YN 
83461 83461 NRTI NNRTI K70KR, M184V, T215TS A98G, G190A T69TS, K122E, D123NS, I135IT, S162SCNY, K173S, Q174K, D177E, V179T, T200A, Q207D  
83463 83463 NRTI NNRTI   K122E, D123S, I142V, T165TI, K173LS, D177E, V179I, E194ED, T200A, I202V, Q207A, R211S  
83464 83464 NRTI NNRTI M41L, V75M, M184V, L210LW, T215Y K103N V60I, T69S, K122E, D123N, I135L, I142V, K173A, T200A, I202V, Q207A  
83478 83478 NRTI NNRTI M41L, D67N, T69D, M184V, L210W, T215Y A98G, Y181C E44D, V60I, V118I, D121C, K122E, I135R, D177E, G196E, T200A, I202V, E203K, Q207E, H208Y, R211K, K223EQ, L228H  
83479 83479 NRTI NNRTI M41L, L74V, M184V, L210W, T215Y K101P, G190A E44D, V118I, K122E, D123N, I142V, D177E, V179I, V189VI, Q207E, H208Y, R211RK, L228H  
83482 83482 NRTI NNRTI M41L, D67DN, K70R, L74LI, V75M, M184V, T215F, K219Q K101E, Y188L K49E, V60I, T69N, K122E, D123S, I135T, I142K, S162Y, K173S, Q174K, D177E, I178IF, V179I, T200I, Q207A, R211S, F214FL, K223KQ, E224D, L228LH, K238R  
83485 83485 NRTI NNRTI K65R, Y115YF, M184V L100I, K103N, Y181C K49R, K122KE, K173A, Q174K, D177E, T200I, Q207E, R211K, L228H S68SDGN 
83488 83488 NRTI NNRTI M41L, D67N, M184V, L210W, T215Y A98G, K103N, Y181C, G190A E44ED, V60I, K122E, D123N, I135T, T139R, I167IV, K173A, Q174K, D177E, G196GE, T200E, E203K, Q207E, R211RK  
83496 83496 NRTI NNRTI M184V, T215F K103N S48T, K101Q, V118VI, K122E, D123N, I135T, E138EQ, I142V, K173S, Q174K, D177E, T200A, I202V, Q207K, R211S F214M 
83498 83498 NRTI NNRTI M41L, M184V, L210W, T215Y A98G, K103N, V108I L109LI, K122E, D123N, I135T, K173T, Q174K, N175Y, G196E, T200A, Q207E, R211K  
83500 83500 NRTI NNRTI K65R, K70T, M184V Y181C V60I, S68G, I135T, K173S, D177E, V179I, T200V, I202V, Q207A, R211K, H221Y, P225PL  
83508 83508 NRTI NNRTI M41ML, M184V, T215F V108I, Y181C S48T, K122E, D123N, S162C, K173A, D177E, T200A, Q207A, H221Y  
83512 83512 NRTI NNRTI M41L, D67N, K70R, V75M, M184V, L210W, T215Y K101E, V106A, F227L K43E, V60I, A98S, L109I, V111I, V118I, K122E, D123N, E138A, K173S, V179VI, T200A, I202V, Q207A, H208Y, R211K, H221Y V189VM 
83517 83517 NRTI NNRTI M41L, D67N, V75M, M184V, L210W, T215Y, K219KN V108I, Y181C E44D, V60I, T107S, V118I, K122E, D123S, I135T, I142V, K173S, Q174K, D177E, V179I, T200A, Q207A, R211NS, D218E, H221Y  
83520 83520 NRTI NNRTI D67N, K70R, M184V, T215F, K219Q K101E, G190A K49R, V60I, T69N, E138A, S162D, E169K, K173E, V179I, T200I, Q207G, R211K  
83522 83522 NRTI NNRTI K70KR, M184V K103N V90VI, K122E, D123N, I135T, S162SG, K173A, Q174K, D177E, V179I, I202V, Q207E  
83531 83531 NRTI NNRTI D67T, K70R, M184V, T215F, K219E V108I, Y181C, G190A S48T, T69N, K122E, D123N, K166R, K173I, Q174R, D177N, T200A, Q207E, R211K, F214L, L228H  
83533 83533 NRTI NNRTI K70E, V75M, M184V, T215I Y188C, M230L V60I, A98S, V106I, V118I, D121H, K122E, R125K, I135T, I142V, D177E, T200L, Q207E, R211K, F214L, E224D, L228R  
83536 83536 NRTI NNRTI M184V, T215F K103N, Y181C K122E, D123S, T139M, K173T, D177E, T200A, Q207E, R211K  
83538 83538 NRTI NNRTI D67N, K70R, M184V, K219Q A98G, K103S, K238T V60I, K122E, D123NS, I135T, K173S, Q174K, D177E, V179I, Q207A, R211S, F214L, L228H  
83542 83542 NRTI NNRTI M184V Y181C K49R, I50V, V60I, K82KR, K122E, D123DGNS, I135T, T165L, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S  
83548 83548 NRTI NNRTI L74I, M184V A98G, G190E, P236PL V60I, K122E, D123S, I135T, E138A, K173S, Q174K, I178L, T200TA, Q207E, R211S, F214L, L228H  
83555 83555 NRTI NNRTI M184V K103N, P225H, K238T V60I, D121H, K122E, I135T, K173I, Q174K, V179I, I202V, Q207A, R211S  
83556 83556 NRTI NNRTI M41L, D67N, K70R, V75M, M184V, T215F, K219Q V106A, F227L V60I, I94L, K101Q, L109I, K122E, D123S, I135T, K173S, Q174K, V179I, G196GE, T200A, I202V, Q207A, R211K, H221Y  
83559 83559 NRTI NNRTI M41L, D67N, K70KR, M184V, L210W, T215Y K103N K49R, V60I, I135IT, D177E, I178M, G196E, T200I, Q207E, R211K  
83576 83576 NRTI NNRTI K70R, M184V, K219Q V108I, Y181C S48T, V60I, K64H, T69N, V90I, K122KE, I135T, S162Y, K166KR, K173A, Q174K, D177E, T200A, E203K, Q207E, R211K, F214L, H221Y, L228H  
83580 83580 NRTI NNRTI M41L, A62V, D67N, T69DN, L74V, V75T, M184V, L210W, T215Y V108I, Y181C E44D, K49R, K64KR, V90I, V118I, K122E, D123DN, I142V, S162D, K173A, Q174K, D177E, V179VI, T200A, E203D, Q207E, R211K, H221Y  
83591 83591 NRTI NNRTI M41L, D67N, K70R, V75M, M184V, L210W, T215Y, K219E G190A, P236PL K49R, V60I, D86E, A98AS, I135T, S162D, D177E, I178M, G196GE, T200E, E203K, Q207A, R211K, E224EK, L228H  
83595 83595 NRTI NNRTI M184V A98G, G190A K122E, D123G, I135L, I142V, S162A, K173S, D177DE, V179I, Q207T, R211S, F214L P133PL 
83597 83597 NRTI NNRTI M41L, D67N, V75M, M184V, L210W, T215Y V106A, F227L K43KQ, V60I, K104R, V118I, K122E, D123S, I135T, K173S, D177E, V179I, G196GE, T200A, I202V, Q207A, R211RK