<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Billings (2016)
Title HIV-1 genetic diversity among incident infections in Mbeya, Tanzania.
Citation ARHR
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 97
NumPts 97
Subtype C, A, D, CRF10_CD

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
CO0041V3 CO0041V3 None    D25E, V31I, M50I, Q95P, F100Y, L101I, T112V, T124N, T125A, K136Q, F185FY, V201I, T218I, L234I, A265V, R269K, D278A  
CO0053V5 CO0053V5 None   A128T S17N, L28I, F100Y, L101I, T112V, T125A, K136Q, V201I, K215N, T218I, L234I, A265V, R269K, D278A S283G, D288N 
CO0077V1 CO0077V1 None    D25E, V31I, L101I, T112V, T124A, T125A, K136Q, V201I, K215N, T218I, L234I, A265V, R269K, D278A S283G 
CO0098V3 CO0098V3 None    K14R, A21T, V31I, M50I, I60M, I72V, I113V, S119T, T124A, T125A, V126F, G134N, K136Q, F139Y, D167E, V201I, T206S, T218I, L234I S283D, D288N 
CO0260V5 CO0260V5 None    E11D, K14R, A21T, A23V, D25E, V31I, M50I, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134S, K136Q, D167E, V201I, N222K, L234V S283G 
CO0272V4 CO0272V4 None    E11D, K14R, I72V, T112V, I113V, T124A, T125A, G134D, K136Q, D167E, V201I, L234I S283G 
CO0329V1 CO0329V1 None   T97A E11D, K14R, V31I, V32I, D41N, I60M, T112I, I113V, T124A, T125A, V126F, G134D, I135V, K136Q, D167E, V201I, I203M, I208L, E212A, Q216H, T218I, D232E, L234I, D253H S283G 
CO0330V4 CO0330V4 None    K14R, V31I, I60M, I72V, T112V, S119T, T124A, T125A, V126F, K136Q, D167E, V201I, K211R, L234I S283G 
CO0335V1 CO0335V1 None    S17N, M50L, I72V, T112V, I113V, T124A, T125A, V201I, T218I, K219Q, N222K, L234I, D256E S283G 
CO0377V4 CO0377V4 None    K14R, V31I, M50T, I72V, E96D, F100Y, L101I, T112V, S119T, T124TA, T125A, K136Q, V201I, T206S, T218I, L234I, A265V, R269K, D278A S283G 
CO0434V7 CO0434V7 None    V31I, M50V, I60M, I72V, T112V, I113V, S119P, T125A, V126F, G134S, K136Q, F139Y, D167E, V201I, K211R, Y227F, L234V, A265V, R269K D286N 
CO0439V5 CO0439V5 None    E11D, K14R, I72V, L101I, G106A, T112I, T124A, T125A, G134D, K136Q, D167E, I200M, V201I, I203M, I220L  
CO0543V2 CO0543V2 None   T97A K14R, V31I, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134N, I135V, K136Q, D167E, V201I, L234I S283G, R284G, D286N 
CO0694V7 CO0694V7 None    K14R, V31I, M50T, I72V, E96D, F100Y, L101I, T112V, S119T, T124A, T125A, K136Q, V201I, T206S, T218I, L234I, A265V, R269K, D278A S283G 
CO0735V4 CO0735V4 None    L45I, T112V, I113V, T124A, T125A, K136Q, V201I, T218I, K219Q, L234I, D278A S283G 
CO0778V2 CO0778V2 None    S17N, V31I, I72V, I84M, F100Y, L101I, T112V, S119P, T124N, T125A, K136Q, V201I, T206S, K215N, T218I, L234I, A265V, R269K, D270N, D278A G163I 
CO0783V0 CO0783V0 None    K14R, R20K, D41N, M50I, L63V, I72V, L101I, T112V, I113V, T124A, T125A, G134D, K136Q, D167E, V201I, D270N S283G 
CO0815V3 CO0815V3 None    K14R, S24N, D25E, L45V, M50T, L101I, T112I, T124S, T125A, K136Q, V201I, K215N, T218L, L234I, D278A S283G 
CO0844V2 CO0844V2 None    S39C, M50I, I72V, F100Y, L101I, K111R, T112V, T124S, T125A, K136Q, D167E, V201I, N222T, L234I, I268L, R269K, D278A S283G, R284G 
CO0907V4 CO0907V4 None    S17N, R20K, M50I, I72V, T112V, T124A, I161X, V201I, K211R, L234I, A265V  
CO0921V2 CO0921V2 None    K34R, M50I, I72V, F100Y, L101I, T112I, T124A, T125A, K136Q, H171Y, V201I, T218I, L234I, D278A S283G 
CO0933V4 CO0933V4 None    T122I, T124A, T125A, K136Q, V201I, L234I, R269K, D278A S283G 
CO0984V2 CO0984V2 None    D25E, F100Y, L101I, T112V, T124N, T125A, K136Q, V201I, I208M, K211T, T218I, L234I, A265V, R269K, D278A S283G 
CO3016V6 CO3016V6 None   L74M S17N, R20K, F100Y, L101I, T112V, T124A, T125A, F181L, V201I, K211R, L234I, A265V, D278A S283G, R284G 
CO3022V7 CO3022V7 None    K14R, R20K, V31I, I72V, G106A, V110I, T112V, I113V, T124A, T125A, K136Q, V201I, L234I S283G 
CO3038V3 CO3038V3 None    T124A, T125A, G134N, K136Q, D167E, K173R, V201I, L234I S283G 
CO3058V6 CO3058V6 None    V31I, I72V, I84M, P90S, Q95P, F100Y, L101I, T112V, T124N, T125A, K136Q, F181L, V201I, L234I, R269K, D278A  
CO3063V5 CO3063V5 None    E11D, S24N, D25E, V31I, V32I, M50I, L101I, T112I, T124N, K136Q, D167E, V201I, K215N, T218I, L234I, A265V, R269K, D278A S283G 
CO3083V4 CO3083V4 None    E11D, V31I, L45Q, I60M, I72V, A98G, T112V, I113V, T124A, T125A, V126F, K136Q, D167E, V201I, I203M, Q216N, N222T, L234I, D270N R224Q, S283G 
CO3103V3 CO3103V3 None    E11D, S17N, M50L, I84IM, A91E, F100Y, L101I, T112V, S119R, T124A, T125A, K136Q, D167E, V201I, T218I, L234I, D278A S283G 
CO3168V4 CO3168V4 None    V31I, M50I, I72V, Q95H, F100Y, L101I, T112V, T124A, T125Q, K136Q, V201I, L234I, R269K, D278A V281M, S283G 
CO3256V2 CO3256V2 None    S17N, D25E, S39C, M50I, F100Y, L101I, T112V, S119P, T124A, T125A, K136Q, Q137R, K188R, V201I, T218S, Y227F, L234V, A265V  
CO3278V6 CO3278V6 None    D25E, L45Q, M50R, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, R269K I268S, S283G 
CO3301V1 CO3301V1 None    E11D, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134N, I135V, K136Q, F139Y, D167E, V201I, K211T, Q216N, L234I, A265V, R269K, D278A, C280S S283G 
CO3326V4 CO3326V4 None    E11D, V32I, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134S, I135V, K136Q, V201I, L234I, D278A S283G 
CO3337V2 CO3337V2 None    S17N, M50L, I72V, K103R, T112V, T124A, T125A, K127R, K188R, I200L, V201I, K211R, T218I, L234I, A265V, R269K, D278A  
CO3365V2 CO3365V2 None    K14R, V31I, M50I, I72V, L101I, G106A, T124S, T125A, D167E, G193R, V201I, S255N, K273Q T112G, S283G 
CO3415V1 CO3415V1 None    D25E, V31I, M50T, I84M, F100Y, L101I, T112V, T124S, T125A, K136Q, V201I, L234I, D256E S283G 
CO3426V5 CO3426V5 None    D6E, S17N, M50I, L101I, T112I, T124N, T125A, K136Q, D167E, K173R, I182V, V201I, T206S, K211R, T218I, K219Q, L234I, A265V, R269K, D278A S283G, D286N 
CO3440V7 CO3440V7 None    V31I, L45Q, M50I, I60V, L101I, A105V, T112V, T124S, T125A, K136Q, V201I, T206S, I208L, T218I, L234I, R269K, D278A  
CO3468V1 CO3468V1 None    S17N, L45V, I72V, T112V, I113V, T124A, T125A, G134D, D167E, V201I, Q221S, L234I, D256E, I268L  
CO3473V1 CO3473V1 None    V37I, I72V, F100Y, L101I, T112V, T124N, T125A, K136Q, V201I, T218L, L234I  
CO3504V7 CO3504V7 None    K14R, A21T, V31I, I60M, I72V, E96D, T112I, I113V, T124A, T125A, V126F, G134N, I135V, K136Q, D167E, V201I, T218I, L234I, V249I S283G 
CO3589V1 CO3589V1 None    D25E, V31I, M50I, I72V, F100Y, L101I, T112V, T124N, T125A, A128V, K136Q, D167E, V201I, T218I, L234I, A265V, R269K, D278A H12HR, S283G 
CO3637V5 CO3637V5 None    K14R, D25E, M50I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, D256E, D278A  
CO3651V7 CO3651V7 None    K14R, D25E, V31I, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, L234I, I268V S283G, D286N 
CO3672V4 CO3672V4 None    S17N, V31I, L45Q, I72V, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, R269K, D278A V281M 
CO3718V3 CO3718V3 None    K14R, V31I, M50T, I60M, I72V, E96D, T112V, I113V, T124A, T125A, V126F, G134N, K136Q, F139Y, D167E, S195T, V201I, L234I S283G 
CO3728V2 CO3728V2 None    K7R, M50I, I72V, V88I, F100Y, L101I, T124A, T125A, K136H, V201I, K211R, T218I, K219Q, L234I, A265V, D278A S283G 
CO3800V5 CO3800V5 None    E11D, S17N, D25E, V31I, I72V, L74I, E96D, F100Y, L101I, G106A, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, A265V, D278A S283G 
CO3812V6 CO3812V6 None    V31I, M50I, I72V, Y99F, L101I, K111R, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, A265V, R269K, D278A S283G 
CO3817V2 CO3817V2 None   T97A K14R, V31I, L101I, K111R, T112V, T124A, T125A, K136Q, V201I, K211Q, Q216R, T218I, K219Q, L234I, R269K, D278A  
CO3873V1 CO3873V1 None    D25E, V31I, F100Y, L101I, T112V, T124A, T125A, K136Q, V165I, V201I, L234I, A265V, R269K, D278A T218IV, S283G 
CO3878V2 CO3878V2 None    E11D, K14R, A21T, V31I, I60M, I72V, I113V, T124A, T125A, V126F, G134N, I135V, K136Q, F139Y, D167E, V201I, K211R, Q216N, N222H, L234I S283G, D286N 
CO3892V6 CO3892V6 None    E11D, S24N, D25E, V31I, L45Q, A91T, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218L, I220V, L234I, R269K, D278A S283G 
CO3969V6 CO3969V6 None    S24G, D25E, Q95P, L101I, T124A, T125A, K136Q, D167E, V201I, T218I, L234I, A265V S283G 
CO3979V3 CO3979V3 None    S17N, D25E, V31I, M50I, I72T, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, A265V, R269K, D278A S283G 
CO6022V7 CO6022V7 None    E10D, V31I, S39N, M50I, I72V, I84M, F100Y, L101I, T112V, T124S, T125A, K136Q, D167E, V201I, L234I, R269K, D278A  
CO6033V4 CO6033V4 None    K14R, V31I, K34R, D41N, G59E, G70E, I72V, L101I, T112V, S119P, T124N, T125A, I135V, K136N, V201I, L234I, A265V, D278N D25K, S283G 
CO6040V4 CO6040V4 None    D6N, K14R, D25E, V31I, K34R, G59E, I72V, L101I, T112V, S119P, T122I, T124N, T125A, I135V, K136N, V201I, L234I, A265V, D278N S283G 
CO6041V3 CO6041V3 None    S17N, V31I, M50I, F100Y, L101I, G106A, K111Q, T112V, T124A, T125A, K136Q, D167E, V201I, T218I, L234I, A265V, R269K, D278A S283G 
CO6095V1 CO6095V1 None    A21T, M50R, I72V, L74V, T112V, I113V, T124A, T125A, V201I S283G 
CO6106V5 CO6106V5 None    D25E, V31I, M50T, I84M, A91E, F100Y, L101I, T112V, S119R, T124N, T125A, K136Q, D167E, V201I, T206S, I208L, K211R, K215N, T218I, L234I, R269K, D278A S283G 
CO6139V7 CO6139V7 None    S24N, D25E, F100Y, L101I, T112V, T124A, T125P, K136Q, D167E, K173R, V201I, T218L, K219Q, L234I, D278A S283G 
CO6146V7 CO6146V7 None    D25E, A91E, F100Y, L101I, T112V, S119R, T124N, T125A, K136Q, V201I, L234I, I251L, R269K, D278A  
CO6161V5 CO6161V5 None    E11D, K14R, A21T, V31I, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134N, I135V, K136Q, D167E, K173R, V201I, L234I, A265V S283G, R284G, D286N 
CO6172V5 CO6172V5 None    D25E, L45Q, M50I, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, L234I, D270N, D278A S283G 
CO6273V3 CO6273V3 None    D6E, K14R, S17N, V31I, S39N, M50I, I72V, T112V, T124S, K136Q, K173R, V201I, Q216N, L234I, D253E, S255T, A265V, R269K, D278A S283G 
CO6273V4 CO6273V4 None    D6E, K14R, S17N, V31I, M50I, I72V, T112V, T124S, K136Q, K173R, V201I, Q216N, L234I, S255T, A265V, R269K, D278A S283G 
CO6322V4 CO6322V4 None    K14R, D25E, V31I, L45Q, M50L, I72V, F100Y, L101I, G106GA, T112V, S119G, T124A, T125A, K136Q, V201I, T218I, L234I, D278A  
CO6405V4 CO6405V4 None    S17N, R20K, T124A, T125A, V126L, I135V, G163E, V201I, K211R, L234I  
CO6471V1 CO6471V1 None    K14R, D25E, V31I, F100Y, L101I, T124A, T125A, K136H, K188R, V201I, K211R, T218I, L234I, A265V, R269K, D278A I217IT, S283G 
CO6480V4 CO6480V4 None    S17N, V31I, M50I, I72V, I84M, L101I, T112V, T124N, K136Q, I182V, V201I, T218I, L234I D288N 
CO6540V3 CO6540V3 None    S17N, D25E, V31I, L45V, I72V, F100Y, L101I, T112V, T124N, T125A, K136Q, V201I, T218I, L234I, A265V, R269K, D278A V281G, S283G 
CO6545V3 CO6545V3 None    S17N, D25E, V31I, L45V, I72V, F100Y, L101I, T112V, T124N, T125A, K136Q, V201I, T218I, L234I, A265V, R269K, D278A S283G 
CO6577V5 CO6577V5 None    M50L, I72V, I84M, L101I, T112V, I113V, T124A, V201I, I203M, T218I, L234I, A265V  
CO6592V5 CO6592V5 None    K14R, A21T, V31I, I60M, E96D, T112V, I113V, T124A, T125A, V126F, G134N, K136Q, F139Y, V201I, L234V S283G, D286N 
CO6631V3 CO6631V3 None    K14R, S24N, D25E, V31I, M50I, D55N, L74I, F100Y, L101I, T112V, S119A, T124A, T125A, K136Q, V201I, T206S, K215N, T218I, L234I, D278A S283G 
CO6637V7 CO6637V7 None    D3E, K7I, K14R, A21T, V31I, E35Q, S39N, I60M, I72V, I113V, S119T, T124A, T125A, V126F, G134N, I135V, K136Q, F139Y, D167E, K173R, V201I, T206S, Q216H, L234I, A265V, I268V S283G, D286N 
CO6644V2 CO6644V2 None    S24N, D25E, A91E, F100Y, L101I, T112V, S119R, T124N, T125A, K136Q, V201I, T218I, L234I, I251L, R269K, D278A  
CO6647V5 CO6647V5 None    V31I, L74I, I84M, E96D, L101I, T112V, T124N, K136Q, K173R, V201I, T206S, K219Q, L234I, D278A  
CO6650V1 CO6650V1 None    M50L, I72V, I84M, L101I, T112V, I113V, T124A, V201I, I203M, T218I, L234I, A265V  
CO6728V5 CO6728V5 None    I72V, F100Y, L101I, T112V, T125A, K136Q, G193R, V201I, T206S, T218I, K219Q, L234I, A265V S283G 
CO6763V2 CO6763V2 None    S17N, K34R, I84M, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218L, K219Q, L234I, D278A S283G 
CO6785V5 CO6785V5 None    S24N, D25E, A91E, L101I, T112V, S119R, T124N, T125A, K136Q, V201I, T218I, L234I, I251L, A265V, R269K, D278A V281M 
CO6811V5 CO6811V5 None    S17N, I72V, E96D, G106A, T112V, I113V, T122I, T124A, T125A, D167E, V201I, T206S, T218I, K219Q, I220L, N222S, L234I, D278A S283G, R284G 
CO6812V3 CO6812V3 None    K14R, D25E, V31I, M50T, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T206S, K211R, T218I, K219Q, L234I, D278A S283G 
CO6830V7 CO6830V7 None    K14R, A21T, V31I, D41N, L101I, T112V, I113V, T124A, T125A, V126F, G134N, K136Q, F139Y, V201I, L234V S283G, D286N 
CO6838V1 CO6838V1 None   L74M D25E, V31I, L45Q, M50I, I72V, I84M, A91E, F100Y, L101I, T112V, S119R, T125A, K136Q, V201I, T218I, L234I, D278A S283G 
CO6847V7 CO6847V7 None    D25E, M50I, I72V, A91E, F100Y, L101I, T112V, S119R, T124N, T125A, K136Q, V201I, T218I, L234I, I251L, D278A  
CO6854V1 CO6854V1 None    K14R, R20K, D25E, K34R, F100Y, L101I, T112V, T124A, T125A, K136Q, G193D, V201I, T218I, L234I, A265V, D278A S283G 
CO6867V2 CO6867V2 None   T97A S17N, V31I, M50I, I72V, F100Y, L101I, T112V, T124S, T125A, K136Q, D167E, K173R, V201I, K211Q, T218I, Q221K, L234I, D256E, R269K, D278A W131R 
CO6917V7 CO6917V7 None    D25E, V31I, M50I, F100Y, L101I, T112V, T124S, T125A, K136Q, V201I, T218L, L234I, A265V, R269K, D278A S283G 
CO6952V1 CO6952V1 None    M50L, I72V, I84M, L101I, T112V, I113V, T124A, V201I, I203M, T218I, L234I, A265V  
CO6974V7 CO6974V7 None   F121C V31I, D41N, M50T, S57G, I60M, I72V, T112V, I113V, T124A, T125A, V126F, K136Q, D167E, K173R, V201I, Q216H, Q221K, L234I S283G 
CO6975V2 CO6975V2 None    S17N, I72V, T112V, I113V, T122I, T124A, T125A, D167E, V201I, T206S, T218I, K219Q, I220L, L234I, D278A G106AV, S283G, R284G 
CO6980V0 CO6980V0 None    D25E, L45Q, M50I, F100Y, L101I, T112V, T124S, T125A, K136Q, V201I, T218I, L234I, R269K, D278A