Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Lam (2016)
Title Antiretroviral resistance after first-line antiretroviral therapy failure in diverse HIV-1 subtypes in the SECOND-LINE study.
Citation ARHR
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 492
NumPts 492
Subtype C, CRF01_AE, B, CRF02_AG, G, CRF12_BF, F, D, B + F, CRF33_01B, CRF44_BF, CRF74_01B, B + CRF01_AE, A, J


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Page 1   listing Isolate 1 to Isolate 100 from Total 492 Clinical PR Isolates

12012003 12012003 None    I13V, E35D, M36I, R41K, H69K, L89M  
12012007 12012007 None    L10LI, I13IV, G16E, M36I, R41K, H69K, L89M, I93L  
12012008 12012008 None    G16A, E35D, M36I, R41K, H69K, L89M  
12012012 12012012 None    I13V, E35D, M36I, R41K, R57RK, Q61QE, L63LP, H69K, L89M  
12012015 12012015 None    L10I, I13V, E35D, M36I, R41K, K45R, R57K, H69K, L89M, F99L  
12012016 12012016 None   L33F I13V, I15L, M36I, R41K, H69K, V82I, L89M, I93L, L97I  
12012018 12012018 None    I13IV, E35D, M36I, R41K, L63P, H69K, L89M  
12012020 12012020 None    L10I, I13V, G16A, M36I, R41K, H69K, K70R, L89M  
12012022 12012022 None    L10IV, I13V, E35D, M36I, R41K, C67CG, H69K, L89M  
12022001 12022001 None    E35D, M36I, R41K, K45R, L63P, H69K, L89M  
12022010 12022010 None    I13V, G16E, K20R, E35D, M36I, P39S, R41K, H69K, K70R, I72V, L89I  
12022018 12022018 None    L10I, I13V, G16E, E35D, M36I, R41K, L63T, H69K, K70R, L89M  
13011001 13011001 None    I15V, L19I, M36L, N37S, L63T, I64IM, H69K, V82VI, L89M, I93L  
13012005 13012005 None    T12S, I15V, L19T, K20R, E35D, M36I, R41N, L63V, H69K, L89M, I93L  
13012006 13012006 None    K14E, G16E, E35D, M36I, N37D, I62V, E65K, H69K, V82I, L89M, I93L  
13012010 13012010 None    G16E, E35D, M36I, I62V, H69K, L89M  
13012016 13012016 None    K14KR, I15V, K20R, E35D, M36I, R41K, Q61QE, H69K, L89M, I93L  
13012020 13012020 None    I13V, E35D, M36I, R41K, H69K, L89M  
14012001 14012001 None    I13V, K20R, M36I, R41K, D60E, H69K, L89M, I93L  
16011013 16011013 None    T12S, I15V, L19I, M36I, R41K, Q61E, L63P, H69K, I93L  
16011016 16011016 None    T12S, I15V, L19I, M36I, R41K, R57K, D60E, L63T, H69K, T74A, L89M, I93L  
16011030 16011030 None    T12S, I15V, G16E, L19LV, K20R, M36I, R41K, D60DE, Q61QE, L63N, H69K, I72T, L89I, I93L D25DY 
16011034 16011034 None    T12S, I15IV, L19I, M36I, R41K, K45R, L63P, C67H, H69K, L89M, I93L  
16011046 16011046 None    I15V, L19I, M36I, R41K, L63Q, H69K, I93L  
16012011 16012011 None    T12S, I15V, L19I, M36I, R41K, L63T, H69K, T74S, L89M, I93L  
16012013 16012013 None    T12S, I15V, L19T, M36V, R41K, L63P, H69K, K70R, V82I, L89M, I93L  
16012022 16012022 None    L19T, K20R, M36I, R41K, L63T, H69K, L89M, I93L  
16012027 16012027 None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
16012029 16012029 None    T12S, K14R, I15V, L19T, M36I, N37ST, R41K, L63T, I64V, H69K, I93L  
16012030 16012030 None    T12S, I13V, I15V, L19I, M36I, R41K, L63P, I64L, H69K, I72IV, I93L  
16012037 16012037 None    T12TS, I15V, L19I, M36I, R41P, L63S, H69K, L89M, I93L  
16012041 16012041 None    T12S, I15V, L19I, M36I, R41K, L63PS, H69K, I93L  
17011001 17011001 None    E35D, R57K, L63S, A71V, I72V, V77I, V82VI, I93L  
17012001 17012001 None    I15V, L63P, V77I, I93L  
17022004 17022004 None    N37S, I62V, L63P, A71V, I72V, P79S, I93L  
17022006 17022006 None    L10I, V11T, K45R, Q61E, I62V, L63P, I64L, A71V, I72T, V77I, P79S, I93L  
17022009 17022009 None    E35D, N37D, L63P, I93L  
20011006 20011006 None    I3IL, L10M, T12S, L19I, E35D, M36I, R41K, R57K, D60E, I62V, H69K, L89M  
20012002 20012002 None    I13V, I15V, E35D, M36I, R41K, R57RK, L63P, H69K, L89M  
20012007 20012007 None    L10LI, T12S, I15V, L19T, M36I, R41K, L63P, H69K  
20012013 20012013 None    T12S, L19T, K20R, M36I, R41K, Q61E, L63P, H69K, L89M, I93L  
20012015 20012015 None    T12S, I15V, L19I, E35D, M36I, R41K, L63T, H69K, T74S, L89M, I93L  
20012017 20012017 None    T12S, I15V, L19I, E35D, M36I, R41K, H69K, L89M, I93L  
20012025 20012025 None    T12S, L19T, K20R, M36I, N37D, L63P, H69K, L89M, I93L  
20012026 20012026 None    T12S, I15V, L19T, K20R, M36I, R41K, I62V, L63P, H69K, V77I, I93L  
20012028 20012028 None    T12S, I15V, L19I, M36I, R41K, H69K, L89M, I93L  
20012034 20012034 None    T12S, I15V, L19T, M36I, R41K, H69K, L89M, I93L  
20022002 20022002 None    T12A, I15V, L19I, M36I, L63P, H69K, L89M, I93L  
20022008 20022008 None    T12S, I15V, L19I, K20M, E34A, E35D, M36I, P39S, R41K, D60E, Q61E, L63P, H69K, L89M, I93L  
20022018 20022018 None    I13IM, I15V, M36I, R41K, D60E, L63P, C67Y, H69K, L89M, I93L  
20022027 20022027 None    I15V, L19V, M36I, R41K, D60E, Q61E, H69K, L89M, I93L  
20022031 20022031 None    T12S, I15V, L19I, M36I, R41K, Q61E, H69K, T74S, L89M, I93L  
2022001 2022001 None    L10V, I15V, G16E, E35D, M36I, R41K, R57K, D60E, Q61D, I72T  
2042006 2042006 None    T12I, I13V, I15V, E35D, M36I, R41K, K43R, R57K, Q61D, L63S, I72T  
2071002 2071002 None    T12I, Q18L, E35D, M36I, R41K, R57K, Q61N, I62V, I64V, C67S, H69Y  
2072008 2072008 None    G16E, L19I, E35D, M36I, R41K, R57K, Q61N, K70E, I72V, Q92K  
2072019 2072019 None    L10I, V11T, K14KR, L19I, Q61E, I62V, L63P, A71V, I72V, V77I, P79S, I93L  
2091001 2091001 None    L19IV, M36I, K43I, L63A  
2092006 2092006 None    T12N, L19I, N37S, I62V, L63P, V77I, I93L  
21011001 21011001 None    L10V, T12K, I13V, K14E, G16E, K20I, M36I, R41K, L63H, H69K, K70R, L89M  
21011004 21011004 None    I13V, K14R, K20I, E35Q, M36I, N37D, R41K, L63P, C67E, H69K, V82I, L89M  
21012002 21012002 None   L33I, Q58E L10I, I13V, K14R, K20I, E35Q, M36I, N37D, R41K, R57K, L63P, C67E, H69K, K70KR, V82I, L89M  
21012006 21012006 None    I13V, L19P, K20I, M36I, N37D, R41K, L63P, H69K, L89M  
21012010 21012010 None    T12K, I13V, K14R, K20I, E35Q, M36I, N37DE, R41K, R57K, L63LP, C67E, H69K, V82I, L89M  
21012012 21012012 None    I13A, K20I, E35D, M36I, R41K, H69K, L89M  
21012021 21012021 None    I13V, K14KR, K20I, M36I, R41K, I64L, H69K, K70R, L89M  
21012022 21012022 None    I13V, G16E, K20I, E35G, M36I, P39T, L63S, I64L, H69K, V77I, L89M  
21012023 21012023 None    I13V, K20I, E35D, M36I, R41K, C67S, H69R, V82I, L89M  
21031004 21031004 None    T12IV, I13A, G16E, K20I, E35D, M36I, R41K, H69K, I72T, L89I I85IM 
21032001 21032001 None    I13V, K14R, Q18QK, K20I, E35Q, M36I, N37D, R41K, R57K, L63P, C67E, H69K, V82I, L89M G94C 
21032009 21032009 None    I13V, K14KR, K20I, M36I, N37ND, R41K, K43R, L63LDHV, H69K, V82I, L89M C67IM, I85IM 
2112003 2112003 None    K14KR, Q18E, K20KR, E35D, M36MI, R41K, R57K, Q61N, L63P, V77VI, I93L  
3011001 3011001 None    I15V, M36MI, R57K, I62V, L63T, I64V, E65D, I72V, T74A, V77VI  
3012003 3012003 None    G16E, E35D, N37S, R41K  
4021002 4021002 None    T12P, K14R, G16E, L63S, I64V, V77I, I93L  
6012001 6012001 None    E35D, N37D, A71V, V77I, I93L  
7012001 7012001 None    R57K, L63Q, I64V, V77I  
9011001 9011001 None   L33F I13V, I62V, H69K, I72M, L89M, F99L  
9011002 9011002 None    L10LI, E35D, M36I, R41K, R57K, L63S, H69K, L89M  
9012004 9012004 None    I13V, R41RK, H69K, T74S, V77I, L89M  
9012014 9012014 None   V11VI I13V, G16GE, E35D, M36I, N37D, R41K, K45R, I62V, L63H, H69K, L89M, T91V  
9021001 9021001 None    T12TI, I13V, M36I, N37ND, R41K, K43KR, L63P, H69K, K70KR, A71AT, L89I  
9021002 9021002 None    I13V, L33V, M36I, R41K, L63LP, I64V, E65D, I72IM, V75VI  
9022005 9022005 None    I13IV, E35D, M36I, R41K, L63LFPS, H69K, L89M  
9031001 9031001 None    I13V, K20KT, M36I, R41K, H69K, V82I, L89M  
9032006 9032006 None    I13V, I15V, E35D, M36I, R41K, L63T, H69K, L89M  
9032012 9032012 None    T12P, I13V, M36I, L63P, H69K, L89M  
9032015 9032015 None   L33F I13V, M36L, N37D, R41K, H69K, K70R, L89M, I93V  
99021002 99021002 None    T12S, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
99022016 99022016 None    T12S, I15V, L19I, K20R, E35D, M36I, R41K, H69K, L89M, I93L  
99022018 99022018 None    T12S, I15V, L19M, M36I, R41K, D60E, I62V, L63P, H69K, V82I, L89M, I93L  
99022019 99022019 None    T12S, I15V, L19I, M36I, R41K, L63P, H69K, I93L  
99022023 99022023 None    L10M, L19T, M36I, R41K, K45R, R57K, Q61E, I62V, C67S, H69Q, L89M, I93L  
99022024 99022024 None    T12S, I15V, Q18QE, L19T, K20R, E35D, M36I, R41K, H69K, V77VI, L89M, I93L  
99022026 99022026 None   L33F L19T, N37S, R41K, L63I, H69K, L89M, I93L  
99022029 99022029 None    T12S, L19I, E35D, M36I, R41K, D60E, H69K, L89M, I93L  
99022037 99022037 None    T12A, I13IM, I15V, G16E, L19I, M36I, R41K, D60E, L63S, H69K, L89I, I93L R8RL 
99022038 99022038 None    T12S, I15V, L19I, K20R, M36I, N37S, Q61E, I62V, C67S, H69K, L89M, I93L  
99032001 99032001 None    I13V, K14R, I15V, I62V, L63P  
99032009 99032009 None    I15V, E35D, M36I, R41K, R57K, Q61N, K70N, I72T