Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Li (2005)
Title Molecular epidemiology of the heterosexual HIV-1 transmission in Kunming, Yunnan province of China suggests origin from the local IDU epidemic.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 26
NumPts 26
Subtype CRF08_BC, CRF07_BC, B, C, CRF01_AE

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
01CNKM011 01CNKM011 None None A62V  V35T, E36A, T39D, S48T, E53D, V60I, T69N, I135V, S162C, Q207E, R211K, V245Q  
01CNKM012 01CNKM012 None None   V35M, E36A, T39D, S48T, V60I, D121Y, K122E, I135T, V245Q, D256E, A272P, K277R  
01CNKM013 01CNKM013 None None   V35T, E36A, T39D, S48T, V60I, K102R, D121Y, K122E, H208Y, R211K, V245Q, A272P, K277R Q278P 
01CNKM014 01CNKM014 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, R211Q, V245Q, A272P, K277R, E291D, V292I, I293V  
01CNKM015 01CNKM015 None None   V35T, E36A, T39D, S48T, E53D, V60I, I135V, S162C, I178L, Q207E, R211K, V245Q, A272P, K275R, K277R, T286A, E291D, V292I, I293V  
01CNKM017 01CNKM017 None None   V35T, E36A, T39D, S48T, E53D, V60I, K101R, I135V, S162C, I178L, Q207G, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V K281T 
01CNKM018 01CNKM018 None None   V35T, E36A, T39N, S48T, V60I, K122E L12F 
01CNYX001 01CNYX001 None None   V35T, E36A, T39D, S48T, E53D, V60I, I135V, S162C, Q207E, R211K, V245Q, A272P, K277R, K281R, T286A, E291D, V292I, I293V  
01CNYX002 01CNYX002 None None   V35T, E36A, T39D, S48T, E53D, V60I, I135V, S162C, P176S, Q207G, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V  
02CNKM201 02CNKM201 None None   V35T, E36A, T39D, S48T, E53D, V60I, I135V, S162C, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, E297A  
02CNKM202 02CNKM202 None None   V35T, E36A, T39D, S48T, V60I, D121H, K122E, V245Q, A272P, K277R, T286A, E291D, I293V  
02CNKM203 02CNKM203 None None   V35T, E36A, T39D, S48T, E53D, V60I, I135V, S162C, D177E, I178M, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, I293V  
02CNKM204 02CNKM204 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, D123E, T200I, R211S, V245Q, A272P, K277R, T286A, E291D, V292I, I293V  
02CNKM205 02CNKM205 None None   V35T, E36A, T39D, S48T, E53D, V60I, D123E, I135V, S162C, I178L, Q207E, R211K, V245Q, A272P, K277R, T286A, V292I, I293V  
02CNKM206 02CNKM206 None None   V35T, E36A, T39D, S48T, E53D, V60I, T69S, I135V, Y146S, S162C, Q207E, R211K, V245Q, A272P, K277R, K281R, T286A, E291D, V292I, I293V  
02CNKM207 02CNKM207 None None   V35T, E36A, T39D, S48T, V60I, K103R, D121Y, K122E, V179I, V245Q, A272P, K277R, T286A, E291D, V292I  
02CNKM208 02CNKM208 None None M41L, L210W  K20R, V35T, E36A, T39D, S48T, E53D, V60I, K122E, D123S, I135V, K173I, I178M, G196R, T200I, Q207A, K238R, V245Q, A272P, K277R, T286A, E291D, V292I, I293V  
02CNKM209 02CNKM209 None None L210W, T215Y  V35T, E36EA, T39D, V60I, D121DY, K122E, D123S, K173I, Q174QK, D177DE, I178M, G196GR, T200TI, Q207AP, R211RKNS, K238KR, V245Q, A272P, K277R, T286A, E291D, V292I, I293V  
02CNKM210 02CNKM210 None None   I135T, S162C, I202L, R211K, V245M, K277R, Q278E, I293V  
94CNKM001 94CNKM001 None None  V108I T69N, I135V, S162C, V245M  
95CNKM002 95CNKM002 None None   I135V, S162C, T200A, V245E, K277R, Q278E  
96CNKM003 96CNKM003 None None   E6D, K11T, V35T, T39K, K43E, K102R, K122E, D123S, K173I, Q174K, D177E, I178M, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V D121G 
96CNKM004 96CNKM004 None None   T69P, K102R, I135V, S162C, T200A, K277R, Q278E  
96CNKM005 96CNKM005 None None   V35T, E36A, T39D, S48T, E53D, V60I, I135V, S162C, Q207E, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V  
96CNKM006 96CNKM006 None None   K102R, I135V, S162C, T200A, K277R, Q278E  
97CNKM007 97CNKM007 None None   V35T, E36A, T39D, S48T, V60I, D121Y, K122E, V245Q, A272P, K277R, T286A, E291D, V292I, I293V N81I, R83E, T84L, Q85K, D86I 

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