<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Charpentier (2014)
Title Genotypic resistance profiles of HIV-2-treated patients in West Africa.
Citation AIDS
SelectedGene RT
SelectedSpecies HIV2
SelectedType Clinical
NumIsolates 25
NumPts 25
Host Human

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
001TS 001TS_RT RTI RTI M184V, S215Y F227L I5V, T11E, L21I, K22R, T27S, K40R, T58S, K102E, K104R, E122P, D123N, V135T, M138S, E169D, A174T, P176S, I179T, K200R, G211N, L212M, D218E, D250E, I251V, Y271F, S272P, K277R, L279I I8V, R20K, E32L, K35N, K82T, I90V, S107T, I108V, H121D, Q126K, A134S, T163S, Q166K, L180I, T194S, G195D, L203S, C232Y, T237K, L244I, Q248E, A267T, I270L 
004CP 004CP_RT RTI RTI Q151M, M184V I181V I5V, E6Q, K104R, D123E, M138A, K200R, F214L, F227Y, Q228K, D250E, S272P, I329V, G334D, H335N, E344G V2I, K4E, R20K, S107T, I108V, A134S, V167I, G195D, E207Q, C232Y, L244I, K307R, Y317C, S332D 
006CP 006CP_RT RTI RTI M184I  K102E, K104R, L109I, E122P, M138A, E169D, P176S, G211D, L212M, D218E, Q228R, D250E, I251V, Y271F, S272P, L279I, E304Q, S311E, Y317S, E322G, E324P, I329V, G334A, H335N, T338S, E344G I90V, S107T, I108V, I118V, H121D, A134S, Q166K, L180I, G195D, L203S, C232Y, T237K, L244I, Q248E, I270L, R281K, L303F, Q320K, K323V, S332N, Q333L, E345D 
017CP 017CP_RT RTI RTI M184V, S215Y, E219D  I5V, L21I, K22R, T27S, E32Q, K40KR, T58S, K104R, E122P, M138A, M164L, R165A, E169D, P176K, I179T, G211N, D218E, F227I, Q228K, D250E, I251V, Y271F, S272P, K277R, L279I, E304Q, S311E, Y317S, E322G, E324P, I329V, G334A, H335N, E344G K4R, I8IV, T11K, G15DE, R20K, I90V, K102S, I108V, H121D, A134S, T163S, Q166K, V167I, L180I, T194S, G195D, L203S, L212I, C232Y, T237K, L244I, Q248E, I270L, R281K, K307R, I308T, Q320K, K323IV, S332N, Q333L, E345D 
018CP 018CP_RT RTI RTI M184V  L21I, K22R, T27S, K66R, K102E, K103R, K104R, E122P, M138A, E169D, I179T, K200R, G211D, Q228K, D250E I8V, T11K, R20K, E32L, I90V, S107T, I108V, I118V, H121D, E139G, R165G, Q166K, P176G, L180I, T194S, G195D, E207Q, L212I, C232Y, T237K, L244I, Q248E 
019CP 019CP_RT RTI RTI M184V I181V L21I, K22R, T27S, K66R, K102E, K104R, E122P, M138T, E169D, I179T, K200R, G211S, D218E, Q228K, D250E I8V, T11K, R20K, E32L, I90V, S107T, I108V, I118V, H121D, A134S, T163S, Q166K, P176N, L180I, I189V, T194S, G195D, L212V, C232Y, T237K, L244I, Q248E, I251S 
021CP 021CP_RT RTI RTI M184V, S215Y  T11Q, L21I, K22R, T27S, K35R, K40R, K102E, K103R, K104R, E122P, D123N, M138A, P176S, I179T, K200R, L212M, L246I, K249R, D250E, I251V, Y271F, S272P, K277R, H278N, L279I, R284K, L303M, Y317S, E322G, E324P, I329V, G334A, H335N, E344G, K347R V2M, I8V, R20K, E32L, R78RK, E79EK, S107T, I108V, H121D, A134S, T163S, Q166K, L180I, I189V, T194S, G195D, L203S, C232Y, T237K, L244I, Q248E, I270L, R281K, K286R, M287L, S311G, Q320K, K323V, S332N, Q333L, E345N 
043TS 043TS_RT RTI RTI   L21I, K22R, T27S, D86EG, K102E, K104R, E122P, M138A, Y162H, R165L, E169D, R172K, P176S, I179T, K200R, G211D, D250E, I251R, Y271F, K277R, L279I, E304Q, S311E, Y317S, E322G, E324P, I329V I8V, T11K, R20K, E32L, T60V, I75V, V83A, S107T, I108V, I118V, H121D, A134S, T163S, Q166K, L180I, I189V, T194S, G195D, L203S, N210H, L212I, C232Y, T237K, L244I, Q248E, A268S, I270L, S272M, R281K, Q320K, K323V, S332N 
103CP 103CP_RT RTI RTI   K104R, R125K, V135T, M138A, Y162H, K200R, F227Y, D250E, S272P, I329V, G334D, H335N V2I, R20K, E49V, S107T, I108V, A134S, V167I, G195D, C232Y, L244I, Y317C, Q330I, S332D 
106CP 106CP_RT RTI RTI M184V I181V K64R, K102E, K104R, L109I, E122P, V135T, M138S, G211N, L212M, D218E, F227I, Q228R, D250E, I251V, Y271F, S272P, L279I, E304Q, S311E, Y317S, E322G, E324P, I329V, G334A, H335N, E344G, K347R I63V, I90V, I108V, H121D, A134S, T163S, Q166K, P176E, L180I, T194S, G195D, L203Y, E207Q, C232Y, T237K, L244I, Q248E, A268S, I270L, R281K, Q320K, K323V, S332N, Q333L, E345D 
108CP 108CP_RT RTI RTI M184V, S215FY, E219D I181V L21I, K22R, T27S, K40R, K102E, K103R, K104R, E122P, D123E, M138T, E169D, P170PS, I179T, K200R, G211D, L212M, D218E, Q228K, K249R, D250E, I251R, Y271F, S272P, K277R, L279I, R284K, E304Q, S311E, Y317S, E322G, E324P, I329V, G334A, H335N, E344G, K347R I8V, T11KR, R20K, E32L, I90V, S107T, I108V, I118V, H121D, A134S, T163S, Q166K, P176E, L180I, I189V, T194S, G195D, C232Y, T237K, L244I, Q248E, I270L, L303F, Q320K, K323I, S332N, Q333L, E345N 
CB017 CB017_RT RTI RTI M184V  L109V, V111I, D123E, M138A, Q228R, D250E, I251V, S272P R20K, P51S, S107T, I108V, A134S, T163S, V167I, G195GDNS, C232Y, L244I 
CB024 CB024_RT RTI RTI  I181V, F227L T11E, L21I, K22R, T27S, K28R, K35R, K66R, K102R, K104R, E122P, D123DN, V135T, M138A, E169D, P176S, I179T, K200R, G211D, L212M, D218E, Q228K, D250E, I251V, Y271F, S272P, K277R, L279I I8IV, R20K, E32L, V83Y, T84~, I90V, I108V, H121D, A134S, T163S, Q166K, L180I, T194S, G195D, L203S, C232Y, T237K, L244I, Q248E, I270L, R281K 
CB035 CB035_RT RTI RTI I75IM, Q151M, M184V, S215F I181V I5V, L21I, K22R, T27S, K40KR, K102E, K103R, K104R, E122P, D123E, M138T, E169D, P176S, I179T, G211N, D218E, Q228K, D250E, Y271F, S272P, K277R, L279I, R284K, E304Q, S311E, Y317S, E322G, E324P, G334A, H335N I8V, T11K, R20K, E32L, V83VA, I90V, S107T, I108V, I118V, H121D, A134S, Q166K, L180I, I189V, T194S, G195D, L212I, D224E, C232Y, T237K, L244I, Q248E, I251K, I270L, L303F, Q320K, K323I, S332N, Q333L 
CB043 CB043_RT RTI RTI M184I  E39D, T163TI, K200R, D250E, I251R, S272P D76E, R78RK, N81T, S107T, I108V, A134S, C232Y, E324D 
CB052 CB052_RT RTI RTI Q151M, M184V  I5V, E6K, E32D, D86E, K104R, R125K, V135T, M138A, I145IM, K200R, F227I, D250E, I251V, S272P, I329V, Q330L, G334D, H335N V2I, R20K, S107T, I108V, H121D, E122EK, A134S, V167I, G195D, C232Y, L244I, R281K, K307R, Y317C, S332D 
CB063 CB063_RT RTI RTI M184V I181V I5V, L21I, K22R, T27S, K66R, K102E, K103R, K104R, E122P, D123E, M138T, Y162H, I179T, G211D, L212M, D218E, Q228K, K238R, D250E, I251V, Y271F, S272P, S311E, Y317S, E322G, E324P, I329V, G334A, H335N, E344G, K347R I8V, T11K, R20K, E32L, I90V, S107T, I108V, H121D, Q126P, A134S, T163S, R165RG, Q166K, P176D, L180I, I189V, T194S, G195D, L203F, E207Q, C232Y, T237K, L244I, Q248E, A268S, I270L, R281K, Q320K, K323V, S332N, Q333L, E345N 
CB069 CB069_RT RTI RTI K70N, M184V  L21I, K22R, T27S, K43R, K102E, K103R, K104R, E122P, M138A, E169D, I179T, K200R, G211D, L212M, D218E, Q228K, K249R, D250E, Y271F, S272P, K277R, L279I I8V, K9R, T11K, R20K, E32L, I90V, S107T, I108V, H121DN, A134S, T163S, Q166K, P176N, L180I, I189V, T194S, G195D, C232Y, T237K, L244I, Q248E, I251NS, A268S, I270L 
MI004 MI004_RT RTI RTI M184V  I5V, E39G, T58S, K64R, K82R, K104KR, M138A, Y162H, D250EK, S272P, I329V, G334D, H335N, T338A, E344G R78RK, S107T, A134S, Y146YC, T163M, V167I, V178VI, G195D, C232Y, L244I, K307R, Y317H 
MI006 MI006_RT RTI RTI K65R, K70KR, Q151M, M184V  K35R, K64R, V111I, M138A, K223KR, F227I, T237TN, D250E, S272P R20K, S107T, I108V, A134S, C232Y, V263I 
MI015 MI015_RT RTI RTI Q151M  P1L, V2L, I5V, K22R, E32D, K35KR, K104R, V111I, D123G, V135T, M138A, R172RK, A174AT, K200R, F214L, D218E, F227Y K9E, T11K, R20K, Q91QR, S107T, I108V, A134S, V167I, L180I, G195D, C232Y 
MI018 MI018_RT RTI RTI D67N, K70N, Y115F, M184V I181V L21I, K22R, T27S, K35R, E44D, K102E, K104R, E122P, M138A, E169D, P176KQ, I179T, G211N, L212M, D218E, F221L, Q228K I8V, T11K, R20K, E32L, I90V, S107T, I108V, I118V, H121D, A134S, T163S, Q166K, L180I, I189V, T194S, G195D, C232Y, T237K, L244I 
US014 US014_RT RTI RTI K65R, D67DN  M138A, D250E, S272P R20K, N69T, I75V, S107T, I108V, V111VIM, A134S, C232Y, I251K 
US025 US025_RT RTI RTI   L21I, K22R, T27S, K28KR, K102E, K104R, E122P, V135T, M138S, Y162YH, E169D, P176S, K200R, G211N, L212M, D218E, F227I, Q228K, D250E, I251V I8V, T11K, R20K, E32L, P51S, I90V, I108V, I118V, H121D, A134S, R165S, Q166K, L180I, T194S, G195D, L203S, C232Y, T237K, L244I, Q248E 
US068 US068_RT RTI RTI A62V, K65R, M184V, E219D I181V L21I, K22R, T27S, K35R, K64KR, N69NS, K102E, K103R, K104R, E122P, M138T, R165A, E169D, P176S, I179T, K200R, G211S, D218E, Q228K, D250E, I251T, Y271F, S272P, K277R, L279I, T296S, E304Q K4R, I8V, T11K, R20K, E32L, I90V, S107T, I108V, I118V, H121D, A134S, T163S, Q166K, L180I, I189V, T194S, G195D, L212I, C232Y, T237K, L244I, Q248E, I270L, R281K, L303Y