<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Witaningrum (2016)
Title Genotypic characterization of human immunodeficiency virus type 1 derived from antiretroviral therapy-naive individuals residing in Sorong, West Papua.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 31
NumPts 31
Subtype CRF01_AE, B, G + Unknown


Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
PB1 PB1 None None   K20R, T39A, K49R, T107S, K122E, I135V, S162C, E169D, V179I, R211K, L228M V10E 
PB10 PB10 None None  V179D K122E, D123Q, I135V, E138A, S162C, R211G  
PB11 PB11 None None   V111I, K122E, I135V, S162C, G196E, I202V, R211G, L228M D76Y, Q85R 
PB12 PB12 None None   K104R, I135V, S162C, I178L, Q207E, R211K  
PB13 PB13 None None   E6K, K122E, S162C, I178M, G196E, L228M  
PB14 PB14 None None   E6D, K20R, V35T, E36D, T39K, K43E, T69S, K122E, D123S, K173I, Q174K, D177E, I178M, T200I, Q207A, R211S, V245E  
PB15 PB15 None None   E6D, K11T, V35T, E36D, T39K, K43E, K102R, K122E, D123S, K173L, Q174K, D177E, I202V, Q207D, V245E  
PB16 PB16 None None   E6D, V35T, E36D, T39K, K43E, K122E, D123S, K173I, Q174K, D177G, Q207A, R211S, K238R, V245E  
PB17 PB17 None None   E6D, K11T, V35T, T39K, K43E, W88S, K101Q, K122E, D123N, K173T, Q174K, D177E, V179I, Q207A, R211S, K238R, V245E  
PB18 PB18 None None  G190R K122E, I135V, S162A, I178M, R211G, L228M  
PB19 PB19 None None   E6D, K11T, V35T, T39K, K43E, W88S, K101Q, K122E, D123S, K173T, Q174K, D177E, V179I, Q207A, R211S, K238R, V245E  
PB2 PB2 None None   E6D, K11R, V35T, T39K, W88S, K122E, D123S, I135T, E138A, I142V, R172K, K173I, Q174K, D177E, I178L, V179T, Q207A, R211N, F214L, V245K  
PB21 PB21 None None   E6D, V35T, T39K, S68G, W88C, K122E, D123S, R172K, K173I, Q174K, D177E, I178M, V179I, Q207A, R211S, K238R, V245E  
PB22 PB22 None None   E6D, K11R, V35T, T39K, E40D, W88S, K122E, D123S, I135T, E138A, I142V, R172K, K173I, Q174K, D177E, I178L, V179T, Q207A, R211N, F214L, V245E  
PB23 PB23 None None   E6D, V8I, K11T, V35T, T39K, K43E, K122E, D123N, I135V, T139A, K173I, Q174K, D177E, I178M, I202V, Q207A, R211S, V245E  
PB24 PB24 None None A62V  E6D, K11T, V35T, E36D, T39K, K43E, K122E, D123S, E138A, R172K, K173I, Q174K, D177E, I178M, Q207A, R211S, K238R, V245E  
PB25 PB25 None None   E6D, V35T, T39K, K43E, V60I, K122E, D123S, E169K, K173I, Q174K, D177E, G196E, T200I, Q207A, R211S, D218N, V245K, E248K R143K 
PB27 PB27 None None   S105A, T107S, K122E, D123N, S162C, T200A, L228M G18A 
PB3 PB3 None None   E6A, V35T, T39K, K43E, K122E, D123N, S162C, K173I, Q174K, D177E, I178M, Q207A, L210M, R211S, V245E  
PB31 PB31 None None   E6D, K102R, K122E, I135V, S162C, K173N, V189I, L228M, V241L  
PB35 PB35 None None   K122E, I135V, T139A, I142S, S162C, Q207K, R211K  
PB37 PB37 None None   K11R, K122E, I135V, S162C, Q207K, R211K  
PB39 PB39 None None   V35I, V106I, K122E, I135V, S162C, R211G, E248D  
PB4 PB4 None None   V35T, K102Q, K104N, K122E, I135V, S162C, G196E, T200I, I202V, R211G  
PB41 PB41 None None   E6D, V35T, T39K, K43E, T69S, K122E, D123S, K166R, F171Y, K173L, Q174K, D177E, I178M, Q207A, R211S, K238R, V245E  
PB44 PB44 None None   K102R, D121H, K122E, I135V, S162C, I178M, T200I  
PB45 PB45 None None   E6D, K11T, V35T, T39D, V60I, K102R, K122E, D123N, K173L, Q174K, D177E, I178M, V179I, T200I, Q207A, R211S, V245E, E248D  
PB5 PB5 None None   K11T, V35T, T39K, K43E, S68G, K122E, D123N, K166R, K173I, Q174K, D177E, Q207A, R211S, K238R, I244K, V245Q, E248N  
PB6 PB6 None None   V21I, V35T, V60I, K102R, K122E, D123S, E169D, K173A, Q174R, D177E, I178L, T200E, Q207E, R211K, V245K, D250E, S251D  
PB7 PB7 None None   V35T, T39A, K122E, D123N, I135V, S162C, G196E, Q207E, L228M  
PB8 PB8 None None   E6D, K11T, V35T, T39N, D123N, I135V, I142T, K173T, Q174K, D177E, V179I, Q207D, R211S, V245E