<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Gashnikova (2016)
Title Predominance of CRF63_02A1 and multiple patterns of unique recombinant forms of CRF63_A1 among individuals with newly diagnosed HIV-1 infection in Kemerovo Oblast, Russia.
Citation Arch Virol
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
NumIsolates 47
NumPts 47
Subtype CRF63_02A1, A


Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
10 IN_10 None    E11D, S24N, V31I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N  
11 IN_11 None    E11D, S24N, V31I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N  
12 IN_12 None    E11D, S24N, V31I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N D6Y 
14 IN_14 None    D3E, R20K, V31I, A49P, I72V, L74I, I84L, T112V, S119P, T124S, T125A, G134N, K136Q, D167E, G193E, V201I, L234I, S255N  
17 IN_17 None    E11D, K14R, R20K, S24N, V31I, V32I, I60V, T112V, I113V, S119P, T122I, T124S, T125A, G134N, K136Q, V201I, L234I, S255N  
18 IN_18 None    E11D, K14R, S24N, V31I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N  
19 IN_19 None    E11D, K14R, S24N, V31I, V32I, M50I, I72V, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N  
21 IN_21 None    E11D, S24N, V31I, L45V, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, L234I, S255N  
22 IN_22 None    E11D, K14R, S24N, V31I, V32I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V165I, V201I, T218I, L234I, S255N  
23 IN_23 None    E11D, K14R, S24N, V31I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, L234I, S255N  
24 IN_24 None    E11D, S24N, V31I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, L234I, S255N  
25 IN_25 None    E11D, K14R, S24N, V31I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, L234I, S255N  
27 IN_27 None    E11D, S24N, V31I, V32I, M50I, T112V, I113V, S119P, T124N, T125A, G134N, K136Q, V201I, T218I, L234I, S255N D286N 
29 IN_29 None    K14R, S24N, V31I, M50I, L74I, T112V, S119P, T124S, T125A, G134N, K136Q, V201I, L234I, S255N  
IN_3 None    E11D, E13D, K14R, S24N, V32I, I72V, L74I, T112V, I113V, S119P, T124G, T125A, G134N, K136Q, V201I, N222K, L234I, S255N, I268V  
30 IN_30 None    E11D, K14R, S24N, V31I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N  
31 IN_31 None    D3E, S17C, R20K, V31I, D55N, L63V, I72V, L74I, T112A, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N  
32 IN_32 None    E11D, S24N, V31I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, L234I, S255N  
33 IN_33 None    E11D, K14R, S24N, L28M, V31I, V32I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N  
36 IN_36 None    E11D, K14R, S24N, V31I, V32I, M50I, L101I, T112V, I113V, S119P, T124N, T125A, G134N, K136Q, V201I, T218I, L234I, S255N, V259I  
37 IN_37 None    E11D, K14R, S24N, V31I, V32I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N  
39 IN_39 None    E11D, K14R, S24N, V31I, M50T, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N  
IN_4 None    E11D, S24N, V31I, V32I, M50I, I84L, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, L234I, S255N  
40 IN_40 None    D3E, E11D, R20K, V31I, I72V, L74I, T112I, I113V, S119P, T124S, T125A, G134N, K136Q, D167E, V201I, K215N, L234I, S255N  
41 IN_41 None    E11D, K14R, S24N, V31I, M50I, T112V, I113V, S119P, T124N, T125A, G134N, K136Q, V201I, L234I, S255N  
42 IN_42 None    E11D, S24N, V31I, A49P, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, L234I, S255N  
43 IN_43 None    D3E, R20K, V31I, I72V, L74I, T112V, S119P, T124S, T125A, G134N, K136Q, D167E, V201I, T218I, L234I, S255N  
44 IN_44 None    K14R, S24N, V31I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V165I, V201I, T218I, L234I, S255N  
45 IN_45 None    E11D, S24N, V31I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, L234I, S255N  
46 IN_46 None    E11D, K14R, S24N, V31I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V165I, V201I, L234I, S255N  
47 IN_47 None    E11D, K14R, S24N, V31I, M50I, K103R, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N  
48 IN_48 None    K14R, S24N, V31I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V165I, V201I, L234I, S255N  
49 IN_49 None    E11D, S24N, V31I, M50MI, T112V, I113V, S119P, T124S, T125A, G134N, I135V, K136Q, V201I, L234I, S255N  
IN_5 None    D3E, E11D, R20K, V31VI, V32VI, L63LV, I72IV, L74I, T112I, I113V, S119P, T124S, T125A, G134D, K136Q, D167E, V201I, T206S, L234I, S255N  
50 IN_50 None    E11D, K14R, S24N, V31I, V32I, M50I, I72V, T112V, I113V, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N E287A 
51 IN_51 None    D3E, R20K, V31I, I72A, L74I, T112V, I113V, S119P, T124S, T125A, G134D, K136Q, D167E, V201I, L234I, S255N C130F 
52 IN_52 None    E11D, K14R, S24N, V31I, V32I, M50I, T112V, I113V, S119P, T124N, T125A, G134N, K136Q, V201I, T218I, L234I, S255N  
54 IN_54 None    E11D, K14R, S24N, V31I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N  
55 IN_55 None    E11D, K14R, S24N, V31I, M50I, L74LI, T112V, I113V, S119P, T124N, T125A, G134N, K136Q, V201I, T218I, L234I, S255N  
56 IN_56.1 Unknown    E11D, K14R, S24N, V31I, M50L, T112V, I113V, S119P, T124N, T125A, G134N, K136Q, V165I, T218I, L234I, S255N  
57 IN_57 None    R20K, V31I, I60T, T112V, I113V, S119P, T124N, T125V, G134N, K136Q, D167E, V201I, T218I, L234I, S255N, I268V  
58 IN_58 None    D3E, R20K, V31I, I72V, L74I, T112V, S119P, T124S, T125A, G134N, K136Q, D167E, G193E, V201I, T218I, L234I, S255N  
IN_6 None    E11D, K14R, S24N, V31I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N  
61 IN_61 None    E11D, K14R, S24N, V31I, V32I, L45Q, M50I, T112A, I113IV, S119P, T124S, T125A, G134N, K136Q, V201I, L234I, S255N, D279G  
62 IN_62 None    E11D, K14R, S24N, V31I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N D256DN 
IN_7 None    D3E, E11D, R20K, V31I, I72V, L74I, T112K, I113V, S119P, T124S, T125A, G134N, K136Q, G163E, D167E, G193E, V201I, Q216R, L234I, S255N  
IN_9 None    E11D, K14R, S24N, V31I, M50I, T112V, I113V, S119P, T124S, T125A, G134N, K136Q, V201I, T218I, L234I, S255N