<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Han (2015)
Title Development of an HIV-1 subtype panel in China: isolation and characterization of 30 HIV-1 primary strains circulating in China.
Citation PLoS ONE
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 27
NumPts 27
Subtype B, CRF01_AE, CRF07_BC, Unknown, B + C

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
BJ2006001 BJ2006001 None None M41L, L210W, T215F A98G, V179E, Y181C, G190A T39A, K43Q, K103R, D121H, K122E, I135T, E169D, K173E, I202V, R211K, L228R, Q278H, A288S, I293V, S322A, I329L, T386I, A400T, V435L, N447S, E449D, L452V, R461K, S468T, S519N, K527N, A554S  
BJ2010001 BJ2010001 None None   E6D, K11T, V35T, T39R, K43E, K122E, D123S, S162C, K173S, Q174K, D177E, I178M, E203D, Q207A, R211S, K238R, V245E, I293V, E312T, V317T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K388R, K390R, A400T, T403M, V417VI, N447S, D471E, Q480H, L491S, K512R, L517A, S519N, Q524E, A534S, A554T  
BJ2010002 BJ2010002 None None   V35I, I135T, K173E, Q207E, V245T, D250N, V261I, I274V, K277R, I293V, E297K, E312Q, I329L, G359S, T386I, K390R, A400T, T403V, E449D, S468A, H483Q, A508G, L517V, K527N  
BJ2010003 BJ2010003 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, V245Q, E248V, K249Q, A272P, K277R, T286A, E291D, V292I, I293V, V317VI, G335D, T338S, R356K, G359T, T377M, K390R, A400T, E404D, E432D, V435A, A437V, L452I, Q464K, D471E, Q480H, H483C, L491S, S519N, K530R, A534S, A554S  
GD2005003 GD2005003 None None   S162C, T200A, K275R, Q278E, L283I, I293V, D324DE, Q334L, F346Y, R356RK, R358RK, K366R, T369TA, E370EG, Q373H, K374KR, V417T, V435E, D460N, R461T, S468T, L491AT L425LF 
GD2005004 GD2005004 None None   E6D, K11T, V35T, T39K, V106I, K122E, D123S, S162C, K173I, Q174K, D177E, T200A, Q207S, R211S, K238R, V245E, I274V, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, E432D, N447S, D471E, Q480H, L491S, K512R, L517I, Q524E, K530R, A534S, K558R  
GD2005006 GD2005006 None None   P1PS, P4Q, E6D, V8I, V35T, T39K, K43A, V60I, K122E, D123S, K173I, Q174K, D177E, I178M, V179I, Q207K, R211S, K238R, V245E, E291D, V292I, I293V, P294Q, K311R, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, E404D, E432D, V435A, F440~, Y441~, N447S, D460N, D471E, Q480H, H483Y, L491S, K512R, L517I, S519N, Q524E, A534S, A554S  
GD2005025 GD2005025 None None   E6D, V8VI, K11T, V35T, T39K, K43E, V60I, L109LV, K122E, D123S, K173I, Q174K, D177E, I178M, T200I, Q207A, R211S, V245E, T286A, E291D, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, E432D, V435VIL, F440~, Y441~, N447S, D471E, Q480H, H483Q, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
GD2005028 GD2005028 None None   K122E, I135R, S162C, E169D, T200A, A272S, K277R, Q278E, E297Q, V317A, Q334L, P345Q, F346Y, V435E, F440~, Y441~, D460N, R461K, V467VI, S468T, L491V, E492EK, V548VI, A554S  
GX2005002 GX2005002 None None K70KT  E6D, K11KT, K20R, V35T, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, I178M, T200I, Q207A, R211S, K238R, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, H361HP, K366R, T369A, A371V, K390R, K395R, A400T, T403M, E432D, V435VI, N447NS, D471E, Q480H, H483Q, L491S, A502AV, I506IL, K512R, L517V, S519N, Q524E, A534S, A554S  
GX2005016 GX2005016 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, I178M, T200V, Q207A, R211S, K238R, V245E, L283LI, E291D, V292I, I293V, E312T, I326V, I329V, G335D, F346Y, M357K, G359S, K366R, T369A, A371V, I375V, K395R, A400T, T403V, E432D, N447S, D471E, Q480H, H483Q, L491S, K512R, E514D, L517V, S519N, Q524E, A534S, A554S G462GE 
GX2006185 GX2006185 None None F116Y, Q151M Y181I E6D, K11T, V35T, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, I178M, V179I, Q207A, R211S, V245E, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357R, R358G, G359S, K366R, A371V, K390R, K395R, A400T, T403M, E432D, N447S, D471E, Q480H, H483Q, L491S, L517V, S519N, Q524E, A534S, A554S  
HN2002024 HN2002024 None None   S162C, V245E, K277R, Q278E, I293V, D324E, Q334L, F346Y, I375V, K390R, V417T, V435E, N447S, D460N, R461K, S468T, L491V, V548I M16MI, E53EK 
HN2010001 HN2010001 None None   I135V, S162C, T200A, R211RK, K275KR, Q278E, I293V, E297EAG, Q334L, P345Q, F346Y, K347R, K390R, E404ED, V417I, V435E, N447S, D460N, R461K, S468T, H483HQ, L491A, V548I I341IM 
HN2010002 HN2010002 None None   D123E, S162C, E169D, V179I, V189VI, T200AE, E204D, L228LF, A272AT, K277KR, Q278E, T286TA, I293V, Q334L, P345Q, F346Y, K366KR, K390R, V417T, V435IL, N447S, D460DN, R461K, S468T, H483X, L491AV, V531I, V548I Y146Y*, P150PS 
HN2010003 HN2010003 None None   I135V, S162C, Q174E, T200A, Q207K, R211S, A272P, K277R, Q278E, L283I, I293V, Q334L, F346Y, A355T, G359S, E399D, A400AT, V417T, V435E, N447NS, E449D, D460N, R461K, S468T, T477A, H483Y, L491AV, K512R, S519SR, V548I, A554S  
HN2010004 HN2010004 None None   V35I, I135L, S162Y, N175Y, T200E, L228LF, Q278E, V292I, E297K, I309L, Q334L, P345Q, F346Y, V417I, V435E, D460N, R461K, S468T, L491V, V548I  
HN2010005 HN2010005 None None   K122E, I135V, S162C, E169ED, T200A, Q278E, I293IV, D324DE, Q334L, F346HY, R356RK, K366R, K390KR, I411IMV, V417T, V435E, D460N, R461K, S468T, T470P, L491A, V548I, A554S  
NX2005012 NX2005012 None None   K102R, I135V, S162C, K173Q, T200A, V245E, K277R, Q278E, V292I, I293V, Q334L, F346Y, G359S, K390R, E413ED, V417IT, V435E, T450TINS, K451R, D460N, R461K, S468T, L491EG, V548I  
SD2006001 SD2006001 None None D67R, F77L, M184V K103N P14PA, K20R, I31X, V35L, I50V, K65E, R83RG, K101Q, V106I, D123E, I135V, S162C, T200A, K277R, Q278E, I293V, Q334L, P345Q, F346Y, A400T, V417T, E432D, D460N, R461K, S468T, L469LI, L491A, H539HP, E546EA P25S, G45W, S48S*, P52PS, N57NI, K64I, S68Q, T69Y, E79AG, T84P, D113DE, P140PT, K530KT, V536AG, G541EV 
SD2010001 SD2010001 None None   E6D, K11T, V35T, T39R, K43E, K122E, D123S, S162C, K173S, Q174K, D177E, I178M, T200A, E203D, Q207A, R211T, K238R, V245K, A272P, T286A, E291D, I293V, E312T, V317T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, T377L, T386I, K388R, K390R, A400T, V435I, N447S, D471E, Q480H, L491S, K512R, L517A, S519N, Q524E, A534S  
SD2013001 SD2013001 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, S162C, Q174E, D177E, E204R, Q207A, R211S, K238R, V245E, A272P, K281R, T286A, E291D, V292I, I293V, E312T, V317T, I326V, I329V, G335D, M357K, G359S, K366R, E370D, A371V, K390R, A400T, T403M, D471E, Q480H, L491S, K512R, L517I, S519N, Q524D, A534S, A554S  
SD2013005 SD2013005 None None   E28K, K32E, V35T, E36A, T39D, S48T, V60I, D121Y, K122E, V245Q, E248V, K249Q, A272P, K277R, E291D, V292I, I293V, I309V, K311R, G335D, T338S, R356K, M357R, G359T, T377M, K390R, A400T, E404D, E432D, A437V, L452I, Q464K, S468P, D471E, Q480H, H483C, L491S, S519N, A534S, A554S  
SD2013008 SD2013008 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, I135V, S162C, K173R, Q174N, I178M, Q207A, R211S, K238R, V245E, K249R, V292I, I293V, E312T, V317T, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, R461K, D471E, Q480H, L491S, K512R, L517I, S519N, Q524E, A534S, A554S  
SX2010001 SX2010001 None None M41L, M184V, L210W, T215Y, K219KN K103N, M230L I2V, E44D, K102Q, V111I, V118I, S162C, T200E, H208Y, R211K, L228H, D237DE, Q278E, L283I, I293V, E297Q, Q334L, P345Q, F346Y, R356K, G359S, T369V, T403A, E404ED, V417T, V435E, K454R, D460N, R461K, S468T, H483Q, L491A, T497S, V548I  
XJ2010001 XJ2010001 None None   E28K, K32E, V35T, E36A, T39D, S48T, K49R, V60I, D121Y, K122E, L210M, L228LI, V245Q, E248V, K249Q, A272P, K277R, T286A, E291D, V292I, I293V, E312A, G335D, R356K, G359T, T377M, K390R, A400T, E404D, E432D, V435L, A437V, L452I, Q464K, D471E, H483C, L491S, S519N, K530R, A534S, A554S  
ZJ2006001 ZJ2006001 None None K65R, T69~, K219R V106M, Y181C L34I, V35T, T39E, S48T, V60I, S68G, D86E, W88S, K122E, K166R, F214L, V245Q, A272P, K277R, V292I, I293V, G335D, R356K, G359T, A371T, T377M, K390R, T397I, A400T, E404D, E432D, V435A, L452I, Q464K, V466I, D471E, H483Y, L491S, L517I, S519N, K530R, A534S, A554S P157A, I556IT