Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Delgado (2015)
Title Phylogeny and phylogeography of a recent HIV-1 subtype F outbreak among men who have sex with men in Spain deriving from a cluster with a wide geographic circulation in western Europe.
Citation PLoS ONE
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 16
NumPts 16
Subtype F

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
P2563 P2563 None    E11D, S17N, I72V, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, Q221K, L234V, D256E, S283G  
VA0053 VA0053 None    S17N, L101I, S119P, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, L234V, D256E, S283G  
X2871 X2871 None    E11D, S17N, I72V, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, Q221K, L234V, D256E, V259I, S283G  
X2873 X2873 None    E11D, S17N, I72V, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, L234V, D256E, S283G  
X2898 X2898 None    S17N, V32I, I72V, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, Q221K, L234V, D256E, S283G  
X2922 X2922 None    E11D, S17N, I72V, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, Q221K, L234V, D256E, S283G  
X3016 X3016 None    E11D, S17N, I72V, A91T, E96D, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, L234V, D256E, S283G  
X3069 X3069 None    E11D, S17N, I72V, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, Q221K, L234V, D256E, S283G  
X3070 X3070 None    E11D, S17N, I72V, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, Q221K, L234V, D256E, S283G  
X3079 X3079 None    S17N, I72V, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, L234V, D256E, S283G  
X3085 X3085 None    E11D, S17N, I72V, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, Q221K, L234V, D256E, S283G  
X3097 X3097 None    S17N, L28I, I72V, A91T, E96D, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, L234V, D256E, S283G  
X3125 X3125 None    E11D, S17N, M22I, L45V, I72V, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, Q221K, L234V, D256E, S283G  
X3308 X3308 None    E11D, S17N, V32I, I72V, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, L234V, D256E, S283G  
X3361 X3361 None    E11D, S17N, I72V, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, L234V, D256E, S283G  
X3364 X3364 None    E11D, S17N, I72V, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, Q221K, L234V, D256E, S283G