<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Hora (2015)
Title Genetic characterization of a panel of diverse HIV-1 isolates at seven international sites.
Citation PLoS ONE
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 166
NumPts 166
Subtype B, C, A, D, CRF01_AE, CRF02_AG, G, F, CRF47_BF, CRF04_cpx, CRF63_02A1, CRF09_cpx

 
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Page 1   listing Isolate 1 to Isolate 100 from Total 166 Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
DE00109CN003 DE00109CN003 None    K14R, A21T, L45V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G 
DE00109CN004 DE00109CN004 None    K14R, A21T, L45V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G 
DE00109CN005 DE00109CN005 None    K14R, A21T, V31I, V32I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G 
DE00109CN008 DE00109CN008 None    K14R, A21T, V31I, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, I220L, L234I E152EK, S283G 
DE00110CN007 DE00110CN007 None    A21T, A23V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G 
DE00110TH001 DE00110TH001 None    K14R, A21T, V31I, S39N, I72V, V88I, T112V, T125A, V126M, A133V, G134N, I135V, K136R, D167E, K173R, V201I, I203M, L234I S283D 
DE00111CN003 DE00111CN003 None    K14R, I72V, T112V, T124A, T125A, G134N, I135V, K136R, G193E, V201I, L234I S283G, D288N 
DE00111JP003 DE00111JP003 None    E11D, K14R, A21T, V31I, S39Q, E96D, L101I, T112V, T124A, T125A, G134N, I135V, K136Q, M154I, V165I, D167E, V201I, L234I E35K, E85K, S283G 
DE00206AO001 DE00206AO001 None    S17N, A23T, V31I, L63I, L74I, L101I, T112I, T124A, T125A, G134N, I135V, K136T, V201I, T206S, T218I, L234I, A265V, D278N S283G 
DE00208CM001 DE00208CM001 None    E11D, K14R, S24N, L63I, L74I, E96D, L101I, T112V, T124A, T125A, G134N, I135V, K136T, D167E, V201I, T206S, T218I, L234I S283G, R284G, D288N 
DE00210CM013.2 DE00210CM013.2 None    D3E, V31I, I72V, L74I, Y99F, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, T218I, L234I, A265V D286N 
DE01405ES002 DE01405ES002 None    K14R, G106A, T112I, T124A, T125A, G134N, K136T, V201I, T206S, Y227F, L234I, S255N, D256E S283G, D288E 
DE02210CM003 DE02210CM003 None    E11D, K14R, A21T, A23V, D41N, I72V, L101I, T112V, T124A, T125A, G134D, K136Q, D167E, V201I, T218I, L234I S283G, R284G, D288N 
DE02210CM005 DE02210CM005 None    D41N, M50I, I72V, L101I, T112V, S119T, T124S, T125A, G134D, K136Q, D167E, V201I, Y227F, L234I S283G, D286G 
DE02210CM006 DE02210CM006 None    K14R, A21T, V31I, D41N, M50I, I72V, L101I, T112V, S119P, T124A, T125A, G134D, K136Q, D167E, V201I, T206S, T218S, I220L, Y227F, L234I S283G, D288N 
DE02210CM012 DE02210CM012 None    A21T, D41N, M50I, I72V, L101I, T112V, S119T, T124S, T125A, G134D, K136Q, D167E, V201I, Y227F, L234I S283G, D286G 
DE04708ES003 DE04708ES003 None    S17N, L28I, L45Q, I72V, M154I, V165I, K188R, I208L, L234V, D256E S283G 
DEMA07RW002 DEMA07RW002 None   T97A V31I, A38V, S39N, I60M, I72V, I84L, T112V, I113V, T124A, T125A, V126F, G134N, K136Q, D167E, H171Y, V201I, Q221H, N222K, L234I, S255N S283G 
DEMA106ES002 DEMA106ES002 None    E11D, K14R, V31I, I60M, I72V, T112V, I113V, S119P, T124A, T125A, V126F, G134S, I135V, K136Q, D167E, K173R, V201I, L234I S283G 
DEMA108RU003 DEMA108RU003 None    R20K, V31I, I72V, L74I, T112V, I113V, S119P, T124S, T125A, G134D, K136Q, D167E, V201I, L234I, S255N  
DEMA109UG001 DEMA109UG001 None    K14R, V31I, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134N, I135V, K136Q, F139Y, G193D, V201I, K211R, D232E, S255N, A265V, R269K, D278A V281M, S283G, D288N 
DEMA111KE002 DEMA111KE002 None    K14R, V31I, S39N, I72V, L101I, K103R, T112V, S119P, T122I, T124A, T125A, G134N, D167E, F181L, V201I, Q216N, S255G, I268L, R269K, D270H S283G 
DEMA111RW002 DEMA111RW002 None    K14R, V31I, I72V, T112V, I113V, T124A, T125A, G134D, D167E, V201I, L234I, A265V S283G 
DEMA11KE001 DEMA11KE001 None    K14R, I72V, L101I, T112V, I113V, T124A, T125A, K136Q, D167E, V201I, R269K S283G 
DEMB03JP004 DEMB03JP004 None    K156N  
DEMB08ES001 DEMB08ES001 None    I72V, S119G, T122I, T124N, A265V  
DEMB08FR002 DEMB08FR002 None    V31I, S57N, V77A, L101I, T124A, V201I, T206S, K215N, N222K  
DEMB08UY001 DEMB08UY001 None    D6E, E10D, S24N, D25E, E35Q, S39N, L45I, I72V, S119P, T125V, K156N, Q216H, T218I, D253H, D256E  
DEMB09CN002 DEMB09CN002 None    S17N, V31I, S39N, L45I, I72V, L101I, K103R, T112K, T124A, K156N, D167E, I220V, S230N, K240R  
DEMB09CN013 DEMB09CN013 None    L28I, E96X, K156N, G189R  
DEMB09ES007 DEMB09ES007 None  R263RK  E10D, M50I, I72V, G106A, T124A, K136R, V165I, V201I, S230N, I268L  
DEMB09FR001 DEMB09FR001 None    E11D, R20K, L28I, V37I, S39Q, I72V, L101I, K111T, I113V, S119T, T124A, G193R, V201I, S230N S283G 
DEMB09US002 DEMB09US002 None    K7R, S17N, L101I, T124A, T125A, I135V, D167E, G193E, V201I, K219N, I220L, N222K, D256E  
DEMB09US003 DEMB09US003 None    S17N, V31I, M50I, D55N, T122I, T124N, T125A, M154I, K211R, S230N, A265V E152K 
DEMB10ES002 DEMB10ES002 None    K14R, L28I, S39C, I72V, V79A, I113V, S119P, T124N, V201I, V259I S283G 
DEMB10ES003 DEMB10ES003 None    L2S, E11D, A21T, A91E, L101I, S119R, T122I, T124A, G193E, L234I V281M, D288G 
DEMB10US007 DEMB10US007 None    E10D, S24N, V31I, A91T, L101I, S119R, T125A, I135V, E157Q, K160E, V201I, K211R, K219N, N222K, D256E  
DEMB11FR001 DEMB11FR001 None   E138D K188R, V201I, A265V  
DEMB11US002 DEMB11US002 None    L101I, K156N, I268L  
DEMB11US011 DEMB11US011 None    E11D, S24N, L45I, V201I, T206S, I208L, M275V  
DEMB11US015 DEMB11US015 None    S17N, L101I, T122I, T124A, K156N, D232E, D253E, D256E  
DEMB12CN006 DEMB12CN006 None    S17N, V32I, L45I, I72V, L101I, K103R, T112K, T124A, K156N, D167E, V201I, I220V, S230N, K240R  
DEMB12CN010 DEMB12CN010 None    K7R, E11D, F26Y, V37I, I72V, L101I, T112A, S119P, T122I, T125A, V126A, I208L, Q252K R284G 
DEMB12JP001 DEMB12JP001 None    E10D, S39C, L101I, K156N, I203M  
DEMB13ES010 DEMB13ES010 None    D6E, E11D, S17N, S39C, M50I, I72V, L101I, T112I, T124N, T125V, G163E, A175V, K211R, T218S, Y227F, D256E  
DEMBF09ES003 DEMBF09ES003 None    S17N, V31I, I72V, I84L, S119T, T124A, T125A, M154L, V165I, T206S, T218I, L234V, D253E, D256E  
DEMBF09ES006 DEMBF09ES006 None    E11D, S17N, L28I, I84L, L101I, T112I, S119P, T124A, T125A, K136Q, V165I, D167E, V201I, I203M, L234V, D256E S283G 
DEMBXXDE001 DEMBXXDE001 None    E11D, S17C, L45I, L101I, K160Q  
DEMBXXPL001 DEMBXXPL001 None    E11D, A21T, A23V, D25E, L101I, V201I, I204V, K211R  
DEMC00IN005 DEMC00IN005 None    K42Q, L101I, T112V, T122I, T124A, T125A, K136Q, S153A, V201I, L234I, R269K, D278A V281M, S283G 
DEMC00IN006 DEMC00IN006 None    V31I, D41N, K42Q, F100Y, L101I, T112V, T124A, F181L, V201I, L234I, D278A S283G 
DEMC00IN007 DEMC00IN007 None    K14R, V31I, K42Q, L101I, T112V, T124A, T125V, K136Q, V165I, Q177L, V201I, L234I, S255R, R269K, D278A S283G, R284G 
DEMC00IN008 DEMC00IN008 None    V31I, K42Q, I84L, F100Y, L101I, G106A, T112A, T124A, T125A, K136Q, V165I, I203M, T218I, L234I, S255N, R269K, D278A S283G 
DEMC00IN010 DEMC00IN010 None    V31I, K42Q, L101I, T112V, T124A, T125A, K136Q, I203M, T218I, L234I, R269K, D278A S283G 
DEMC07BR003 DEMC07BR003 None    E11D, S24N, D25E, V31I, M50T, L101I, S119P, T122I, T124N, K136Q, K215N, T218I, L234I, I251L, A265V, R269K, D278A  
DEMC07MW001 DEMC07MW001 None    K14R, D25E, V31I, I72V, I84M, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T206S, K219N, L234I, A265V, D278A S283G 
DEMC08MW002 DEMC08MW002 None    V31I, M50I, I72V, F100Y, L101I, G106A, T112M, T124A, T125A, K136Q, D167E, V201I, T218I, L234I, D278A S283G 
DEMC08MW004 DEMC08MW004 None    S17N, V31I, M50I, F100Y, L101I, T112I, T124N, T125A, K136Q, K156R, D167E, V201I, T206S, T218I, L234I, A265V, R269K S283G, R284G, D286N, D288N 
DEMC08NG001 DEMC08NG001 None    E11D, S17T, D25E, V31I, V37I, S39N, M50L, K71R, I72V, F100Y, L101I, T112V, S119P, T124A, T125A, K136Q, V165I, V201I, T218I, L234I, A265AT, D278A S283G 
DEMC08ZA011 DEMC08ZA011 None    D6E, S17N, D25E, P30S, M50I, I60V, I84M, F100Y, L101I, T112V, T124A, T125A, K188R, V201I, T206S, T218I, I220V, L234I, A265V, D278V S283G 
DEMC09MW006 DEMC09MW006 None    S17N, A21S, D25E, V31I, M50I, I72V, F100Y, L101I, T112I, S119P, T124A, T125A, K136Q, I141V, V201I, D207N, K211T, T218L, K219Q, L234I, N254K, S255G, R269K, D278A S283G 
DEMC09MW008 DEMC09MW008 None    S17N, V31I, M50I, I72V, I84M, E96D, L101I, T112V, T124A, K136Q, V201I, L234I, D278A S283G, R284G 
DEMC09ZA008 DEMC09ZA008 None    D25E, V31I, M50I, I72V, F100Y, L101I, K111R, T112V, T124A, T125A, K136Q, K188R, V201I, L234I, A265V, I268L, D278A S283G 
DEMC09ZA009 DEMC09ZA009 None    K14R, V31I, L45I, M50I, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, A265V, R269K, D278A S283G 
DEMC09ZM004 DEMC09ZM004 None    K14R, S24N, D25E, M50V, I72V, L74I, F100Y, L101I, T112V, S119T, T124A, T125A, K136Q, V201I, T218I, L234I, D278A S283G 
DEMC11ZM003 DEMC11ZM003 None    K14R, S24N, D25E, M50I, I72V, I84M, P90S, F100Y, L101I, T112I, T124A, T125A, K136Q, V165I, V201I, T218I, L234I, V260I, D278A S283G 
DEMC11ZM005 DEMC11ZM005 None    E11D, D25E, V31I, L101I, T112V, V126A, K136T, V201I, T218I, L234I, A265V, D278A R284G 
DEMC11ZM006 DEMC11ZM006 None    K14R, S17N, D25E, V31I, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, D256E, D278A S283G 
DEMC11ZM008 DEMC11ZM008 None    S17N, D25E, V31I, L74I, T93S, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, A265V, R269K, D278A S283G 
DEMC12ZA087 DEMC12ZA087 None    D25E, V31I, L45Q, L101I, T112V, T124N, K136Q, V165I, V201I, K215N, L234I, D270H, D278A S283D 
DEMC99IN001 DEMC99IN001 None    K42Q, L101I, T112V, T124A, T125A, K136Q, T218I, L234I, R269K, D278A S283G 
DEMC99IN002 DEMC99IN002 None    E11D, V32I, D41N, K42Q, I84M, L101I, T112V, T124A, T125A, G134N, K136Q, V201I, T218I, L234I, R269K, D278A D3N, S283G 
DEMC99IN003 DEMC99IN003 None  E138K  V31I, V32I, I84M, L101I, T112V, T125A, K136Q, I162V, D167E, V201I, I203M, K215N, L234I, D278A S283G 
DEMD07UG002 DEMD07UG002 None    S17N, M50L, I72V, T112V, I113V, T124G, T125A, K188R, V201I, T218I, L234V, A265V  
DEMD11KE003 DEMD11KE003 None    S17N, I72V, T112V, I113V, T124A, H171Q, V201I, L234I, A265V  
DEMD11UG003 DEMD11UG003 None    S17N, V31I, M50L, I72V, L101I, T112V, I113V, T122I, T124A, T125A, D167E, V201I, L234I, A265V  
DEMF110ES001 DEMF110ES001 None    E11D, S17N, I72V, L101I, S119P, T122I, T124A, T125A, I135V, K136Q, V165I, V201I, T218I, Q221K, L234V, D256E S283G 
DEMF210CM001 DEMF210CM001 None    M50I, L101I, T125V, I135V, K136N, Y194C, V201I, T206S, I208L, E212A, T218S, N222K, Y227F, L234I, S255N, D256E, K273KQ S283G 
DEMF210CM007 DEMF210CM007 None    Y15F, S17N, H51Q, T112I, T124A, T125A, K136Q, V201I, T206S, L234I, S255N, D256E D286A 
DEMG09ES002 DEMG09ES002 None    K14R, S17N, L101I, T112I, T124A, G134N, K136T, G163M, K173R, V201I, T206S, I208L, L234I, S255N, D256E S283G 
DEMG09KE001 DEMG09KE001 None   L74M, T97A K14R, V31I, I72V, L101I, T112V, T122I, T124A, T125A, G134N, K136T, K173R, I200M, V201I, T206S, L234I, S255N S283G 
DEMG10CM008 DEMG10CM008 None   T97A K14R, S17N, S24N, V31I, M50I, K71Q, L101I, T112V, S119R, T124N, T125A, G134N, K136T, D167E, V201I, T206S, L234I, S255N, D256E S283G 
DEURF06CM001 DEURF06CM001 None    V31I, S39N, L74I, L101I, T112V, T125A, G134N, I135V, K136T, V201I, T206S, T218I, L234I, A265V, R269K, D278N S283G 
DEURF07UG006 DEURF07UG006 None    S17N, S39C, M50L, L101I, T112V, T124N, K173R, V201I, T218S, Y227F, L234I, D256E S283G 
DEURF09KE002 DEURF09KE002 None    K14R, M50I, I72V, T112V, I113V, T124A, T125A, K136Q, V201I S283G 
DEURF09KE004 DEURF09KE004 None    S17N, M50L, I72V, L101I, T112I, I113V, T122I, T124A, T125A, V201I, I208M S283G 
DEURF09UG002 DEURF09UG002 None   T97A S17N, K34R, M50L, I72V, I84M, T112V, I113V, T124A, T125A, V201I S283G 
DEURF09UG004 DEURF09UG004 None   T97A S17N, S39N, M50L, I72V, T112V, I113V, T124A, T125A, V201I, L234V, D256E  
DEURF09UG005 DEURF09UG005 None    S17N, I72V, T112V, I113V, T124A, T125A, Q177L, V201I, T206S, L234I, D256E, V260I  
DEURF09UG014 DEURF09UG014 None    K14R, M22I, S24N, V31I, M50I, I60M, I72V, P90S, T112V, I113V, T124A, T125A, V126F, K127R, K136Q, F139Y, D167E, K173R, V201I, K211R S283G, D288N 
DEURF10DZ001 DEURF10DZ001 None    K14R, S24G, S57G, L101I, T112V, S119P, T124A, T125A, G134N, I135V, K136T, V201I, T206S, Q221R, L234V, D256E S283G 
DEURF10KE001 DEURF10KE001 None    K14R, V31I, I72V, L74I, L101M, T112V, I113V, T124A, T125A, K136Q, D167E, V201I, S255SN S283G 
DEURF10UG007 DEURF10UG007 None    E11D, D41N, M50L, I72V, L101I, T112V, I135V, F181L, V201I S283G 
DEURF10UG008 DEURF10UG008 None    S17N, L45V, M50L, I72V, T112V, I113V, T124A, T125A, D167E, V201I, L234I, S255N S283G 
DEURF10UG011 DEURF10UG011 None   T97A K14R, I60M, I72V, L101I, T112V, I113V, T124A, T125A, V126F, K173R, I182V, V201I S283G 
DEURF10UG012 DEURF10UG012 None    K14R, V31I, V75I, I84M, L101I, T112V, I113V, T124A, T125A, V201I, T206S, T218I, L234I, I251L, D256E, A265V, D279G  
DEURF11RW001 DEURF11RW001 None    E13D, M50I, T112V, T124N, K136Q, V201I, T218I, L234I, A265V, R269K, D278A  
DEURF11UG002 DEURF11UG002 None    K14R, A21T, V31I, I72V, T112V, I113V, T124A, V126F, G134N, I135V, V201I, K211R, Y227F, L234I, D253H, D256E  
DEURF11UG004 DEURF11UG004 None    K14R, S17N, I72V, L101I, T112V, I113V, T124A, T125A, V165I, V201I, T206S, L234I, I268L S283G 
DEURF11UG006 DEURF11UG006 None    K14R, A21T, V31I, M50I, I72V, T112V, I113V, T124A, T125A, V126F, G134S, I135V, K136Q, D167E, K173R, V201I, K211R, K219N, N222K, L234I D3N, S283G 

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