<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Jahanbakhsh (2013)
Title Molecular epidemiology of HIV type 1 infection in Iran: genomic evidence of CRF35_AD predominance and CRF01_AE infection among individuals associated with injection drug use.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 10
NumPts 10
Subtype CRF35_AD, CRF01_AE

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
10IR.THR01F 10IR.THR01F None None   E6D, V8I, K11S, V35T, T39I, V60I, D121Y, K122E, E138Q, Q174N, Q207A, R211K, F214FL, D250E, A272P, L283I, V292I, I293V, P313PS, G335D, F346Y, R356K, M357K, G359S, K366R, E370D, A371V, I375V, A376S, T377M, K385R, K390R, T403M, E404D, E432D, D471E, Q480H, L491S, S519N, Q524K, K527G, E529D, A534S, A554S  
10IR.THR09F 10IR.THR09F None None   V35T, T39A, V60I, D121H, K122E, I135R, D177E, V179I, T200I, Q207A, R211K, P243S, V245T, D250E, A272P, T286A, E291D, V292I, I293V, G335D, R356K, M357K, G359S, A371V, I375A, T377M, K390R, T403M, E404D, E432D, S468P, D471E, Q480H, L491S, S519N, Q524K, K527E, E529D, A534S, A554N, V559I  
10IR.THR41F 10IR.THR41F None None   E6D, V8I, K11R, V35T, V60I, D121Y, K122E, I135R, Q174H, D177E, V179I, Q207A, R211K, D250E, S251N, A272P, L283I, V292I, I293V, P321S, G335D, I341V, R356K, M357K, G359S, A371V, I375V, T377Q, K390R, E399D, T403M, E404D, S468P, D471E, Q480H, L491S, S519N, Q524K, I526V, K527E, E529D, A534S, A554N  
10IR.THR48F 10IR.THR48F None None   E6D, K11T, V35T, T39K, K122E, D123S, I135T, T139K, R172K, K173I, Q174K, D177E, I178M, V179I, Q207A, R211N, F214L, V245K, S251H, A272P, T286A, E291D, V292I, I293V, E312T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, E432D, N447S, Q464K, K465R, D471E, Q480H, L491S, I506L, K512R, L517V, S519N, Q524E, A534S, A554S Q182H 
11IR.KSH24F 11IR.KSH24F None None   E6D, V35T, V60I, D121Y, K122E, I135T, D177E, V179I, T200I, Q207D, R211K, V245M, D250E, A272P, I274V, E291D, I293V, P294T, I309L, K323R, G335D, R356K, M357K, G359S, T369A, A371V, I375V, A376T, T377M, K390R, A400T, T403M, E404D, E432D, D471E, Q480H, L491S, S519N, Q524K, K527E, E529D, A534S, A554N, V559I  
11IR.KSH29F 11IR.KSH29F None None   E6D, K11R, V35T, V60I, V90I, D121H, K122E, I135T, K166R, D177E, T200I, Q207D, R211K, V245M, D250E, A272P, E291D, V292I, I293V, I309L, G335GD, R356K, M357K, R358K, G359A, E370ED, A371L, I375V, A376T, T377M, K390R, T403M, E404D, E432D, D471E, Q480H, L491S, S519N, Q524EK, K527G, E529D, A534S, V536I, A554N, V559I  
11IR.KSH31F 11IR.KSH31F None None   E6D, V8I, V35T, V60I, D121Y, K122E, I135R, Q174H, D177E, V179I, T200I, Q207DG, R211K, K249Q, D250E, A272P, L283I, T286S, E291D, V292VI, I293V, I329IV, G335D, R356K, M357K, G359S, A371V, I375V, A376S, T377M, K390R, E404D, E432D, V435I, D471E, Q480H, L491S, S519SN, Q524N, E529D, A534S, A554N  
11IR.SYZ27F 11IR.SYZ27F None None   E6A, K11R, V35T, E40D, V60I, K122E, I142IT, D177E, V179I, V189VI, T200I, Q207A, R211K, V245M, D250E, A272P, I274V, K277R, T286A, E291D, V292I, I293V, E297A, I309L, D324E, A327V, R356K, M357K, G359S, A371V, I375A, A376T, T377M, K390R, T403M, E404D, E432D, L452Q, R461RK, V467I, S468T, D471E, Q480H, L491S, K512N, L517I, S519N, Q524K, I526V, K527G, E529D, V531I, A534S, A554N, V559I  
11IR.SYZ33F 11IR.SYZ33F None None   E6D, V35I, V60I, D121Y, K122E, I135T, I142V, K166R, D177E, V179I, T200I, Q207A, R211K, V245T, D250E, A272P, I274V, E291D, V292I, I293V, E297A, G335D, R356K, M357K, G359S, I375V, T377M, T386I, K390R, E399D, T403M, E404D, E432D, D471E, Q480H, L491S, K512N, L517I, S519N, Q520K, Q524K, K527G, E529D, A534S, A554S, V559I A371G 
11IR.SYZ38F 11IR.SYZ38F None None   E6D, V8I, K11R, I31L, V35T, T39A, I50T, V60I, D121Y, K122E, D123E, D177E, V179I, T200I, Q207A, R211K, D250E, A272P, K275R, E291D, V292I, I293V, G335D, R356K, M357K, G359S, E370D, A371V, I375V, A376T, T377M, T386I, K390R, T403M, E404D, E432D, D471E, Q480H, L491S, L517I, S519N, Q524K, I526V, K527E, E529D, A534S, A554N, V559I