<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Lihana (2009)
Title HIV type 1 subtype diversity and drug resistance among HIV type 1-infected Kenyan patients initiating antiretroviral therapy.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 51
NumPts 51
Subtype A, D, B, CRF02_AG, C, G

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
CCP-001 CCP-001 None None   P4S, V8X, V10X, V35T, D121Y, K122E, I135T, S162A, K173S, Q174K, D177E, V179I, Q207A, R211S D110G, V111C, D113G 
CCP-002 CCP-002 None None   V35T, D121Y, K122E, I135T, S162A, K173S, Q174K, D177E, V179I, Q207A, R211S, D218E  
CCP-003 CCP-003 None None   P1S, V35T, T39K, S48E, V60I, K122E, D123N, I135T, K173A, Q174K, D177E, V179I  
CCP-004 CCP-004 None None   P1S, V8I, V35T, T39A, E40D, K43R, V60I, K122E, D123S, I135V, D177E, G196E, T200K, Q207A, R211S  
CCP-005 CCP-005 None None   R78*, N81X, R83K, F87X, V90X, I94X, A98X, Y115X, K122E, D123H, K173S, Q174K, D177E, V179T, T200A, I202X, L205X, Q207A L100P 
CCP-006 CCP-006 None None   I2N, S3R, M16V, V35T, V60I, T107S, L109I, D121Y, K122E, K173S, Q174K, D177E, I178L, Q207A, R211S V10G 
CCP-007 CCP-007 None None   P4S, V8X, V10X, V35T, D121Y, K122E, I135T, S162A, K173S, Q174K, D177E, V179I, Q207A, R211S L12I 
CCP-009 CCP-009 None None   V35T, V60I, K122E, I135T, K173L, Q174K, D177E, I178L, V179I, Q207D  
CCP-011 CCP-011 None None   K11T, V21I, V35T, V60I, K122E, D123N, I135T, K173L, D177E, V179I, T200A, Q207A, R211S  
CCP-012 CCP-012 None None   K122E, I135T, K173L, Q174K, D177E, I178L, V179I, Q207D, W212X, K223R H221K, Q222R 
CCP-015 CCP-015 None None   K49R, V60I, K102R, K173T, Q174K, D177E, T200E, Q207E, R211K  
CCP-016 CCP-016 None None   V35T, T39A, K43R, V60I, K122E, D123S, I135V, D177E, G196E, T200A, Q207A, R211S  
CCP-019 CCP-019 None None   P4S, P14X, E28A, V35T, V60I, K122E, D123G, S162A, D177E, I178M, Q207E, R211X  
CCP-020 CCP-020 None None   V35T, V60I, D121H, K122E, I135T, D177E, T200A, Q207A  
CCP-023 CCP-023 None None   V35T, V60I, K122E, I135T, K173L, Q174K, D177E, I178L, V179I, Q207D  
CCP-030 CCP-030 None None   K122E, I135T, K173L, Q174K, D177E, I178L, V179I, Q207D, W212X, K223R H221K, Q222R 
CCP-031 CCP-031 None None   V35T, E36D, T39M, V60I, D123S, I135K, E138* V106E, L120F, D121W, Y127I 
CCP-032 CCP-032 None None   V35T, E40D, K49R, V60I, K122E, D123S, I135T, T139R, K173S, Q174K, D177E, V179I, T200A, Q207A, R211S, D218E  
CCP-033 CCP-033 None None   E6D, V35T, T58S, K102H, V118M, D121H, K122E, I135T, K173S, Q174K, D177E, I178M, V179I, M184X V111M 
CCP-034 CCP-034 None None   V35T, T39A, E40D, V60I, I135L, K173L, Q174K, D177E, V179I, T200E, Q207D  
CCP-035 CCP-035 None None   S3C, V35T, K49R, I50N, G51W, P52A, V60I, K102R, T131P, Q145X  
CCP-040 CCP-040 None None   V35T, T39A, E40D, V60I, D121H, K122E, I135T, K173S, Q174K, D177E, V179I, G196E, Q207A, R211S, F214L N57K, N81I 
CCP-045 CCP-045 None None   P1S, V35T, E36D, K43R, K49R, V60I, D123E, D177E, T200V, Q207G, R211K  
CCP-047 CCP-047 None None   P1S, P14S, V21A, V35T, E36D, A98S, D121Y, K122E, I135T, S162T, K173T, Q174K, D177E, T200A, I202V V60A, N81K, V148A, V189M 
CCP-048 CCP-048 None None   K11T, V21I, V35T, V60I, K122E, D123N, I135T, K173L, D177E, V179I, T200A, Q207A, R211S  
CCP-049 CCP-049 None None M184V Y181C P1S, K11T, V35T, K49R, K122E, D123S, I142T, A158S, T165K, K173S, Q174K, I178M, V179I, T200A, Q207A, L210X, R211S  
CCP-051 CCP-051 None None   V35T, E40D, K49R, P52A, V60I, D121Y, K122E, K173S, Q174K, D177E, V179I, Q207D, R211S  
CCP-055 CCP-055 None None K65R, T69~, T215P, K219R K101P, K103N P1S, L34I, V35T, K49R, V60I, S68G, V111I, K122E, D177E, I178M, V179M, Q207E, L210X, R211K, T216X E40S, M41I, G112S, I167M, Y183N 
CCP-056 CCP-056 None None   K22R, V35T, S48Q, V60I, V118I, K122E, D123N, I135T, K173S, Q174K, D177E, T200A, Q207A, R211S, F214L  
CCP-058 CCP-058 None None   V35T, E36Q, K49R, V60I, D121Y, K122E, D177E, I178M, T200I, E204N, Q207E, R211K  
CCP-059 CCP-059 None None   V35T, D121Y, K122E, I135T, S162A, K173S, Q174K, D177E, V179I  
CCP-060 CCP-060 None None   P1S, K11T, K20R, V35T, E40D, K49R, V60I, D121H, K122E, D123S, V179I, T200A  
CCP-062 CCP-062 None None   P1S, V35T, K49R, V60I, D121Y, K122E, R125K, I135L, I142V, S162C, D177E, Q207E, L210X, R211K  
CCP-064 CCP-064 None None   P1S, V21I, V35T, T39K, I50V, V60I, K122E, D123N, S162C, K173S, D177E, T200A, I202V, Q207A, L209X, L210I  
CCP-065 CCP-065 None None   P1S, V35I, K49R, V60I, D121Y, K122E, I135T, A158S, K173R, T200M, Q207E, L209X, L210I, R211K  
CCP-066 CCP-066 None None   V35T, V60I, D121H, K122E, D123S, K166R, F171Y, K173A, Q174K, D177E, V179I, T200E  
CCP-068 CCP-068 None None D67N, T69D, K70R, V75T, K219Q L100I, K103N K11S, V35T, V60I, K102R, D121H, K122E, D123S, I135T, T139K, I142V, K173L, Q174K, V179I, T200E, Q207A, L209X, L210I, R211S  
CCP-069 CCP-069 None None T215A  K49R, I50V, V60I, I142V, M164X, P170X, D177E, T200I, Q207G, R211K S117~, V118~, P119~, L120~, D121~, K122~, D123~, F124~, R125~, K126~, Y127~, T128~, A129~, F130~, T131~, I132~, P133~, S134~, I135~, N136~, N137Y 
CCP-070 CCP-070 None None   V35T, E40D, D121H, K122E, I135T, K173S, Q174K, D177E, V179I, T200A, Q207A, L209X, L210I, R211K  
CCP-071 CCP-071 None None   P1S, K11T, V35T, S48T, E53D, V60I, D121H, K122E, I135T, S162Y, K173L, Q174K, D177E, V179I, T200A, Q207A, R211S  
CCP-072 CCP-072 None None   E28A, V35T, V60I, K122E, D123S, I135T, S162G, K173A, Q174K, D177E, V179I, Q207A, R211S  
CCP-073 CCP-073 None None   E6D, V35T, K122E, D123N, I135T, S162Y, K173S, Q174K, D177E, V179I, T200A, Q207A, R211N  
CCP-075 CCP-075 None None T215P  P1S, V35T, E40D, K49R, V60I, K122E, D123E, E169D, D177E, Q207E, R211K, T216P  
CCP-076 CCP-076 None None   I2L, V35T, V60I, S68T, K122E, T139S, K173S, Q174K, D177E, I178M, Q207A, R211K  
CCP-077 CCP-077 None None   P1S, E6D, K11T, K20R, V35T, T39A, V60I, D121Y, K122E, D123G, I135T, I142V, S162C, K173A, Q174K, D177E, V179T, Q207A, R211S  
CCP-078 CCP-078 None None T215A  V35T, S48T, K49R, V60I, D121H, K122E, I135T, K173S, Q174K, D177E, T200A, Q207A, R211S  
CCP-079 CCP-079 None None   K20R, V35T, I37X, V60I, K122E, D123N, I135T, N147X, R172X, K173S, Q174K, D177E, I178M, Q207G, R211S, F214X V179~, V189M 
CCP-081 CCP-081 None None T215A K103N K20R, V35T, E36D, T39M, V60I, D121H, K122E, I135T, K173L, Q174K, V179I, T200A, Q207A, R211S, F214L  
CCP-085 CCP-085 None None M184L  T27S, V35T, V60I, D121H, K122E, D123S, I135T, T139K, K173S, Q174K, D177N, V179I  
CCP-086 CCP-086 None None   P1S, V35T, E40A, V60I, K122E, D177E, I178M  
CCP-087 CCP-087 None None   S3C, P14X, V35T, V60I, D121Y, K122E, I135T, K173S, Q174K, D177E, V179I, G196E, Q207A, R211S E29K