<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Xu (2008)
Title Genetic diversity of integrase (IN) sequences in antiretroviral treatment-naive and treatment-experienced HIV type 2 patients.
Citation ARHR
SelectedGene IN
SelectedSpecies HIV2
SelectedType Clinical
NumIsolates 11
NumPts 11
Host Human

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
1005731 1005731 None    T23S, I72V, I84V, P119A, I172V, T206A, F212Y, R215T, N219R, Y227F, E246D, I250L, D256E, V259I, V260I, I267V I18N, I19V, I28L, L30K, A41T, I58L, Y65C, S93T, E167D, Q224R, L277M, S280G, P281S, H282N 
1005732 1005732 None    L2I, T23S, L30T, V60T, P119A, S163N, I172V, F220L, Y227F, V260I K4R, I18N, I28L, A41T, I58L, Y65C, V133I, R215A, N219K, Q224R, L277M, H282N 
1007272 1007272 None    T23S, S39T, V60T, I72V, I84V, P119A, I172V, R215T, N219R, F220L, Y227F, E246D, I268V, R269K I18N, L30K, A41T, N55D, I58L, Y65C, S93T, E167D, Q224R, S280G, P281S 
1008260 1008260 None    L2I, L30Q, S39T, P119A, E246D K4R, I18N, I58L, Y65C, V133I, P281S 
1009629 1009629 None   S138T S39T, V60T, P119A, I172M, T206A, F220L, E246D, V260I I18N, T23A, I28L, L30K, A41T, I58L, Y65C, V133I, R215A, N219K, Q224R, S280G, P281S, H282N, A286D 
1009823 1009823 None    T23S, S39T, H51R, V60T, I72V, I84V, P119A, I172V, R215T, N219R, F220L, Y227F, D232G, E246D, I268V, R269K I18N, L30K, A41T, N55D, I58L, Y65C, K71T, S93T, I135M, E167D, Q224R, S280G, P281S 
1022838 1022838 None   S138T Y15F, L30Q, S39T, I50V, P90S, T206A, F220L, Y227F, E246D K4R, I18N, Y65C, P119S, V133I, R215A, N219K, Q224R, R287G 
1034429 1034429 None   S138T S17G, T23V, L30Q, V60T, P119A, S163D, I165L, I175V, S218L, N222T, D256E, D270H I18N, I19V, R34K, A41D, Q42K, I58L, Y65C, S93T, E125D, E167D, N170V, T171S, V180T, I201V, R215A, N219K, V251I, Q275K, P281A, H282D, L283M, G285D, A286T, E288Q 
1048808 1048808 None    T23S, S39T, V60T, P119A, S163D, I172V, F220L, Y227F, E246D K4R, I18N, I19V, I28L, L30N, R34K, N55D, E57A, I58V, Y65C, S93T, Q96H, V133I, R215A, N219K, Q224R, Q275K, L277M, H282N 
1048809 1048809 None    T23S, S39T, V60T, I72V, P119A, I172V, V180A, T206A, F220L, Y227F, E246D K4R, I18N, I19V, K20Q, I28L, L30K, I58V, Y65C, V133I, A197S, Q214H, R215A, N219K, Q224R, L277M 
115887 115887 None    T23S, S39T, V60T, P119A, I172V, F220L, Y227F, E246D, V260I I18N, I19V, L30N, I58L, Y65C, V133I, E167D, A197S, R215A, N219K, Q224R, L277M, S280G, P281S, A286T