Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author de Pina-Araujo (2014)
Title Profile of the HIV epidemic in Cape Verde: molecular epidemiology and drug resistance mutations among HIV-1 and HIV-2 infected patients from distinct islands of the archipelago.
Citation PLoS ONE
SelectedGene RT
SelectedSpecies HIV2
SelectedType Clinical
NumIsolates 30
NumPts 30
Host Human


Clinical RT Isolates

SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
CV.10.125 CV.10.125 None None   P7S, G15E, E39EG, T58S, P126Q, A158T, H162Y, R172K, I179IT, K249R, K277R I10V, M11MK, K176E, I251IK 
CV.10.162 CV.10.162 D4T, 3TC None   P126Q, K176Q, R200K, I251V M11V, K82KE, V167VI, L270I, R281K, M287ML 
CV.10.165 CV.10.165 None None   M11E, D86E, D123G, H162Y, R200K, H228R, I251X, I274IL, T276TI, K277R K4KR, I10V, K176P, L282M 
CV.10.167 CV.10.167 D4T, 3TC None   P51X, H162Y, K176X, R200K, H228Q, T237TN, I251IT, K277KR, R307RK V5I, V201A 
CV.10.168 CV.10.168 AZT, 3TC None   K64R, T107S, P126Q, H162Y, K176T, R200K, K277R V5I, I10V, I63F, W71L, E304A 
CV.10.173 CV.10.173 AZT, 3TC None   K35R, K82R, P126Q, V135T, A138S, I180L, K223R, H228R, R307K V5I, I10V, M11V, R22K, T58A, R104K, S134A, V167I, K176P, H198L, E250D, L270I 
CV.10.182 CV.10.182 None None E219D  K40KR, K64R, P126Q, V135T, H162Y, K176Q, K223R, H228Q, K249R, I251V, K277R, I283X V5I, M11L, V167I, L270I, M287L 
CV.10.188 CV.10.188 AZT, 3TC None   K64R, P126Q, K176Q, H228HR, I251IV, R307K, L325LS V2M, V5I, I8M, I10V, M11V, K147KE, V167VI, I179IV, N210NH, L270I, R281K, M287L, V293VI 
CV.10.190 CV.10.190 AZT, 3TC None S215SF  D123E, P126Q, I145M, H162Y, R200K, I251V L21Q, K40KN, E122K, R125Q, K176M, L203W, T216TS, E304A 
CV.10.199 CV.10.199 AZT, 3TC None N69G, M184MV L100I K20KR, K35T, E49R, K64R, D123K, P126Q, I180L, R200K, Y227X, H228X, I251V, K277R, H278N, R307K, H317X V5I, K9E, I10V, M11K, D17DN, I63IV, D113DN, T163M, V167I, K176P, L270I 
CV.10.200 CV.10.200 None None  Y318YF M11MI, K43KR, K64R, K82KR, D86E, P126Q, H162Y, K176X, H228Q, M230MI, T237TN, K249R, R307RK V5I, M41MR, P51PS, G112GR, W153W*, D195DE, V201A, K286KR 
CV.10.201 CV.10.201 Unknown Unknown   I31IT, T58S, D86E, A98S, P126Q, H162Y, K176X, I180IV, R200K, H228Q, K249KR, I251IT, K277KR I90V, V201VA, P226PS 
CV.10.211 CV.10.211 None None E219ED  D86E, P126Q, H162HY, K173KR, K176T, V201VI, I251V, K277R V5VI, K82E 
CV.10.219 CV.10.219 Unknown Unknown   K43KR, K64KR, P126Q, H162Y, T163X, R200K, L203Q, K223R, T237N, I251V V5VI, I10V, K176R, E250D, Q320R 
CV.10.282 CV.10.282 AZT None M184V  P126Q, V135T, K176Q, H228Q, I251V, R307K V5I, I10V, P51S, V167I, L270I, R281K 
CV.10.305 CV.10.305 Unknown Unknown A62V, E219D  K28R, T58S, K64R, K82R, D86E, P126Q, S134G, V135S, H162Y, K176Q, R200K, K223R, H228Q, I251V, R307K R22RK, V167I, V201A, L203M, V263VI, L270I, M287K 
CV.10.306 CV.10.306 AZT, 3TC None   M11T, P14A, K28R, K43R, K64R, K103R, H121Y, P126Q, E139EK, H162Y, K176L, I179T, H228R, I251V, R307K V5I, I10V, Y56F, V167I, R281K, M287L, H317C 
CV.10.318 CV.10.318 AZT, 3TC None E219D  H162F, K176Q, H228Q, K249R, I251V, R307K, L325LS I90V, E250D, L270I 
CV.11.108 CV.11.108 D4T, 3TC None   D123DG, P126Q, T131P, A138S, K176Q, K223R, H228K, R307K, K323E K4KE, V5I, M11V, R22K, H96R, L109S, D110N, F130L, L132I, P133H, V167I, L270I, R281K 
CV.11.109 CV.11.109 AZT, 3TC None  L188LF K64KR, A138S, K176X, R200K, L203Q, K249KR, I251IV V5I, I10V, P51S, I63V, V83VA, H228Y, K286R, Q320R 
CV.11.113 CV.11.113 None None   K35KR, P126Q, A138S, A158AT, H162HY, T163TI, K176Q, K223R, H228Q, I251V, R307K, K323E V5I, M11V, R22K, V167I, L270I 
CV.11.231 CV.11.231 Unknown Unknown  Y318F K28R, T88S, P126Q, H162Y, K173N, R200RK, I251T L12LV, E42EK, V83A, A138I, L203C, E250D, V263I, M287L, T288A, Y319YS 
CV.11.234 CV.11.234 Unknown Unknown   M11T, K64R, K103R, T107S, V111I, E122*, D123R, V135T, H162Y, A174T, I179T, G211N, H228Q, T237N, K243KR, I251V, K277R, R284K, E300X, I308IV I10V, R22K, P51PT, R104K, P126K, L132I, Q166H, V167I, K176P, V263I, L270I, M287L, E313ED, H317C, E322D 
CV.11.236 CV.11.236 None None E219D  M11T, K28R, K82R, D86E, P126Q, H162HY, K176T, R200K, H228Q, T237N, Y271YF V5I, I10V, R22K, V201A, R281K, Q320R, E322D 
CV.11.253 CV.11.253 None None   K64R, N69S, T107S, P126Q, H162Y, I180L, P225PS, H228R, I251V, R307K V135I, V167I, K176P, I179V, T237TS, L270I, R281K, H317C 
CV.11.268 CV.11.268 None None   K28KR, D123G, P126Q, K176Q, I179IT, R200K, D218E, H228Q, I251V, R307K, I308V, E322EG V5I, I8M, W239WL, L270I, R281K 
CV.11.277 CV.11.277 Unknown Unknown   K28R, K43R, P126Q, H162Y, I180L, H228Q, K249R, I251V, H278N, R307K V5I, S134A, V167I, K176P, L270I, M287L, T288A 
CV.11.301 CV.11.301 AZT EFV Q151M, M184V  H162Y, K176Q, I251V, R307K I10V, M11V, E250D, R281K 
CV.11.322 CV.11.322 None None   M11T, P14T, K43R, P126Q, H162Y, R172RK, H228R, I251V, R307K V5I, I10V, Y56F, V167I, K176P, M287L, V293I, H317C 
CV.11.332 CV.11.332 D4T, 3TC None Q151M, M184V  T27S, K64R, P126Q, K176Q, F214L, F221L, H228R, K277R V5I, I10V, M11V, H121D, E122K, V167I, L203M, L270I, M287L, V293I