<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Youngpairoj (2014)
Title Reference panel of cloned HIV-2 plasmid DNA for nucleic acid assay development, evaluation, and quality monitoring.
Citation J Clin Virol
SelectedGene RT
SelectedSpecies HIV2
SelectedType Clinical
NumIsolates 11
NumPts 11
Host Human

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
310072 310072 None None   I5V, T11E, L21I, K22R, T27S, K28R, K64R, K66R, K102E, K104R, E122P, D123N, M138A, E169D, P176S, G211D, L212M, D218E, Q228K, K249R, D250E, Y271F, S272P, K277R, L279I, E304Q, S311E, Y317S, E322G, E324P, I329V, G334A, H335N, E344G, K347R, I357V, E399D, N404D, V423I, I434L, P435E, F440Y, R448K, K492Q, N519T, Q520R, V531I, I542L I8V, E32L, I63V, F87V, I90V, S107T, I108V, H121D, A134S, V135I, T163S, Q166K, L180I, T194S, G195D, L203S, C232Y, T237K, L244I, Q248E, I270L, R281K, Q320K, K323I, S332N, Q333L, Q370H, R385E, K388V, D403T, T426A, F427Y, G431K, A437R, Q449T, V468M, V481A, R483A, M484L, A487Q, V506I, G508A, S513T, N515S, R516P, E523K, A534G 
310319 310319 None None   K4S, P14E, L21I, K22R, T27S, E32Q, T58S, K66R, D86E, E122P, M138A, E169D, P176S, I179T, G211N, L212M, D218E, D250E, I251V, Y271F, S272P, K277R, L279I, S311E, Y317S, E322G, E324P, I329V, G334A, H335N, E344G, I357V, I386V, K388I, E399D, N404D, V423I, I434L, P435E, A437V, F440Y, V468P, K492Q, Q520T, V531I, I542L, V559I I8V, T11K, R20K, F61L, I90V, K102S, S107T, I108V, H121D, A134S, I145L, T163S, R165G, Q166K, L180I, I189V, T194S, G195D, L203S, C232Y, T237K, L244I, Q248E, I270L, Q320K, K323V, S332N, Q333L, E345D, Q370H, R385E, D403T, T426A, F427Y, G431K, Q449T, V481A, R483A, M484L, A487Q, V506I, G508A, S513T, N515S, R516P, N519K, A534G 
60415K 60415K None None E219D  I5V, V10I, T11M, K22R, K64R, K104R, M138S, P176T, K200R, F227Y, Q228H, I251A, S272P, E297D, I329V, G334S, H335N, I341V, E344G, I357V, E413D, A437T, V531I, V559I R20K, E48G, S107T, I108V, Q126P, A134S, L180I, G195D, C232Y, L244I, I270L, M287L, Y317H, S332D, E345D, T426A, K463R, V481A, R483A, A487T 
7312A 7312A None None   T11Q, L21I, K22R, T27S, K35R, D86E, K102E, K104R, L109I, E122P, M138A, E169D, K173R, I179T, G211D, L212M, D218E, L246I, K249R, D250E, I251V, Y271F, S272P, K277R, L279I, R284K, L303M, E304Q, Y317S, E322G, E324P, I329V, G334A, H335N, E344G, I357V, R385Q, E399D, N404D, I434L, P435E, G436K, A437V, F440Y, V468P, K492Q, Q520K, V531I, I542L I8V, R20K, E32L, P51S, I90V, S107T, I108V, I118V, H121D, A134S, V135I, T163S, Q166K, P176N, L180I, I189V, T194S, G195D, L203S, C232Y, T237K, L244I, Q248E, I270L, S311G, Q320K, K323V, S332N, Q333L, E345D, I348V, L367I, Q370H, K388M, D403T, T426A, F427Y, V430I, G431K, Q449T, K463R, V481A, R483A, M484L, A487Q, S513T, N515S, R516P, A534G 
77618 77618 None None   D17E, E39K, K64R, M138A, D250E, S272P, G334D, H335N, A437T, G508S, R516K, E524D S107T, I108V, A134S, C232Y, Y317H, K463R, V481A, R483A, N515S, I526T 
7924A 7924A None None E219D  V10I, T11M, K22R, K64R, K104R, M138A, P176Q, K200R, F227Y, Q228H, D250E, I251T, S272P, I329V, G334D, H335N, I341V, E344G, I357V, T397V, E413D, F440Y, V458I, V493A, V531I R20K, S107T, I108V, A134S, V167I, L180I, G195D, V201A, C232Y, E233K, L244I, R281K, M287L, T288A, K307R, Y317H, E322D, S332D, T426A, G431K, K463R, V481A, R483A, A487T 
A1958 A1958 None None   I5V, K22R, K28R, T58S, K64R, K104R, M138A, Y162F, P176Q, K200R, F227Y, D250E, S272P, E304Q, G334D, H335N, E344G, I357V, V372I, N404D, E413D, G436D, A437V, K451R, V458I, A477S, R516K, V531I V2I, R20K, E49I, P51S, Y56F, S107T, I108V, A134S, T163M, V167I, L180I, G195D, C232Y, L244I, I270L, R281K, M287L, Y317C, S332D, T426A, G431K, K463R, K467R, V481A, R483A, L486V, A487T, N515S 
A2270 A2270 None None   V10I, T11M, K22R, K64R, K104R, V111I, M138A, K173R, F227Y, Q228R, D250E, I251V, S272P, E297D, I329V, G334D, H335N, I341V, E344G, K353R, I357V, N404D, E413D, A437T, V458I, V493A, V531I R20K, P51S, S107T, I108V, V167I, L180I, G195D, C232Y, W235R, L244I, V293I, Y317H, E322D, S332D, T426A, G431K, K463R, E480Q, V481A, R483A, A487T, I496V, N515S 
GB122 GB122 None None   T11M, K22R, K64R, K104R, M138A, P176Q, K200R, F227Y, Q228R, D250E, I251V, S272P, Q294L, K323R, I329V, G334D, H335N, E344G, I357V, E413D, A437T, V458I, R516K R20K, Y56F, S107T, I108V, A134S, Q166H, V167I, L180I, G195D, C232Y, L244I, M287L, K307R, Y317H, E322D, E324D, S332D, T426A, G431K, K463R, K467R, V481A, R483A, A487T, N515S, V531L 
GB87 GB87 None None  I181V K22R, K43R, K104R, H121C, M138A, K200R, F227Y, Q228R, D250E, I251V, S272P, I329V, Q330H, G334D, H335N, E344G, N404D, E413D, G431R, P435L, V458I, D464N, V493A, R516K, I517M, K528R, V531I V2I, R20K, S107T, I108V, A134S, V167I, G195D, C232Y, L244I, Y317H, S332D, K358R, T426A, K463R, V468M, V481A, R483A, L486I, A487T, V506I, N515S 
SLRHC SLRHC None None   E6Q, T11M, K22R, K43R, D86E, K104R, V111I, M138A, K200R, F227Y, D250E, S272P, K277R, I329V, G334D, H335N, E344G, I357V, E413D, V458I, V468I, V493A, E524G, V531I R20K, L47I, P51S, S107T, I108V, S117F, A134S, V167I, G195D, C232Y, L244I, Y317C, S332D, T426A, G431K, K463R, K467R, T472I, V481A, R483A, L486I, A487T, N515S