Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Martin (2014)
Title Early immune adaptation in HIV-1 revealed by population-level approaches.
Citation Retrovirology
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 126
NumPts 126
Subtype B

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 126 Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
ACU1 ACU1 None    M50I, I72IV, I113V, T124NS, T125TA, L234I, D256E, A265V  
ACU102 ACU102 None    E11D, K14R, A21T, L101I, I113V, S119T, T125TA  
ACU103 ACU103 None    T112L, K173R, V201I, T218I, I220V, S283G D3N, E170K 
ACU104 ACU104 None    S39C, S119P, T124N, G193E, V201I, T218S, D232E  
ACU105 ACU105 Unknown    E11D, A21T, K42R, L101I, I113V, S119T, T125A  
ACU106 ACU106 None    S17N, L101I, T122I, T124A, K127T, K173R, A265V, S283G  
ACU107 ACU107 None    E11D, V31I, S119P, T122I, S195T, D256E  
ACU108 ACU108 None    E11D, S24N, M50I, T124N, V201I, T206S, I208L, D288N  
ACU109 ACU109 None    S17SN, L28LI, V201I, I208L, D256E  
ACU11 ACU11 None    D6E, E10D, E11D, D25E, V31I, L101I, K111R, T124A, G193D, S195T, V201I, A265V, K273Q, D278A, D286N, D288N  
ACU110 ACU110 None    E11D, S39C, I72V, L101I, T122I, V201I, K215N, Q216K, I220L  
ACU111 ACU111 None    V31I, L45Q, I72V, K111E, I113V, T125A, V201I, D207N, L234I  
ACU112 ACU112 None    E10A, E11D, V31I, V32I, V37I, S39C, L101I, T112A, S119G, T122I, T125A, V201I, K240R, R284G  
ACU13 ACU13 None    E11D, T122I, M154L, D167E, V201I, S283G  
ACU14 ACU14 None    V31I, I72V, L101I, K111T, S119P  
ACU15 ACU15 None    T112V, I135V, F181L, V201I, T206S, D256E, I268L, D270H, R284G  
ACU18 ACU18 None    S17N, I72V, T125I, K156N E287K 
ACU19 ACU19 Unknown    E11D, A21T, M50I, L101I, K136N, T206S V110VL 
ACU2 ACU2 None    K7R, E11D, S24N, V31I, L101I, K111T, T122I, I135V, V281M  
ACU20 ACU20 None    S17N, V31I, S39C, I72V, L101I, T124A, K156N, D167E, D253E  
ACU23 ACU23 Unknown    E11D, S24G, D25E, L45V, L101I, S119P, T122I, D256E  
ACU24 ACU24 None    E10D, S24D, L45Q, M50T, I72V, A91T, L101I, S119P, T122I, T124A  
ACU25 ACU25 Unknown   T97A D6E, S17N, M50V, I72V, L101I, T124N, I135V, I220M, D253E, D256E  
ACU26 ACU26 None    R20K, M22I, A23V, I72V, P90S, L101I, K111R, T112S, H171Q, D232E, D256E, S283N  
ACU27 ACU27 None    S17N, L101I, T125V, G163E, I220V  
ACU28 ACU28 None    I72V, T124A, A265V  
ACU3 ACU3 None    I72V, I113V, T124A, T125M, M154MI, V201I  
ACU30 ACU30 None    E11D, V31I, L101I, K111T, T122I, A265V  
ACU31 ACU31 None    L101I, S119G, T122I, V201I, C280S  
ACU32 ACU32 None    E11D, S17N, L28I, V31I, S39C, M50I, I60V, I72V, A91G, L101I, K156N, V165I, S230N  
ACU33 ACU33 None    D6E, E11D, S17N, L101I, K111T, T125A, S230N, D232E, K244E, D253E  
ACU34 ACU34 Unknown    S17C, I72V, T125A, R231K  
ACU35 ACU35 None    V31VIM, L101I, K156N, G193R, T206S  
ACU38 ACU38 None    K111R, I113V, T124N, T125A, K156KN, R187K, V201VI, K211R, N254NK, V281M  
ACU39 ACU39 None    L101I, S119T, T124Q, G193E, S283G, D288N  
ACU4 ACU4 None    K7R, E11D, V31I, L101I, K111T, T122I, V281M, D286N  
ACU40 ACU40 None    K111T, T124A, D256E  
ACU43 ACU43 None    I60V, T112I, I113V, S119T, T124N, T125V, T218S, M275V, S283G  
ACU45 ACU45 None    V31I, M50T, I72V, T124A, G193E, V201I, I203M, I208L, D288N  
ACU46 ACU46 None    V31I, I60M, I72V, V79A, S119P, V201I, T206S, K219N, D288N  
ACU47 ACU47 None    E11D, V31I, L101I, S119P, T122I, G193E, V201I, D256E  
ACU48 ACU48 None    D6E, K7R, T124N, T125V, D256E  
ACU49 ACU49 Unknown    L101I, S119T, T124Q, T125M, G193E, S283G, D288N  
ACU5 ACU5 Unknown   V54I D6E, E11D, S17N, A49P, I72V, K111Q, T124N, K211R, T218S  
ACU50 ACU50 Unknown    I72V, I113V, T125A, V126F, I203M  
ACU51 ACU51 None    L101I, T124N, G193GE, I200L, V201I, Q216H, N222H, S230N, R231K, K240R, V281M  
ACU52 ACU52 Unknown    L101I, T112A, T122I, T125A, G193R, V201I, K211R, T218S, K219N, L234I  
ACU53 ACU53 None    E10D, E35Q, S39N, L45V, L101I, S119G, T122I, K136T  
ACU54 ACU54 None    E11D, E13D, V31I, S57N, I60V, I72V, L74I, I89M, S119P, T122I, T124A, S195T, V201I, I203IM, S283SG  
ACU55 ACU55 None    I72V, K111Q, T112V, I113V, T124N, K211R, S283G  
ACU56 ACU56 None    D6E, S39G, M50I, L74I, K111T, S119P, H171Q, D288N  
ACU57 ACU57 None    E11D, A23V, N27G, V31I, L101I, S119G, T122I, T124A, G193E, V201I, I203M, D278S  
ACU58 ACU58 None    E10A, K14R, R20K, S39C, M50I, G193E, V201I, D232E  
ACU59 ACU59 Unknown    E10V, S119P, T122I, T124N, T125A, I135V, G163E, I182V, D256E  
ACU6 ACU6 Unknown    V31I, I72V, P90S, L101I, K111Q, T124A, I135V, F181L, I203M  
ACU60 ACU60 None    E11D, E13D, V31I, S57N, I60V, S119P, T122I, S195T, V201I, S230N, D256E  
ACU61 ACU61 None    L74V, L101I, K111Q, T112I, T125A, D167E, K173R, I208L  
ACU62 ACU62 Unknown    L101I, T122I, T124N, K156N, D207E, L234I, D256E, D279G  
ACU64 ACU64 None   A128T E11D, E13D, V31I, S57N, I60V, L74I, S119P, T122I, S195T, V201I  
ACU65 ACU65 None   A128T S24G, L45V, T112I, K156N  
ACU66 ACU66 None    E11D, S24N, T112V, T124N, T125V, V201I  
ACU67 ACU67 None    T112I, T124N, I182V, V201I, D256DE  
ACU68 ACU68 None    S17N, S24G, G106A, T112A, I113V, T124A, T125A, G163E, I208IL, L234V, D256E  
ACU69 ACU69 None    L101I, T124A, A175T, G193E, V201I, I220L  
ACU7 ACU7 None    E11D, S17T, M22I, A23V, V31I, V37I, M50I, L101I, G163E, D167E, V201I, T206S  
ACU70 ACU70 None    E11D, N27G, V31I, V32VI, L101I, S119G, T122I, T124A, G193E, V201I, D278S  
ACU71 ACU71 None    I72V, I113V, T124A, T125A, I203M  
ACU74 ACU74 None    E11D, S24N, V31I, I113V, T124N, G193D, T206S, D288N  
ACU75 ACU75 None    L28I, L45V, M50I, G163E, D286N  
ACU78 ACU78 Unknown    V31I, L101I, A133T, V201I, T206S, A265V, R269K, S283G  
ACU8 ACU8 None    E11D, I113V, T124A, G193E, S195T, A196P, E287A  
ACU80 ACU80 Unknown    E11D, E13D, L101I, T124A, K136N, K156N, E157Q, G193E, T206S, I208L, D232E, D256E, D278A  
ACU81 ACU81 Unknown    K14R, S17N, K34KR, L101I, T124A, T125A, K156N, D167E, V201I, I208L, S230N, N254K  
ACU82 ACU82 Unknown    E11D, K14R, N18D, R20K, A21T, V37I, L101I, S119SG, T122I, T124A, T125A, D167E, S195C, E198D, Y227F, D253H, D278A, S283G  
ACU83 ACU83 None    E11D, L101I, K111T, T112A, S119P, T124N, T125A, I135V, G193R, T218S, V260I I161IS 
ACU84 ACU84 None    E11D, L101I, T112V, I113V, S119P, T122I, G193E, I208L, D288N  
ACU85 ACU85 Unknown    S17N, I72V, T112I, I113V, T124A, T125A, T206S  
ACU86 ACU86 None    K7R, V31I, L101I, G163E, T206S, D232E  
ACU87 ACU87 None    S39M, I72V, S119P, T122I, K156N, V201I, T206S, K219N, L234I  
ACU88 ACU88 Unknown    I72V, K111T, I113V, T125V, H171Q, I208M  
ACU89 ACU89 Unknown    E11D, K14R, S17T, L101I, T124A, G163E, G193E, V201I, I208L, E212A, S230N  
ACU9 ACU9 None    D6DE, E11ED, S17N, L45LV, M50MT, I72IV, T124TA, T125TA, V126VL, I135IV, G163GE  
ACU90 ACU90 Unknown    L45V, M50I, G163E, D286N  
ACU91 ACU91 Unknown    E11D, S17T, A23V, T122I, T124N, D256E  
ACU92 ACU92 Unknown    E10D, L101I, T124S, K156N, V201I, I208L, N254Q, D256E  
ACU93 ACU93 None    K7R, K111T, V201I, I208L, E212A, D232E  
ACU94 ACU94 None    K7R, S17N, L74I, A91E, T112V, I113V, S119R, T124A, K173R, I208L, E212A, I220L, Y227F, D256E  
ACU96 ACU96 None   V151VI S17N, V31I, L101I, K136N, G163E, K188R, S230N, S283G  
ACU97 ACU97 Unknown    E10D, E11D, V31I, S119P, T122I, S195T, T218I, D256E T124TADN 
ACU99 ACU99 Unknown    K111T, T122I, K188R, V201I, I220L, Y227F  
CHR10 CHR10 None    E10D, E11D, V31I, V32I, S39C, L101I, S119P, T122I, V201I, K215N, K240R, S255G  
CHR11 CHR11 None   V54I M50I, L74I, S119P, K173R, V201I, I208M K127S 
CHR12 CHR12 None    E11D, L28I, V37I, S39C, L101I, S119T, T124N, T125M, I135IV, K156N, V201I, I208L, S230N  
CHR2 CHR2 None    E11D, S17T, M22MI, L28LM, V32I, S39R, L63LIV, I72V, L74I, I89L, K111KT, S119G, T124N, K173R, V176L, L234LI, D256E  
CHR3 CHR3 None    S17N, L101I, T124N, T125A, V126LM, S230N, L234I, D256E  
CHR4 CHR4 None    E11D, A21T, I72V, L101I, S119P, D167DE, V201I, A265V A179S 
CHR5 CHR5 None   L74LM K7KQ, R20RK, S24SN, N27G, T124N, T125TA, M154I, V201I, L234I  
CHR6 CHR6 None    L45Q, I72V, K111KR, E157Q, K160T, V176VI, D256DE  
CHR7 CHR7 None    E10D, E11D, A23V, M50I, V201I, K211R, A265AV, S283SG  
CHR9 CHR9 None    L45V, I72V, L101I, T124A, I135V, V150VA, F181L, V201I, K211Q, D270N, R284RG