<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Fokam (2016)
Title Population-based surveillance of HIV-1 drug resistance in Cameroonian adults initiating antiretroviral therapy according to the World Health Organization guidelines.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 53
NumPts 53
Subtype CRF02_AG, A, G, F, D, CRF09_cpx, CRF13_cpx, CRF18_cpx

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
CIRCB-01AH CIRCB-01AH None None   K11T, V35T, T39DEKN, D123N, I142V, K173I, Q174K, D177E, Q207ADNT, R211K, V245I, L283I, I293V, P294T, I326V, Q334QH, G335D  
CIRCB-02AH CIRCB-02AH None None T69TADN  V35T, V60I, D123E, I135L, S162A, K173A, Q174K, D177E, I178M, T200A, Q207E, R211K, V245Q, E248D, A272P, K281KR, R284RK, T286A, E291A, V292VI, I293V, P294T, S322ST, I326V, Q334QK, G335D  
CIRCB-03AH CIRCB-03AH None None   I5V, E6D, V35T, E36D, T39NS, K122E, D123S, I135V, S162A, K173AV, Q174K, D177E, I180V, T200A, Q207DE, R211K, V245Q, E248D, T286A, E291D, V292I, I293V, P294T, S322A, I326IV, G335D  
CIRCB-04AH CIRCB-04AH None None   V60I, S68G, T69TN, K82KR, D123N, I142V, S162A, K173AT, Q174EGKR, D177E, I178L, Q207A, R211K, P243T, V245Q, E248D, D250S, A272P, K275R, Q278H, K281R, T286A, E291D, I293V, E297T, H315HQ, D324DE, E328EK, I329L, G335D  
CIRCB-05AH CIRCB-05AH None None   K11T, V35T, E36D, T39TA, D121H, K122E, D123S, I135T, S162C, E169D, K173A, Q174K, D177E, E194EK, G196E, T200A, E203D, E204ED, R206RK, Q207A, R211RKNS, V245Q, E248D, D250EQ, A272AP, K275Q, T286A, E291D, I293V, E297R, E300EK, E312D, L325I, I326V, K331N, G335D R284RG 
CIRCB-06AH CIRCB-06AH None None   V35T, E36D, K104KR, K122E, D123DG, I135V, S162A, K173T, Q174QKR, D177E, I178IM, T200A, Q207G, R211RK, V245Q, K275R, K277R, T286A, E291D, V292I, I293V, V317A, S322A, I326V, G335D  
CIRCB-07AH CIRCB-07AH None None   K20R, V35T, T39IM, V60I, K122E, D123S, S162A, K173T, Q174K, D177DE, T200A, Q207A, R211K, V245Q, A272G, T286A, E291D, V292I, I293V, P294T, K311KR, S322A  
CIRCB-08AH CIRCB-08AH None None   P4H, K11T, V35T, T39L, A98S, D121H, K122E, D123S, I135T, S162C, E169D, Q174K, D177E, I178IM, G196E, T200A, Q207A, R211S, D218DN, E224D, V245K, T286A, I293V, E297R, E312D, S322ST, I326IT, G335D  
CIRCB-09AH CIRCB-09AH None None   V35T, E36ED, T39K, K43KE, V60I, I135V, S162A, K173T, Q174N, D177E, T200A, Q207E, R211K, V245Q, T286A, E291ED, I293V, P294PA, L310LI, S322T, I326V  
CIRCB-10AH CIRCB-10AH None None   V35T, T39LS, S48T, V60VI, S68SR, K122E, D123G, S162A, K173I, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248N, K277T, T286A, E291ED, I293V, T296TS, S322T, I326IV, G335D  
CIRCB-11AH CIRCB-11AH None None   K20R, V35T, E36D, T39KR, I135T, S162A, K173T, Q174E, D177E, T200A, E204K, Q207E, F214L, V245Q, P247PA, T286A, A288G, E291D, I293V, P294IT, E297K, S322A, I326V, G335D  
CIRCB-12AH CIRCB-12AH None None   V35T, E36D, K122A, I135T, S162A, K173S, D177E, I178L, D192N, T200A, R211K, F214L, V245Q, A272P, K281R, R284K, T286A, E291D, V292I, I293V, P294T, E300EK, E308EK, E312EK, S322T E305EK 
CIRCB-14AH CIRCB-14AH None None   V35T, K43KQ, K49KR, V60I, K102Q, K122E, D123S, D177E, I178M, T200A, Q207N, R211K, V245Q, K277KR, K281KR, T286A, E291D, V292I, I293V, E297A, E308EK, E312EK R284RG, E305EK 
CIRCB-150AH CIRCB-150AH None None   V35T, E36D, T39L, K43R, K104R, K122E, D123DG, S162A, K173T, Q174K, D177E, I178IM, E194EK, T200A, Q207E, R211K, V245EK, E248D, A272P, T286A, E291D, V292I, I293V, P294T, L303LW, R307RK, I309IF, S322A, G335D R284RG 
CIRCB-151AH CIRCB-151AH None None   V35T, T39L, V60I, V90VI, I135V, S162A, Q174E, D177E, T200A, Q207E, R211K, F214L, V245Q, A272P, T286A, I293V, P294A, S322A, G335D  
CIRCB-152AH CIRCB-152AH None None   K11T, V35T, T39N, E40D, I135V, S162C, K173A, T200A, Q207N, R211K, V245Q, A272P, K281R, T286A, I293V, E297K, E312D, I326V, G335D  
CIRCB-153AH CIRCB-153AH None None   V35T, K43N, K122P, I135V, S162A, R172RK, K173T, Q174K, D177E, I178L, D192DN, E194EK, T200A, R206RK, Q207E, W212WG, V245Q, T286A, E291D, V292I, I293V, P294T, S322T, I326V, G335D  
CIRCB-17AH CIRCB-17AH None None   V35T, T39K, K49R, I50V, V60I, S68G, V106I, D123E, I135T, S162C, R172K, K173R, D177E, I178L, T200A, Q207EG, R211K, F214L, V245T, D250E, A272P, K277R, T286A, I293V, E297X, E308EK P25PS, E204NS 
CIRCB-18AH CIRCB-18AH None None   V21I, K32I, V35T, T39K, K49KR, V60I, K122E, F171Y, K173S, D177E, G196E, Q207D, V245M, D250E, A272P, T286A, I293V, E297R, E312D, Q334QR D121DCGY 
CIRCB-20AH CIRCB-20AH None None   I5V, K22X, T27S, V35T, T39A, E40D, K49KR, K104R, K122E, D123DG, T165I, K173T, D177E, T200E, I202V, R211K, F214L, V245Q, T286AP, E291D, V292I, I293V, P294T, E300EQ, K311R, S322A A33L 
CIRCB-21AH CIRCB-21AH None None   V35T, V60I, K122P, I135V, F171Y, K173A, Q174K, D177DE, Q207E, R211K, P243A, V245K, A272P, V276T, L283I, E291EK, V292I, I293V, E297T, E312T, S322A, E328EK  
CIRCB-23AH CIRCB-23AH None None   V21I, V35T, T39K, E40D, K49KR, I50IV, V60I, K104R, D121Y, K122E, K173T, Q174K, D177E, T200TA, Q207K, R211E, V245Q, E248D, D250E, A272P, I274V, Q278H, T286A, E291D, V292I, I293V, E297A, L301M, D324E, I326M, A327V, I329V, Q334M, G335D  
CIRCB-24AH CIRCB-24AH None None   V21I, V35T, T39K, K43E, D121H, K122E, I142V, E169D, K173R, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248D, D250E, S251D, A272P, K277GR, R284RK, T286A, E291D, V292I, I293V, E300EK, D324E, E328EK, G335D E305EK 
CIRCB-27AH CIRCB-27AH None None   V35T, E40ED, S48T, V60I, A98S, K122E, D123E, S162A, Q174A, D177E, G196R, T200E, Q207E, V245Q, E248D, D250E, A272P, T286A, E291D, V292I, I293V, P294PQ, E297A, D324E, I329V, G335D  
CIRCB-28AH CIRCB-28AH None None   V35T, T39L, V60I, D123E, I135V, S162A, K173T, Q174E, D177E, T200A, Q207EK, R211K, P243PS, V245Q, V261VG, A272P, K277KR, T286A, E291D, V292I, I293V, P294A, S322T, I326V, Q334QR, G335D  
CIRCB-29AH CIRCB-29AH None None   V60I, K122E, D123N, I135L, S162A, K173T, Q174E, D177E, T200A, Q207K, R211A, V245H, A272P, K277R, T286A, E291DN, V292IM, P294T, E300EK, R307RK, E308EK, E312EK I293EV, E302EK, E305EK 
CIRCB-30AH CIRCB-30AH None None   V35T, K49R, V118I, D123DE, I135T, R172K, K173N, D177E, I178L, V179I, T200TA, Q207E, R211K, F214L, V245K, D250E, A272P, T286A, E297KR, I329V, Q334DE, G335S, T338S, Y339W Q182S 
CIRCB-31AH CIRCB-31AH None None   E6K, V8I, K32R, V35T, E36D, T39TA, K43R, V60VI, K104R, K122E, I132IV, S162A, K173T, D177E, T200A, E204ED, Q207ADE, R211K, V245Q, E248ED, K275Q, K277R, T286A, E291D, V292VI, I293V, P294T, E297R, S322T, Q334E  
CIRCB-32AH CIRCB-32AH None None   E6EK, V35T, E36D, T39L, K43KR, K104R, K122E, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, D218DN, V245Q, E248EDKN, D250DN, T286A, I293V, P294T, S322A, G335D  
CIRCB-33AH CIRCB-33AH None None   V35T, T39TILS, I132V, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211K, F214L, V245Q, V276I, L283I, E291D, V292I, I293V, P294T, S322T, E328D, G335D  
CIRCB-34AH CIRCB-34AH None None   E6Q, T7P, P9A, K11R, D17E, V35T, D121H, K122E, I135V, S162A, K173T, Q174AEKT, D177E, T200A, R206RK, Q207E, R211K, E224EK, Q242QH, V245Q, K277R, T286A, E291D, V292I, I293V, P294T, E297ED, S322T, I326V V10E, M16R, W239WG, Q258QH 
CIRCB-35AH CIRCB-35AH None None   V35T, T39M, K122E, D123NS, I142IMT, S162A, K173T, D177E, I178M, T200A, Q207A, R211K, P243A, V245Q, A272P, V276VI, K277R, T286A, E291D, V292I, I293V, S322T, I326V, G335D  
CIRCB-36AH CIRCB-36AH None None   V35T, E36D, E40D, K49R, E53X, V60I, I135V, S162A, K173T, Q174QK, D177E, G196E, T200A, Q207E, R211RK, M230MR, Q242QH, V245Q, E248DN, D250DN, V261VG, Q278QH, T286A W239WG 
CIRCB-37AH CIRCB-37AH None None  K238T V35T, E36D, T39M, V90I, S162A, K173T, Q174K, D177DE, T200A, Q207E, R211K, D218DN, V245K, K275KR, T286A, E291D, V292I, I293V, P294T, K311KR, S322A, G335D  
CIRCB-39AH CIRCB-39AH None None   I5V, E6D, E28A, V35T, E36D, T39L, K122E, D123S, I135T, S162A, K173T, Q174E, D177E, I178MV, T200A, Q207E, R211K, V245Q, K275KQ, V276VI, T286A, E291D, V292I, I293V, P294PILT, S322A, A327V, I329V, G335D  
CIRCB-40AH CIRCB-40AH None None   V35T, E36ED, T39L, K122R, D123E, I142IV, S162A, Q174N, D177E, T200A, Q207E, R211K, V245Q, D256DE, A272P, K281R, T286A, E291D, V292I, I293V, S322E, D324E, I326IV  
CIRCB-41AH CIRCB-41AH None None   V35T, E36D, K122P, I135IV, S162A, K166KR, K173T, Q174R, D177E, I178L, T200A, Q207DE, R211K, V245Q, S251I, A272P, K275Q, K277R, T286A, E291D, V292I, I293V, P294T, L295M, P321S, S322T, G335D T253N 
CIRCB-42AH CIRCB-42AH None None   E6D, K11T, V35T, D123N, S162A, K173V, D177E, T200A, Q207EK, R211K, V245Q, A272P, K277R, T286A, E291D, V292I, I293V, E297ED, R307RK, S322AT, Q330QH, G335D, Q343QH E308E*, L310L*, A327LV, E328EQ 
CIRCB-43AH CIRCB-43AH None None   V35T, V60I, K122E, D123DN, I135V, S162A, F171Y, Q174A, D177E, I178V, G196E, T200A, Q207K, R211T, F214L, V245Q, T286A, E291D, V292I, I293V, P294T, S322AT, I326V, I329IV, Q334QDEH, G335GD  
CIRCB-44AH CIRCB-44AH None None   E6EK, V35ILPT, E36D, T39A, V60VI, K101Q, K122P, I135L, S162A, K173AT, Q174K, N175NY, D177E, T200A, Q207E, R211RK, P243H, V245Q, T286A, E291D, V292I, I293V, P294T, E312EK, S322T, G335D  
CIRCB-45AH CIRCB-45AH None None   P4H, V35T, E36D, T39L, K102KR, A158S, S162A, K173T, Q174N, D177E, T200A, Q207E, V245Q, E248N, D250E, V276I, T286A, E291D, V292I, I293V, P294T, V317VA, S322T, G335D D186DE, D192DH 
CIRCB-46AH CIRCB-46AH None None   P4N, V35T, E36D, T39L, V60I, K102Q, K122E, D123S, I135V, S162A, K173T, Q174N, D177E, I178M, T200A, E204Q, Q207E, V245Q  
CIRCB-48AH CIRCB-48AH None None   V35T, E36D, K49R, V60I, D123DE, I135V, Q145M, S162A, K173M, Q174K, D177E, G196E, T200A, Q207D, R211K, V245Q, D250E, Y271H, T286A, V292I, I293V, P294T, S322T, I326V, G335D W24WCFL, E29K 
CIRCB-49AH CIRCB-49AH None None  A98AG V35I, K122AV, D123DN, I135L, K166KR, E169D, K173T, D177E, I178IL, G196E, T200K, I202V, Q207E, V245Q, E248ED  
CIRCB-53AH CIRCB-53AH None None   V35T, E36D, T39L, V60I, D123E, I135V, I142V, S162C, K173T, Q174K, D177E, I178M  
CIRCB-54AH CIRCB-54AH None None  K103N V35T, E36D, T39L, K122P, D123E, I135V, E138ED, Q145QH, A158AT, S162A, E169EK, K173T, Q174R, D177E, I178L, T200A, I202IL, Q207E, R211K A98AP, R172RI, H198HP, R199RI, K201K* 
CIRCB-56AH CIRCB-56AH None None   V35T, E36D, V60I, K104KR, K122Q, I135V, S162A, K173T, Q174K, D177E, I178M, G196E, Q207E, R211K, V245Q, P247A, K275Q, T286A, E291D, V292I, I293V, P294T, S322A, I326V, G335D  
CIRCB-57AH CIRCB-57AH None None   I5X, K11T, V35T, T39A, V118I, K122E, D123N, Q174N, D177E  
CIRCB-59AH CIRCB-59AH None None   V35T, E40D, V60I, I142IK, A158AT, S162A, K173T, Q174K, D177E, G196E, T200A, Q207E, R211K, F214L, V245Q, E248D, A272P, K275R, Q278N, T286A, E291D, V292I, I293V, P294T, S322G, I326V, E328EK, G335D  
CIRCB-60AH CIRCB-60AH None None   K11T, K20R, V35T, K122E, D123N, I135IT, K166R, K173S, V179I, T200AE, I202V, Q207A, R211K, V241I, V245L, Y271H, T286A, E291D, I293V, P294T, E312D, I329V, G335D  
CIRCB-61AH CIRCB-61AH None None   V35T, I142V, S162A, T165TI, K173AT, Q174R, D177E, E194EK, T200A, Q207GR, R211E, V245Q, E248D, D250DE, K277R, T286A, E291D, V292I, I293V, P294T, S322T, I326V, Q334N, G335D  
CIRCB-62AH CIRCB-62AH None None   V35T, V60I, D121Y, K122E, E138A, T139A, S162A, K173R, Q174E, D177E, V179I, T200A, Q207E, F214L, V245KN, T286A, E291D, V292I, I293V, P294T, S322A, G335D  
CIRCB-63AH CIRCB-63AH None None   V35T, T39M, V90I, K122E, D123N, A158S, S162A, K173T, Q174K, D177E, T200A, Q207G, R211K, P243T, I244V, V245Q, V261I, K275R, V276I, T286A, E291D, V292M, I293V, P294T, E297K, S322T, I326V, G335D, Q336H