<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Novitsky (2015)
Title Long-range HIV genotyping using viral RNA and proviral DNA for analysis of HIV drug resistance and HIV clustering.
Citation J Clin Microbiol
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 647
NumPts 647
Subtype C

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 647 Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
bcpp_022 bcpp_022 None    D25E, V31I, L101I, T112V, T125A, K136Q, V165I, H171L, V201I, L234I  
bcpp_030 bcpp_030 None    E11D, S17N, S24D, D25E, V31I, M50I, I72V, I84M, F100Y, L101I, T112V, T124A, T125A, K136Q, K188R, V201I, K211R, T218I, L234I, A265V, I268V  
bcpp_061 bcpp_061 None    E11D, D25E, V31I, M50T, L101I, T112V, T124N, K136Q, V201I, T218I, L234I, A265V, R269K  
bcpp_099 bcpp_099 None    D25E, V31I, L101I, T112V, T124A, V201I, T218I, L234I, A265V, R269K  
bcpp_102 bcpp_102 None    D25E, V31I, M50T, I72V, L74I, I84M, L101I, T112I, T124A, T125A, K136Q, G163E, D167E, V201I, L234I, R269K  
bcpp_118 bcpp_118 None    S24G, D25E, L101I, T112V, T124A, T125A, K136N, K188N, S195C, V201I, K211R, L234I, A265V  
bcpp_129 bcpp_129 None    S17N, S24D, D25E, E35Q, S39C, M50I, I72V, F100Y, L101I, T112V, T124A, T125V, K136Q, V201I, K211R, L234I, A265V  
bcpp_138 bcpp_138 None    D25E, V31I, L74I, L101I, T112V, S119P, T124A, T125A, K136Q, D167E, I182V, K188R, V201I, I220L, Y227F, L234I, A265V  
bcpp_140 bcpp_140 None  E138K  D6N, R20K, S24N, V31I, L101I, T112V, T124A, K136Q, M154I, E157K, K188R, V201I, K215N, L234I, W243*, A265V E11N, D25K, E48K, D64N, G106E, E152K, D167K 
bcpp_151 bcpp_151 None    D25E, V31I, M50I, I72V, F100Y, L101I, K111T, T112V, T125A, K136Q, V201I, T218I, L234I, R269K  
bcpp_166 bcpp_166 None    S24N, D25E, V31I, M50I, F100Y, L101I, T112V, T124A, T125A, K136Q, V165I, V201I, L234I, A265V Y99C 
bcpp_179 bcpp_179 None    S17N, D25E, V31I, K34R, M50I, I72V, I84M, F100Y, L101I, T112V, T124A, T125A, K136Q, V165I, V201I, Q221H, N222H, L234I, D270N R224Q 
bcpp_187 bcpp_187 None    S17N, D25E, S39C, M50I, I72V, F100Y, L101I, T124A, T125A, K136Q, K188R, V201I, T218I, L234I, I251L, A265V, R269K  
bcpp_193 bcpp_193 None    K14R, S24N, D25E, V31I, M50T, I60V, F100Y, L101I, T112V, T124A, T125A, K136Q, K188R, V201I, K215N, T218I, I220V, L234I, D256E, A265V, R269K  
bcpp_211 bcpp_211 None    D6E, K14R, D25E, V31I, K34R, M50I, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, I220V, L234I, D253E, A265V  
bcpp_216 bcpp_216 None    E11D, D25E, V31I, M50I, L101I, T112V, T124N, K136Q, V201I, K215N, T218I, L234I, A265V  
bcpp_225 bcpp_225 None    S24G, D25E, E48G, F100Y, L101I, T112V, T124A, T125A, K136Q, K188R, V201I, L234I, A265V  
bcpp_260 bcpp_260 None    D25E, V31I, K34R, M50I, I72V, I84M, L101I, K111R, T112V, T124A, T125A, K136Q, V201I, L234I, A265V  
bcpp_270 bcpp_270 None    D25E, V31I, M50I, I72V, F100Y, L101I, T112V, T124N, T125A, K136Q, K188R, V201I, L234I, A265V, R269K  
bcpp_296 bcpp_296 None    K14R, D25E, K34R, M50I, F100Y, L101I, T112V, S119P, T124A, T125A, K136Q, V201I, T218I, I220V, L234I  
bcpp_301 bcpp_301 None    S17N, D25E, V31I, I72V, I84M, F100Y, L101I, T112V, S119T, T124A, T125A, K136Q, V201I, T206S, I208L, K211Q, T218I, L234I, A265V  
bcpp_377 bcpp_377 None    K14R, V31I, M50I, I72V, P90T, L101I, T112I, T124N, T125A, K136Q, K156N, G163N, V201I, K211R, L234I, R269K  
bcpp_381 bcpp_381 None  E138K G140R D6N, W19*, R20K, M22I, D25E, D41N, M50I, G59E, I60V, I72V, L74I, E96D, F100Y, L101I, T112V, T124S, T125A, W131*, W132*, G134S, K136Q, M154I, E157K, V201I, L234I, R269K D3N, G4K, E13K, E35K, G47E, G52R, G70R, G149R, E246K 
bcpp_409 bcpp_409 None    E11S, S24D, D25E, V31I, M50T, L101I, T112V, K136Q, K156R, V201I, L234I, R269K  
bcpp_414 bcpp_414 None    D25E, V31I, M50I, I60V, L101I, T112I, T124N, T125A, K136T, D167E, F181L, V201I, T218I, L234I, A265V  
bcpp_442 bcpp_442 None    S17N, D25E, L45I, M50I, I84M, F100Y, L101I, T112V, T124A, T125A, K136Q, G163V, K188R, V201I, L234I, A265V  
bcpp_450 bcpp_450 None    D25E, V31I, M50I, F100Y, L101I, T112V, S119T, T124A, T125A, K136Q, D167E, V201I, L234I, A265V, R269K  
bcpp_461 bcpp_461 None    E11D, D25E, V31I, M50V, I60V, I72V, L101I, T112V, T125A, I135L, K136Q, V150A, D167E, K188R, Y194C, V201I, K211T, N222H, L234I, A265V  
bcpp_468 bcpp_468 None    K14R, D25E, M50I, I84M, L101I, T112V, S119T, T124A, T125A, K136Q, V201I, D207N, K211T, T218I, L234V, N254K, S255G R224Q 
bcpp_495 bcpp_495 None    K14R, D25E, V31I, M50I, S57G, L74I, F100Y, L101I, T112V, T124A, T125A, K136Q, D167E, V201I, T218I, L234I, R269K  
mpp_031 mpp_031 None    K14R, D25E, K34R, F100Y, L101I, T112V, T125A, K136Q, V201I, L234I, A265V  
mpp_032 mpp_032 None   G163R D6N, W19*, V31I, D41N, D55N, G59E, L101I, T112V, S119T, T124A, T125A, K136Q, M154I, E157K, R166K, V201I, I208L, T218L, R231K, L234V, W235*, W243* D3N, G4K, E10K, E11K, E13K, D25K, E35K, E48K, G52E, D64N, E69K, G70K, G82S, E87K, G94K, G106E, R107K, G149E, D167N, E170K, E246K, G247R, D253N, R269Q 
mpp_043 mpp_043 None    K14R, D25E, V31I, L45Q, M50I, I72S, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, A265V  
mpp_045 mpp_045 None    D25E, V31I, K34R, M50I, I72V, L74I, E96D, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218M, L234I  
mpp_061 mpp_061 None    S24N, D25E, L45Q, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, K188R, V201I, T218I, L234I  
mpp_063 mpp_063 None    S17N, V31I, L45Q, M50I, I72V, F100W, L101I, T112V, T124A, T125A, K136Q, D167E, K188R, V201I, L234I, A265V, R269K  
mpp_064 mpp_064 None    K14R, S24N, D25E, V31I, I84M, F100Y, L101I, T112V, T124N, T125A, K136Q, K156R, V201I, I203M, A205S, T218I, K219N, N222K, L234I, A265V  
mpp_070 mpp_070 None    E13G, S17N, D25E, V31I, G59E, I84M, L101I, T124G, T125A, K136Q, V201I, T218I, L234I G47K, G52R, G70K, G94R 
mpp_106 mpp_106 None    K14R, S24N, D25E, K34R, I84M, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T206S, K211R, L234I  
mpp_110 mpp_110 None   G140R S17N, D25E, V31I, I72V, F100Y, L101I, T112V, T124A, T125A, W131*, W132*, K136Q, G163A, I182V, V201I, T218I, L234I, W243*, R269K G4R, G47E, G52R, G149R, R224Q 
mpp_111 mpp_111 None    D6E, E10D, S17C, D25E, V31I, M50T, I84M, Q95S, L101I, T112V, T124A, T125A, K136Q, N222H, L234I  
mpp_118 mpp_118 None    K14R, D25E, V31I, K34R, I84M, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, K215N, L234I, A265V  
mpp_120 mpp_120 None    E11D, S24N, D25E, V31I, M50I, I60T, I84M, A91V, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, I208M, K215N, L234I, R269K  
mpp_124 mpp_124 None  E138K, R263K G140R E11D, W19*, M22I, S24N, V31I, L101I, W108*, K111Q, T112V, T124N, W131*, W132*, G134S, K136Q, M154I, E157K, G163S, R166K, V201I, L234I, W235*, W243* G4R, D25K, G47E, G52R, G59R, G70R, E96K, G106R, G149R, E152K, E170K, G189K, G190R, G192E, R224Q, G247R 
mpp_133 mpp_133 None    E11D, S17N, D25E, V31I, M50I, I72V, L74I, I84M, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, A265V, R269K  
mpp_136 mpp_136 None   G140R W19*, D25E, K34R, M50I, I72V, F100Y, L101I, T112V, T124A, T125A, W132*, K136Q, K188R, V201I, L234I, A265V, R269K G4R, G47E, G70R 
mpp_137 mpp_137 None  E138K G140R, G163R G4E, D6N, W19*, R20K, D41N, D55N, W61*, I84M, F100Y, L101I, T112V, T124A, T125A, W132*, K136Q, M154I, E157K, R166K, V201I, D229N, L234I, D253E D3N, E10K, E11K, E13K, D25K, G47K, E48K, G52E, D64N, E69K, G70K, E96K, G106K, R107K, D116N, G149E, E152K, D167N, E170K, E212K, G237E 
mpp_141 mpp_141 None    E11D, S24N, D25E, V31I, K34R, I84M, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, K211R, I220L, L234I  
mpp_142 mpp_142 None  E138K G140K, G163R D6N, W19*, R20K, V31I, D41N, M50I, D55N, I72V, V79I, F100Y, L101I, W108*, T112V, T124A, T125A, W131*, W132*, K136Q, M154I, E157K, R166K, V201I, T218I, D229N, R231K, L234I, W243*, A265V, R269K D3N, G4K, E10K, E11K, E13K, D25K, E35K, G47K, E48K, D64N, E69K, G70K, E85K, G94E, E96K, G106E, R107K, G118S, E152K, D167N, E170K, M178I, E246K 
mpp_144 mpp_144 None    D25E, V31I, I60V, F100Y, L101I, T112V, T124A, T125V, K136Q, G163Q, V201I, D207N, N222H, L234I, D256E  
mpp_145 mpp_145 None    D25E, V31I, M50I, I72V, F100Y, L101I, T124N, T125A, K136Q, K188R, V201I, Q216N, N222T, L234I, A265V, R269K  
mpp_149 mpp_149 None    S17N, D25E, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, K211R, T218I, L234I, A265V, R269K  
mpp_155 mpp_155 None   L74M K14R, D25E, L28I, L45Q, I72V, I84M, P90T, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I, A265V, R269K  
mpp_160 mpp_160 None   L74M D25E, M50I, L101I, T112V, T125P, K136Q, D167E, V201I, T218I, L234V, A265V  
mpp_164 mpp_164 None    E11D, V31I, F100Y, L101V, G106A, T112V, T124A, T125A, K136Q, K173R, I200M, V201I, K211R, T218I, K219Q, L234I  
mpp_169 mpp_169 None    D25E, V31I, I72V, F100S, L101I, K111Q, T112V, T124A, T125A, D167E, V201I, T218L, L234I  
mpp_189 mpp_189 None   T97A K14R, D25E, V31I, M50T, I84M, A91E, F100Y, L101I, T112V, S119R, T124A, T125A, K136Q, F181L, V201I, L234I  
mpp_191 mpp_191 None    E11D, S24N, D25E, V31I, M50V, I72V, F100Y, L101I, T112I, T124A, T125A, K136Q, F181L, V201I, K211R, T218I, L234I, A265V  
mpp_196 mpp_196 None    K14R, S24N, D25E, V31I, M50I, I72V, L101I, T112V, S119G, T122I, T124A, T125A, K136Q, D167E, V201I, K211R, T218I, L234I, D253E, N254K, S255G, R269K  
mpp_212 mpp_212 None   G140R E11D, W19*, V31I, V37I, M50I, G59E, I60V, I72V, F100Y, L101I, T112V, T124A, T125A, W131*, I135V, K136Q, M154I, R166K, I200M, V201I, K211R, T218I, L234I G4R, G47E, G52R, G149R, E170K 
mpp_218 mpp_218 None    D25E, V31I, M50I, L101I, T112V, T124S, T125A, I135L, K136Q, K173R, K188R, V201I, T218I, L234I, A265V, R269K  
mpp_219 mpp_219 None    D25E, K34R, L45I, M50I, I72V, F100Y, L101I, T112V, T124A, K136Q, V201I, T218I, L234I  
mpp_227 mpp_227 None    K7R, D25E, V31I, I72V, F100W, L101I, T112I, T124A, T125A, K136Q, V201I, D207N, K211T, L234I  
mpp_267 mpp_267 None    K14R, S17N, S39C, M50I, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T206S, T218I, L234I, I251L, A265V  
mpp_270 mpp_270 None    S17N, S24D, D25E, K34R, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, D167E, V201I, T218I, L234I  
mpp_272 mpp_272 None    K14R, A21T, A23V, D25E, V31I, I72V, F100Y, L101I, T112V, S119P, T124A, T125A, K136Q, V201I, T206S, I208L, L234I K211E 
mpp_274 mpp_274 None   G140R, G163R K7Q, E11D, W19*, S24N, V31I, M50I, C56Y, I84L, F100Y, L101I, W108*, T112V, T124A, T125A, W131*, W132*, M154I, G193R, V201I, K219N, N222K, L234I, W243*, D253E, R269K D3N, G4R, E13K, D25K, E35K, G47K, G52R, G59K, E69K, G70R, G82K, D167N, R224Q 
mpp_275 mpp_275 None   G140R, G163R G4S, E10D, E11D, W19*, S24N, D25E, V31I, L45Q, M50I, G59E, I72V, F100Y, L101I, T112V, T124A, T125A, W131*, W132*, G134S, K136Q, M154I, R166K, V201I, T218I, I220V, L234I, R269K G47E, G52R, G70R, G149R, E170K 
mpp_278 mpp_278 None    K14R, D25E, V31I, I72V, I84M, F100Y, L101I, T112V, T124A, T125A, V201I, T206S, T218I, L234I, A265V, R269K  
mpp_296 mpp_296 None   Q95K E11D, S24N, D25E, V31I, M50I, A91T, E96D, T112V, T124A, T125A, K136Q, V201I, L234I, D253E, N254K, S255D  
mpp_299 mpp_299 None    K14R, S24G, D25E, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, T206S, T218I, L234I, I251L, A265V  
mpp_307 mpp_307 None    D25E, V31I, M50I, I72V, L101I, T112V, T124A, T125A, K136Q, K188R, V201I, L234I, A265V, R269K  
mpp_308 mpp_308 None    E11D, S17C, D25E, V31I, I84M, F100Y, L101I, T112V, T125A, K136Q, V201I, L234I  
mpp_323 mpp_323 None    E10D, D25E, V31I, M50I, I72V, I84M, F100Y, L101I, T112I, T124A, T125A, K136Q, V201I, K211R, T218I, S230N, L234I, I251L, D256E, A265V  
mpp_335 mpp_335 None   T97A S17N, D25E, V31I, M50T, I84M, A91E, F100Y, L101I, T112V, S119R, T124A, T125A, K136Q, V201I, T218L, K219Q, L234I  
mpp_347 mpp_347 None    D6E, E11D, D25E, V31I, K34R, V37I, M50T, F100Y, L101I, T112V, S119T, T124A, T125A, K136Q, V201I, L234V  
mpp_354 mpp_354 None    S17N, D25E, V31I, M50I, I72V, F100Y, L101I, T112I, T124A, T125A, K136Q, V201I, L234I  
mpp_355 mpp_355 None    K14R, D25E, V31I, F100Y, L101I, T112V, T124A, T125A, K136Q, G163E, V201I, L234I, D256E  
mpp_358 mpp_358 None    D25E, V31I, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, V201I, K211R, T218I, L234I, A265V, R269K  
mpp_361 mpp_361 None    D6E, E10A, R20K, D25E, K42Q, M50I, I84M, L101I, T112V, T124N, T125A, K136Q, I182V, V201I, K219Q, I220L, L234I  
mpp_372 mpp_372 None    E11D, D25E, V31I, I72V, I84M, L101I, T112V, T124A, T125A, K136Q, V201I, K211R, K215N, T218I, L234I, A265V, R269K M178L 
mpp_378 mpp_378 None  R263K G140K, G163R D6N, S17N, W19*, S24N, V31I, D41N, I72V, F100Y, L101I, T112V, T124A, T125A, W131*, W132*, K136Q, M154I, E157K, R166K, G193R, V201I, T218L, K219N, N222K, L234I, W243*, R269K G4K, E11K, D25K, E35K, G47E, G52R, G59K, E69K, G70K, G82R, E96K, G106R, G118S, G149E, E170K, R224Q, G247R 
mpp_384 mpp_384 None    S17N, D25E, K34R, M50I, I72V, L74I, F100Y, L101I, T112V, S119T, T124S, T125A, K136Q, V165I, V201I, L234I, S255G  
mpp_385 mpp_385 None    E11D, S17N, D25E, L45V, I84M, L101I, T112I, T124A, K136Q, V165I, V201I, K211R, T218I, L234I, D256E  
mpp_394 mpp_394 None    K14R, D25E, V31I, I84M, L101I, T112V, T124A, T125A, I135V, K136Q, K188R, V201I, Y227F, L234I, S255D, A265V G4R 
mpp_399 mpp_399 None    K14R, D25E, V31I, S39N, L45V, M50I, I84M, L101I, T112I, K136Q, G163T, V201I, K211R, K215N, T218I, S230N, L234I, D256E  
mpp_407 mpp_407 None    D6E, E10D, D25E, V31I, A49T, M50I, V75A, L101V, T112V, T124A, T125A, K136Q, D167E, V201I, T218I, L234I, A265V, R269K  
mpp_411 mpp_411 None   G140K E11D, W19*, S24N, D25E, F26Y, V31I, M50I, I72V, V79I, F100C, L101I, T112V, T125A, W131*, W132*, K136Q, D167E, V201I, L234I, A265V, R269K G4R, G47K, G70R, R107K, G149R, G237E 
mpp_419 mpp_419 None   G140R, G163R E10D, W19*, M22I, D25E, V31I, M50I, L63I, L74I, L101I, T112I, W131*, W132*, K136Q, E157K, V201I, K211R, T218I, S230N, L234I, I251L, D256E, A265V G4K, G47E, G52R, G59K, G70R, R224Q 
mpp_424 mpp_424 None    K14R, S24N, D25E, V31I, M50T, F100Y, L101I, T112V, T124N, T125A, K136Q, V165I, V201I, K215N, T218L, L234I  
mpp_437 mpp_437 None    K14R, D25E, V31I, I72V, I84M, L101I, T112V, S119T, T124A, T125A, K136Q, V201I, T206S, K215N, L234I, N254Q  
mpp_440 mpp_440 None    E11D, S17N, D25E, M50I, I72V, I84M, L101I, T112V, T124A, T125A, K136Q, V201I, T218I, L234I  
mpp_447 mpp_447 None   Q95K K14R, D25E, V31I, A91E, S119R, T124A, T125A, K136N, G193D, V201I, L234I, A265V  
mpp_451 mpp_451 None    E10D, E13A, K14R, S17N, D25E, V31I, S39N, M50T, H51Q, A91E, F100Y, L101I, T112V, S119R, T124A, T125A, K136Q, V201I, K211R, T218I, L234I, R269K  
mpp_454 mpp_454 None    K14R, D25E, S39C, M50I, I72V, I84M, L101I, T112V, T124A, K136Q, V201I, L234I  
mpp_461 mpp_461 None    E11D, S24N, D25E, M50I, T112V, T124N, T125A, G134N, K136Q, V201I, T218I, L234I, I251L, D256E, A265V, R269K  
mpp_463 mpp_463 None    S17N, V31I, S39N, M50I, H51Q, I72T, E96D, F100Y, L101I, T112V, T124A, T125A, K136Q, D167E, K188R, V201I, T218L, L234I, A265V, R269K  
mpp_466 mpp_466 None    K14R, D25E, V31I, L45Q, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, I141V, V201I, T218I, L234I  
mpp_478 mpp_478 None    D6E, E11D, S17T, D25E, V31I, V37I, M50T, I84M, A91T, F100Y, L101I, G106A, T112V, T124A, T125A, K136Q, K188R, V201I, L234I, A265V  
mpp_493 mpp_493 None   V54I V31I, K34R, M50I, I72V, F100Y, L101I, T112V, T124A, T125A, K136N, V150A, V201I, K211R, I220V, L234I, A265V