Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Palm (2015)
Title Cocirculation of several similar but unique HIV-1 recombinant forms in Guinea-Bissau revealed by near full-length genomic sequencing.
Citation ARHR
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 6
NumPts 6
Subtype CRF02_AG, A

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
DL3039 DL3039 None    E11D, K14R, V32I, D41N, M50I, L101I, T112V, T124A, T125A, G134D, I135V, K136T, Q137R, V201I, T206S, L234I, D270H, D279G, S283G Q214QR, R269N 
DL3234 DL3234 None    K14R, A21T, V31I, I72V, L74I, V79A, T112I, I113V, S119P, T124A, T125A, V126M, G134N, K136Q, D167DE, V201I, D207DG, L234I, N254D, D256E, S283G Q168Q*, K186KR, I251IK, Q252Q*, V259E 
DL3773 DL3773 None    K14R, V31I, I60V, L101I, T112V, T124A, T125A, G134N, I135V, K136A, K188R, G193R, V201I, K219N, N222K, L234I, I268L, K273Q, S283G R187RS 
DL4186 DL4186 None    K14R, V31I, I60M, I72V, I89T, L101I, T112M, T124A, T125A, G134N, I135V, K136T, M154T, Q168R, V201I, T206S, L234I, R269K, D288N  
DL5308 DL5308 None    K14R, V31I, I72V, T112V, T124A, T125A, G134N, K136T, M178MV, V201I, T206S, D207E, I208IL, T218I, L234I, D256E, S283G N184NS 
DL5918 DL5918 None   F121L K14R, V31I, L45Q, M50R, L101I, K111T, T112V, T124A, T125A, G134N, I135V, K136T, V165I, V201I, T206S, I208L, L234I, D256E, R269K, S283G, D286N G47E, N184NS, I251IK