<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Pessoa (2016)
Title Ultra-deep sequencing of HIV-1 near full-length and partial proviral genomes reveals high genetic diversity among Brazilian blood donors.
Citation PLoS One
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 184
NumPts 184
Subtype B, C, F, B + F

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 184 Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
10BR_MG006 10BR_MG006 None    E11D, S24G, I72V, T124A, V126M, I135V, K156N, V201I, D207E, T218S  
10BR_MG011 10BR_MG011 None   E138D K7R, E10A, S17N, T124A, T125A K156Q 
10BR_MG016 10BR_MG016 None    E10D, V32I, D41N, A49P, I72V, L101I, K156N, V165VI, V201I  
10BR_MG022 10BR_MG022 None    I72V, T125V, K156R, K211R, K215N  
10BR_MG024 10BR_MG024 None    E10D, R20K, I72V, S119G, T122I, T125A, V201I, D256DE  
10BR_MG030 10BR_MG030 None    D6E, E10D, M50T, Q137H, M154I, V201I, L234V, K273R  
10BR_MG032 10BR_MG032 None    E11D, K14R, S24N, D25E, V31I, M50T, L101I, T112M, S119G, T124N, K136Q, D167E, V201I, T206S, T218I, L234I, I251L, D256E, A265V, R269K, D278A  
10BR_MG037 10BR_MG037 None    E11D, K14R, S24N, D25E, V31I, S39C, M50I, L101I, T112V, T124N, K136Q, V201I, K215N, Q216N, T218I, L234I, I251L, S255SN, A265V, R269K, D278A V281M 
10BR_MG038 10BR_MG038 None    D6T, E10D, E13D, A23V, S39N, M50T, I60V, I72V, L74I, K111R, S119G, T122I, V201I, T218S, D278N  
10BR_MG039 10BR_MG039 None    E10D, M50I, L101I, S119G, T122I, T124N, T125A, I208L, R231K, D253E, S255R S283G 
10BR_MG041 10BR_MG041 None    E10D, S24G, L28I, M50I, I72V, S119P, T124N, T125V, D253E, D256E  
10BR_MG043 10BR_MG043 None    A21S, L101I, T112I, I113V, T124N, R166K, F181L, R187K, G189R, I203M, T210I, K219N, I220L, N222K, I251L D25N, D167N, E170K, S283G 
10BR_MG044 10BR_MG044 None    E11D, L28I, V37I, S39C, G106A, T112V, S119G, T125V, H171Q, V201I S283G 
10BR_MG045 10BR_MG045 None    L28I, L45Q, A49P, I72V, S119P, D167E, D256E  
10BR_MG051 10BR_MG051 None    E10D, L45I, M50L, I72V, T124S, K156N, T206S, I208L, E212A, K219N, N222K  
10BR_MG052 10BR_MG052 None   V151I D6E, E11D, S17C, A21S, A23V, V31I, T125A, V126L, I135V, V201I, A205S  
10BR_PE014 10BR_PE014 None    L45I, I72V, T124N, T125A, V126L, I135V, E157Q, K160Q, G193R, V201I, D232E, A265V  
10BR_PE017 10BR_PE017 None    D6T, K7E, E10D, S119P, T122I, T125A, V201VI, T218I, D256E  
10BR_PE019 10BR_PE019 None    Y15F, V31I, L45I, E96D, L101I, T112R, T124N, T125A, K156N, F181L, R231K, S255K  
10BR_PE020 10BR_PE020 None    D6T, K7E, E10D, S119P, T122I, T124A, T125A, V165I, T218I, D256E  
10BR_PE021 10BR_PE021 None    S17N, I72V, T124A, T125A, V126L, K136Q, V201VI, K211Q, I268L  
10BR_PE023 10BR_PE023 None    E11D, D25E, S39C, M50T, L101I, T122I, T124N, K136Q, L158I, V201I, T206S, L234I, I251L, R269K, D278A S283G 
10BR_PE031 10BR_PE031 None    K14R, S17T, A23V, M50I, K71N, S119R, T125A, K156N, V201I S283G 
10BR_PE033 10BR_PE033 None    S17N, S24N, M50I, I72V, K111R, T124A, T125A, V126L, T206S, I220L, Y227F  
10BR_PE036 10BR_PE036 None    D6T, K7E, S119P, T122I, T125A, T218I, D256E  
10BR_PE038 10BR_PE038 None    K14R, A21T, S39N, I72V, T124N, T125A, V126L, K219N, I220L, N222K  
10BR_PE040 10BR_PE040 None    D6E, E10D, D25E, V31I, S39N, L45R, L101I, S119G, T122I, T124A, K160N  
10BR_PE043 10BR_PE043 None    D6T, K7E, E10D, I72V, A91S, S119P, T122I, T125A, V126M, S230N, D256E  
10BR_PE044 10BR_PE044 None    V32I, S39C, I72V, T124N, V165I, V201I, I203M, T218I  
10BR_PE045 10BR_PE045 None    S17N, V31I, S39N, I113V, S119G, T124N, T125A, K156N, Y194H, K219N, N222K, S230N  
10BR_PE047 10BR_PE047 None    S17N, V31I, I72V, S119P, T124A, T125A, V126L, V201I, T206S, I208L, T218S, Q221R, N222R R284G 
10BR_PE048 10BR_PE048 None    V77I, I84M, L101I, T112V, T125A, I135V, L172V, V201I, I208L, E212L, K215N, Q216H, S230N, D256E, I268L  
10BR_PE052 10BR_PE052 None    E11D, A23V, V37I, S39M, M50I, I113V, T124N, T125A, V201I, T206S  
10BR_PE054 10BR_PE054 None    E10D, E11D, V31I, M50I, L101I, I135V, G163E, V201I  
10BR_PE058 10BR_PE058 None  G140GS G163GR E11D, A23V, I72V, K111Q, T112A, T122I, T124A, T125A, G134GR, M154MI, E157EK, G193E, V201VI, R228RK, L234H, I251V, R269RK, D278N D3DN, G4GR, E13EK, W19W*, G47GR, G52GR, G59GR, G70GR, W131W*, W132W*, R224RQ, W235W*, G237GR, W243LS, G272GR 
10BR_PE061 10BR_PE061 None   V54I S17N, R20K, L28I, I72V, L101I, T124N, K156N, I208L, E212A, D256E  
10BR_PE063 10BR_PE063 None    S24N, L101I, V165I, V201I, K211T, T218I, L234I, D256E, I268L, D270N T174I, S283G 
10BR_PE065 10BR_PE065 None    E11D, S17T, L45V, K111T, S119T, T125A, V126L, I135V, S230N, N254Q, A265V  
10BR_PE072 10BR_PE072 None    E11D, K14R, S17N, A21S, A23V, L28I, S39C, L101I, T124A, K156R, D167E, K173R, Q216H  
10BR_PE076 10BR_PE076 None    S17N, L101I, S119G, T122I, T124A, T125S, V201I, T206TS, T218I, L234I, D256E  
10BR_PE082 10BR_PE082 None   V151I S24N, V37I, M50I, L74I, I113V, T125A, G134E, D167E, T206S  
10BR_PE089 10BR_PE089 None    E11D, S24N, Y99F, L101I, T124N, I135V, I220L, Y227F  
10BR_PE095 10BR_PE095 None    E11D, K14R, S17T, T124A, T125A, V126L, K211T, D278N  
10BR_PE096 10BR_PE096 None    S24G, S39C, L45IV, I72V, T124A, V201I  
10BR_PE106 10BR_PE106 None    E11D, V32I, V37I, S39M, I113V, T124N, V201I, T206S S283G 
10BR_PE110 10BR_PE110 None    D6T, K7E, E10D, L28I, I72V, A91S, S119P, T122I, T124A, S230N, D256E  
10BR_RJ004 10BR_RJ004 None    D25E, L28I, I72V, S119P, K188R, K211R, D270H  
10BR_RJ005 10BR_RJ005 None    D6E, E10D, K14R, R20K, V31I, L68S, K71Q, I72V, A98G, L101I, S119R, T124N, K156N, T206S, D256E  
10BR_RJ008 10BR_RJ008 None    S17N, L28I, L45Q, A49P, I72V, L101I, T112A  
10BR_RJ012 10BR_RJ012 None   T97A K14R, I72V, T125A, V126M, K127R, V201I, D256E S283G 
10BR_RJ014 10BR_RJ014 None    S17T, L63I, I72V, A98G, L101I, K111T, S119P, T122I, T124A, V165I, T218I, L234V  
10BR_RJ016 10BR_RJ016 None    E11D, V32I, S39C, S119P, T122I, V201I, I220IV  
10BR_RJ017 10BR_RJ017 None    D6T, E10D, E13D, S17N, V31I, L45Q, M50I, I72V, T112A, T124N, T125A, A205S, D232E, D256E  
10BR_RJ019 10BR_RJ019 None    V31I, I72V, L101I, S119P, T206S, K211Q, I220L, Y227F, I268L, D270N  
10BR_RJ020 10BR_RJ020 None    I72V, T112A, I113V, T124N, T125A, A205T, I208L, D256E S283G, D288N 
10BR_RJ029 10BR_RJ029 None    E11D, R20K, I72V, L101V, K111T, S119T, T124A, T125A, V201I, D207N, K211T, T218I, D256E S283G 
10BR_RJ030 10BR_RJ030 None   E138D E11D, S24N, D25E, L28I, I72V, A91S, L101I, T122I, T124N, V176L, K188R, A265V  
10BR_RJ039 10BR_RJ039 None    M50T, L101I, T112V, T124N, K136Q, V201I V281M 
10BR_RJ040 10BR_RJ040 None    D6T, K7E, S17N, V31I, L74I, T112I, S119P, T124A, T125A, V201I, T206S, I220L, Q221T, L234I, A265V, R269K, D270H S283G 
10BR_RJ042 10BR_RJ042 None    D6N, K7E, M50I, I72V, I220M, Y227F, R231RK, N254K, A265V G237GE 
10BR_RJ044 10BR_RJ044 None    K14R, V32I, G70E, L101I, S119T, T124A, T125A, K136Q, L158I, V165I, V201I, T218I, L234I, D256E D3N, S283G 
10BR_RJ052 10BR_RJ052 None    E11D, S24N, V31I, M50I, I72V, A91E, S119R, T124N, T125A, V126L, I135V, V201I, K219N, N222K, S230G, D232E  
10BR_RJ055 10BR_RJ055 None    E11D, S17T, I72V, I84L, L101I, T112I, S119P, T124S, T125A, K136Q, V201I, A205S, K211R, T218I, L234V, D256E, I268L S283G 
10BR_RJ056 10BR_RJ056 None   V151I I72V, L101I, D167E, V201I, L234S  
10BR_RJ064 10BR_RJ064 None  E138EK G140GEKR, G163GEKR S17N, V31I, S39N, I72V, L101I, S119SG, T124N, G134GS, M154MI, E157EK, R166RK, A169AT, A175T, V180I, R187K, V201I, K215KN, N222NK, R231RK, V250VI, R262K, D278N, D279N A129AT, W131W*, W132W*, G149GEKR, E152EK, D167DN, E170EK, M178I, A179T, G192R, G193K, G197E, E212EK, R224RQ, W235W*, G237GR, W243W*, G247GE, D256DN, K266N, D286N, E287K, D288N 
10BR_RJ065 10BR_RJ065 None   V151I E10D, S17N, I72V, L101I, T124A, T125A, D167E, V201I, A265V S283G, D286E, E287EA 
10BR_RJ067 10BR_RJ067 None  E138K G163GR S17G, M22L, S39C, L45V, M50I, E96D, L101I, T124N, T125A, M154MI, K156N, E157EK, V165I, I182V, V201I, S230N, R231K, N254K G149GR, R284G, D286N 
10BR_RJ068 10BR_RJ068 None   V151I V31I, T124A, T125A, I182V, V201I  
10BR_RJ078 10BR_RJ078 None   V151I E10D, M50I, I72V, G163Q, S230N  
10BR_RJ083 10BR_RJ083 None   E138D S17N, V31I, M50I, L74I, S119P, T122I, T124A, T125A, K160R, T218S, I220M, Y227F, D256E S283G 
10BR_RJ085 10BR_RJ085 None    D6E, S17N, I72V, L101I, S119P, K173R, F181L, V201I, A265V, R269K  
10BR_RJ086 10BR_RJ086 None   V151I E11D, P30A, T125A, V126L, V201I, T206S  
10BR_RJ088 10BR_RJ088 None    S17N, R20K, L28I, S39C, I72V, T124A, V201I, I220L  
10BR_RJ090 10BR_RJ090 None    M22L, L28M, E35Q, K103R, T124N, T125A, V126M, I135V, I182V, V201I, L234I, A265V, R269K  
10BR_RJ091 10BR_RJ091 None    G70E, L101I, S119R, V201VI, I208L, T218TI S283G 
10BR_RJ093 10BR_RJ093 None    S17N, I84L, L101I, I113V, S119T, T124A, T125A, K136Q, G189R, V201I, A205S, K211R, T218I, L234V, D256E S283G 
10BR_RJ097 10BR_RJ097 None    D6E, E10D, V31I, K71Q, A98G, L101I, S119R, T122I, T124N, K156N, T206S, D256E S283G 
10BR_RJ099 10BR_RJ099 None    D6E, E10D, S17T, Q95R, L101I, T112V, S119P, T122I, T124N  
10BR_RJ101 10BR_RJ101 None    Q95S, T124N, K156N, I200M, I208L, K211R S283G 
10BR_RJ106 10BR_RJ106 None    E11D, A23V, D25E, V31I, D41N, I72V, S119G, T122I, T125A, D167E, V201I, I203M, K215N, N222K, S230N, A265V, R269K  
10BR_RJ110 10BR_RJ110 None    D6DN, E96D, L101I, T124N, K156N, V201I, K211R, E212S, D256E E170EK, S283G 
10BR_RJ111 10BR_RJ111 None   E138D E11D, L28I, V37I, S39C, I60M, A91T, L101I, K111T, S230N, D253E S283G 
10BR_SP002 10BR_SP002 None    S17N, R20K, L45Q, I72V, S119G, T122I, T125A, I135V, V201I, T206S, Q216H, N222K, L234H  
10BR_SP012 10BR_SP012 None    S17N, L101I, G163E, I208L, K211R, S230N  
10BR_SP015 10BR_SP015 None    S17N, V32I, D41N, I72V, L101I, K136Q, V201I, Y227YF, D256E  
10BR_SP016 10BR_SP016 None    E11D, R20K, L28I, M50I, I60V, L101I, S119P, T206S, D207N, I208L, K211T, Q221S S283G 
10BR_SP026 10BR_SP026 None    S17N, S39N, I72V, L101I, T112A, T124A, K136R, V165I, K188R, V201I, I220L, L234V, D256E, I268L, D270H  
10BR_SP027 10BR_SP027 None    E11D, R20K, V31I, L101I, I113V, S119P, T124N, T125A, K136D, L234I, A265V, R269K D286N 
10BR_SP029 10BR_SP029 None    S17N, I72V, L101I, S119T, T124A, T125A, I135V, K136Q, G163H, F181L, V201I, A205S, T206S, L234V, D256E, I268L, D270H S283G 
10BR_SP031 10BR_SP031 None    D6E, E10D, E11D, V31I, M50T, L101I, T112V, T122I, T124N, K136N, V201I, L234I, I251L, A265V, R269K, D278A V281M, S283G 
10BR_SP033 10BR_SP033 None    S17N, A23V, S24D, D25E, V31I, M50I, L101I, T112V, T124N, K136Q, V201I, T206S, L234I, I251L, A265V, R269K, D278A D288N 
10BR_SP037 10BR_SP037 None    D6E, S17N, T93S, L101I, S119P, T122I, T124N, K156N, V165I, V201I, I203IM, I208L, L234V, D256E, I268L S283G 
10BR_SP039 10BR_SP039 None    I72V, T124S, T218I, D256DE  
10BR_SP044 10BR_SP044 None    D6S, K7E, V31I, L45V, I72V, V165I, V201VI  
10BR_SP052 10BR_SP052 None   V151I K14R, V31I, I113V, T124S, T125A, V201I, S230N R284G 
10BR_SP063 10BR_SP063 None    S17N, I84L, L101I, K111R, S119T, T124A, T125A, K136Q, V201I, K211R, Q214E, T218I, L234V, D256E S283G 
10BR_SP065 10BR_SP065 None    E10D, I72V, T112A, T124N, T125A, V126M, V201I, A205S, I220F, D256E  
10BR_SP067 10BR_SP067 None    D6T, K7Q, E10D, E11D, E13D, R20K, V31I, I60M, L101I, S119G, T122I, T124N, G193E, V201I, T218S, Y227F, S255N, D256E S283G 
10BR_SP068 10BR_SP068 None    E10D, V31I, M50T, I84L, L101I, S119T, T124A, K136Q, V201I, L234V, D256E S283G 
10BR_SP074 10BR_SP074 None    S39C, L101I, S119P, T124N, T125A, V180I, V201I, K219N, N222K, S230N, I268L