Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Panichsillapakit (2016)
Title Prevalence of Transmitted HIV Drug Resistance Among Recently Infected Persons in San Diego, CA 1996-2013.
Citation JAIDS
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 496
NumPts 496
Subtype B, D, CRF02_AG, CRF01_AE, C, G


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Page 1   listing Isolate 1 to Isolate 100 from Total 496 Clinical PR Isolates

22k/20100805 22k None    I13V, L19V, K20M, E35D, R41K, R57K, I62V, L63P, T74K, I93L  
22m/20100812 22m None    N37H, R41K, R57K, L63LP, V77I, V82VI, I93L T74TI, R87RG 
22n/20100830 22n None    N37D, L63P, H69Q, I72M  
22y/20010316 22y None    K14R, L33V, N37IT, R41K, I62V, I64V  
238/20100812 238 None   L33I K20R, M36I, R41K, Q61E, L63P, E65D, A71T, I93L  
23c/20091211 23c None    I13V, D60E, L63S, I64V, V77I  
2au/20100729 2au None    I15V, L19I, E35D, N37E  
2jm/20101018 2jm None    R41K, L63A, A71T, I72T, V82I, I93L  
2mb/20031205 2mb None    E35D, N37S, L63P, I93L  
2pb/20101022 2pb None    I13V, L33V, N37A, I64V  
2yb/20090203 2yb None    P39T, L63P, H69Q, V77I  
32j/20100518 32j None    E35D, I62IV, L63NT, T74S, V77I, L89M  
37a/20030929 37a None    R41K, D60DE, L63G, V77VI, I93IL R8R* 
37f/20101210 37f None    T12S, K14R, I15V, L19Q, L63P, K70R  
3hv/19970130 3hv None    T12S, R57K, L63P, V77I, I93L  
3in/19971124 3in None  M46L  T12P, L63P, C67S, V77I, I93L  
3iv/20020305 3iv None    I15V, E35D, L63P, V77I  
3ix/19980319 3ix None    D60E, Q61E, L63P  
3j8/19980608 3j8 None    I15V, M36I, R41K, H69K, K70R, L89M, I93L  
3jj/20050318 3jj None    K14R, I15V, N37NS, P39PT, R41RK, I64V, C67CY, I72IV, V77VIM  
3kd/19990603 3kd None    I13V, I15V, M36I, L63P, K70T  
3ki/19990722 3ki None    I64V  
3kn/19990820 3kn None    R41K, L63LP  
3kz/19991018 3kz None    T12P, I15V, L19Q, M36I, L63P, V77I, I93L  
3md/19991217 3md None  I54V, V82A  L19I, N37ND, L63P, A71V, I72IV, I93L  
3mt/20000317 3mt None    I15V, M36I, I62V, L63H, I72IV  
3nd/20000801 3nd None    N37H, R41K, V77I, I93L  
3ni/20000814 3ni None    E35D, I62IV, L63LP, T74S, V77I, L89M  
3nr/20001002 3nr None    T12N, E35D, I62V, L63P  
3p6/20001121 3p6 None    E35D, N37T, R41K, I62IV, L63APT, E65ED, L89M  
3pa/20001130 3pa None    E35D, R41K, L63P, A71T, I72T, V82I, I93L  
3q7/20010530 3q7 None    E35D, V77I, L89M  
3qf/20010625 3qf None    I13V, E35D, N37T, L63P  
3sj/20011119 3sj None   V11I N37D, L63LP  
3sk/20011107 3sk None    R41RK, I62IV, L63P, I64L, I72IV, V77I, I93IL  
3ss/20011130 3ss None    L63T  
3sw/20011214 3sw None    L63P  
3tq/20020328 3tq None    K14R, E35D, N37S, R41K, L63P, I72V  
3ts/20020402 3ts None    E35D, M36I, N37D, L63Q, I64V, E65D  
3ui/20020510 3ui None    L10I, K14R, N37D, R41K, L63V, V77I, I93L  
3uy/20020718 3uy None  D30N N88D I13V, N37S, K45R, R57RK, L63P, A71T, I72V, V77I  
3vq/20021004 3vq None  I54V, I84V, L90M  L10I, K20R, E35D, M36I, N37S, R57K, L63P, A71V, I93L  
3vv/20021021 3vv None    E35D, L63P, V77I, I93L  
3x2/20030113 3x2 None    E34EG, M36MT, P39T, I62V, L63P, H69Q, V77I  
3xa/20030123 3xa None    E35D, L63P, V77I, I93L  
3xf/20120110 3xf None    I15V, L19I, E35D, I64V, I72V, I93L  
3xs/20030221 3xs None    K14KR, I15V, N37NS, I64V  
3zi/20030513 3zi None    T12S, L19I, N37S, I64V  
42v/20030812 42v None   L33I I13V, N37T, L63S, I64V, E65D, V77I  
42z/20030904 42z None    I15V, M36I, R41K, D60E, I62V  
43w/20031110 43w None    T12S, L19I, R57K, L63G, A71T, I72M, V77I  
448/20031114 448 None    L63C  
44f/20031121 44f None    K14R, N37H, R41K, I62V, L63P, V77I, I93L  
44t/20040105 44t None    I13V, K20R, E35ED, M36I, N37DE, I62V, L63C, I64M  
459/20040129 459 None    L10V, I13V, M36I, L63LP, I64V  
45t/20040325 45t None    L10V, N37S, R57K, I62V, L63A, A71T, V77I, I93L  
465/20040406 465 None    I62V, L63T, H69Y, V77I, I93L  
46m/20040511 46m None    T12N, E35D, L63P, I64V, E65D  
46t/20040602 46t None    T12S, E35D, M36I, R57K, L63P  
46x/20040608 46x None    D60E, Q61D, L63P W6W*, Q92A 
47c/20040629 47c None  M46L  K14R, N37C  
47d/20040702 47d None    T12TA, K14R, I15V, N37S, I64V  
47v/20040806 47v None    T12S, I13V, K14KR, L19V, L63P  
47x/20040817 47x None    T12A, E35D, R41RK, L63P  
47z/20040824 47z None    E35D, R41K, D60E, L63P, I64IV, A71AT  
483/20040824 483 None    L10I, E35D, M36I, I62V, L63T, I64L, E65D, I93L  
48x/20041122 48x None    I13V, I62IV, L63P, E65ED  
49c/20050114 49c None  M46L, I54L, I84V, L90M L33F, N88D L10I, I13V, I15V, Q18I, R41K, K55R, Q61H, I62V, L63P, C67F, H69Q, A71T, I72L, V77I, T91S, Q92K, T96S  
4ag/20050328 4ag None    L10I, K14R, I15V, N37S, R41K, I64V, I93L  
4ap/20050418 4ap None    K14R, I15V, M36I, N37S, I62V, I64V, F99FL  
4as/20050427 4as None    I13V, N37S, K45R, I62V, L63P, A71V, P79S, I93L  
4cq/20051020 4cq None  D30N L33F, N88D T12TP, I62V, L63P, V77I, I93L  
4d5/20051123 4d5 None    I15V, N37S, I64V  
4dc/20051221 4dc None    I13V, I15V, M36I, I62V, L63P  
4dx/20060317 4dx None    K14R, I15V, N37S, L38I, P39S, I64V  
4fb/20060901 4fb None    E35D, N37S, R41K, A71V, I72T, I93L R87RK 
4fj/20061103 4fj None    T12V, E35D, R41K, L63T, I64V T74TR 
4h3/20071115 4h3 None    E35D, I62V, L63P, T74S, V77I, L89M  
4h8/20080131 4h8 None    N37S, R41K, I64V  
4hs/20080721 4hs None    I13V, I15V, V77I  
4ie/20081016 4ie None    E35D, N37E, P39S, D60E, L63P, A71T, V77I  
4j2/20090123 4j2 None    I13V, K14KR, I15IV, K20KI, E35D, I62IV, L63S, I64L, A71V, V77I, I93L  
4ka/20091130 4ka None    E35D, L63P, A71T, I72E, V77I, I93L  
4ki/20090608 4ki None    L10V, I13V, K14KE, E35D, N37S, L63P  
4p5/20090729 4p5 None    I15V, N37A, I62V, L63S, I93L  
4p7/20090729 4p7 None    I13V, N37A, I64V  
4p8/20090730 4p8 None    L10I, I13V, E35EKQ, N37D, L63P, I93L  
4tq/20090924 4tq None    I13V, E35D, N37S, R57K, L63P, I64V  
5id/20020408 5id None  D30N, M46I, I84V, L90M L10F, L33I, N88D I13V, A22V, M36I, K45R, L63P, A71V, T74S, N83S, T91S, I93L  
5wg/20110218 5wg None    I13V, I15V, N37A, L63T, I64V, V77I  
6bf/20110324 6bf None    I13V, P39Q, R41K, D60E, L63P, V77I  
76b/20110523 76b None    N37S, L63P, K70T, I72T  
8fk/20110728 8fk None    T12S, K14R, I15V, L19Q, L63P, K70R  
bf9/20120104 bf9 None   L33LI I13V, K14R, E35ED, N37NT, L63P  
c4w/20120216 c4w None    I13V, K14R, K20I, E35D, M36I, R41K, H69K, K70R, V82I, L89M  
crt/20120326 crt None    T12A, N37S, R41K, I62V, L63P, C67Y, V77I, I93L  
dby/20120430 dby None    E35D, N37S, R41K, L63P, I93L  
dym/20120620 dym None    I62V, L63P, C67Y, I72V  
f7k/20120702 f7k None    R41K, L63G, A71T, I72T, V82I, I93L  
fvx/20120801 fvx None    N37S, R41K, L63A, V77I, I93L