<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Pham (2015)
Title Change in the prevalence of HIV-1 and the rate of transmitted drug-resistant HIV-1 in Haiphong, Northern Vietnam.
Citation ARHR
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 61
NumPts 61
Subtype CRF01_AE

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
BD12-169 BD12-169 None None L74V, M184V K101E, Y181I E6N, K11T, E28K, K32E, V35T, T39R, K122E, D123S, I135T, S162C, K173T, Q174K, D177E, V179I, E194D, G196E, E203D, Q207N, K238R, V245E  
FS12-50 FS12-50 None None   E6D, K11T, V35T, T39K, D123N, S162C, K173I, Q174K, D177E, T200I, Q207S, R211N, K238R, V245E  
FSW12-26 FSW12-26 None None   I5V, V35T, T39N, K122E, D123S, I135R, I142V, S162C, K173R, Q174K, I178M, G196E, Q207S, R211S, K238R  
HP12-101 HP12-101 None None   E6D, K11T, V35T, T39K, K122E, D123S, I135T, I142T, S162C, K173I, Q174K, D177E, Q207S, R211S, K238R, V245E  
HP12-106 HP12-106 None None   E6D, K11T, V35T, T39K, K122E, D123S, I135T, S162C, K173I, Q174K, D177E, I178M, T200IV, Q207N, R211S, K238R, V245E  
HP12-112 HP12-112 None None   E6D, K11T, V35T, T39A, K122E, D123S, I142V, S162C, K173I, Q174K, D177E, I178M, T200TA, R211S, V245E  
HP12-138 HP12-138 None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207N, R211I, V245E  
HP12-149 HP12-149 None None   E6D, K11T, K20R, V35T, T39K, K43Q, K122E, D123S, S162C, K173R, Q174K, D177E, I178M, T200I, Q207S, R211S, K238R, V245E  
HP12-153 HP12-153 None None   E6D, K11T, V35T, T39N, K122E, D123S, I135R, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E  
HP12-156 HP12-156 None None   E6D, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, Q207NS, R211S, K238R, V245E, K249R  
HP12-161 HP12-161 None None   E6D, K11T, V35T, T39E, K122E, D123S, S162C, K173I, Q174K, D177E, T200A, Q207G, R211S, K238R, V245E  
HP12-162 HP12-162 None None   E6D, K11T, V35T, T39K, K43Q, K122E, D123K, S162C, K173I, Q174K, D177E, T200I, Q207S, R211S, K238R, V245E S3G 
HP12-172 HP12-172 None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, N175NH, D177E, I178M, V179I, Q207S, R211S, K238R, V245E  
HP12-179 HP12-179 None None   E6G, K11T, V35T, T39K, K122E, D123S, I135M, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S  
HP12-182 HP12-182 None None   E6D, V35T, T39K, K122E, D123S, T165I, K173I, Q174K, D177E, I178M, Q207S, R211S  
HP12-185 HP12-185 None None   P4S, E6D, K11T, V35T, T39Q, K122E, D123S, I142V, S162C, Q174N, D177E, I178M, T200A, Q207S, R211S, V245E  
HP12-190 HP12-190 None None   E6D, K11T, V35T, T39N, K122E, D123S, S162C, F171Y, K173R, Q174K, D177E, I178M, Q207E, R211K, K238R, V245E  
HP12-192 HP12-192 None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, T200A, Q207S, R211S, K238R, V245E S3N 
HP12-22 HP12-22 None None   E6D, V35T, T39KN, V60VI, T107S, K122E, D123S, S162C, K173I, Q174K, D177E, G196E, R206RK, Q207S, R211S, K238R, V245E  
HP12-221 HP12-221 None None   E6D, K11T, V35T, K122E, D123S, S162C, K173I, Q174K, D177E  
HP12-225 HP12-225 None None   V10I, V35T, T39E, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, V245E  
HP12-229 HP12-229 None None   E6D, V35T, T39K, K122E, D123S, I135T, S162C, T165I, K173R, Q174K, D177E, G196E, Q207S, R211S, K238R  
HP12-230 HP12-230 None None   E6D, V35T, T39E, T69N, K102Q, K122E, D123S, I135V, S162C, K173V, Q174K, D177E, T200A, I202V, Q207S, R211S, K238R, V245E K103I 
HP12-248 HP12-248 None None   E6D, K11T, V35T, K122E, D123S, S162C, K173I, Q174K, T200A, Q207S, R211S, K238R, V245E  
HP12-255 HP12-255 None None   E6D, V35T, T39K, K43E, I47L, V60I, K122E, D123S, K173I, Q174K, T200I, Q207A, R211S, K238R, V245E V261E 
HP12-270 HP12-270 None None   E6D, K11T, V35T, T39K, K43E, K122E, D123S, S162C, K173I, Q174K, D177E, V179I, Q207A, R211S, K238R, V245E  
HP12-279 HP12-279 None None   P4H, E6D, K11T, V35T, K122E, D123S, S162C, K173R, Q174K, D177E, Q207S, R211S, K238R, V245E  
HP12-291 HP12-291 None None  Y181YC E6D, V10I, K11T, V35T, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, T200A, Q207S, R211S, K238R, V245E  
HP12-297 HP12-297 None None  V179D V35T, T39A, K122E, D123S, S162C, K173T, Q174K, D177E, T200A, Q207G, R211S, K238R, V245E  
HP12-298 HP12-298 None None   E6N, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207A, R211S, K238R, V245E  
HP12-30 HP12-30 None None   E6D, K11T, V35T, T39K, K122E, D123N, I142V, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E  
HP12-303 HP12-303 None None   E6D, V35T, K43R, K122E, D123S, S162C, K173T, Q174R, D177E, T200A, Q207S, R211S, K238R, V245E  
HP12-304 HP12-304 None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, Q207S, R211N, K238R, V245E  
HP12-323 HP12-323 None None   E6D, V35T, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, E203D, Q207S, R211S P133L 
HP12-327 HP12-327 None None   E6D, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, Q207S, R211S, K238R, V245E  
HP12-33 HP12-33 None None   E6D, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, V179I, Q207S, R211S, V245E  
HP12-335 HP12-335 None None   E6D, K11T, E28R, V35T, T39N, K122E, D123S, I135IT, S162C, K173I, Q174K, D177E, T200I, Q207S, R211S, K238R, V245E E29R 
HP12-340 HP12-340 None None   E6D, V35T, T39E, K122E, D123S, I142V, S162C, K173V, Q174K, D177E, T200A, Q207S, R211S, K238R, V245E  
HP12-346 HP12-346 None None   E6D, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, K238R, V245E  
HP12-350 HP12-350 None None   E6D, K11T, V35T, T39K, K122E, D123S, I135T, S162C, K173I, Q174K, D177E, Q207K, R211S  
HP12-358 HP12-358 None None   E6D, K11T, V35T, T39N, D121Y, K122E, D123S, I135T, S162C, K173IV, Q174K, D177E, Q207S, R211S, K238R, V245E  
HP12-368 HP12-368 None None   K11T, V35I, T39K, T69S, V111I, D123S, S162C, K173I, Q174K, D177E, V179I, I202V, Q207N, R211S, V245E  
HP12-37 HP12-37 None None V75M Y181C E6N, K11T, P14S, I31V, V35T, T39E, V106I, K122E, D123N, I135T, S162C, K173V, Q174K, D177E, Q207S, R211S, H221Y, K238R, V245E  
HP12-381 HP12-381 None None  E138K E6D, K11T, V35T, T39K, K43E, E53D, K122E, D123S, S162W, K173I, Q174K, D177E, V179I, Q207S, R211S, K238R, V245E  
HP12-388 HP12-388 None None   E6D, K11T, K20R, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, Q207S, R211S, K238R, V245E K154T 
HP12-390 HP12-390 None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, Q207S, R211S, K238R, V245E  
HP12-43 HP12-43 None None   E6D, K11T, V35T, E36D, T39N, K122E, D123K, I135T, S162C, K173I, Q174K, D177E, Q207S, R211S, K238R, V245E  
HP12-46 HP12-46 None None   I2F, E6D, K11T, V21I, V35T, T39K, K66R, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, T200A, Q207S, R211S  
HP12-65 HP12-65 None None T215S  E6D, K11S, V35T, T39K, K122E, D123S, I135T, S162C, K173I, Q174K, D177E, I178M, T200A, Q207S, R211S  
HP12-69 HP12-69 None None   E6D, V35T, T39K, K122E, D123N, S162C, K173A, Q174K, D177E, I178M, Q207S, R211S  
HP12-73 HP12-73 None None   E6D, E28K, K32E, V35T, T39K, V60I, K122E, D123S, I135T, S162C, K173I, Q174K, D177E, V179I, T200A, Q207S, R211S, K238R, V245E  
HP12-74- HP12-74- None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, Q207S, R211S  
HP12-75 HP12-75 None None   E6D, K11T, V35T, T39K, D123S, S162C, K173I, Q174K, D177E, D192N, Q207S, R211S, K238R, V245E E29K, M41I, E42K, G93E 
HP12-8 HP12-8 None None   E6D, K11T, V35T, T39K, K122E, D123S, I135T, S162C, K173I, Q174K, D177E, Q207S, R211S  
HP12-80 HP12-80 None None   E6D, K11T, V35T, T39Q, D123S, I135V, S162C, K173R, Q174K, D177E, Q207N, R211S, K238R, V245E  
HP12-82 HP12-82 None None   E6D, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, V245E, V254I S3N 
HP12-85 HP12-85 None None   E6D, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, Q207S, R211S  
HP12-88 HP12-88 None None   E6N, K11T, V35T, T39K, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207N, R211S, V245D, K249R  
HP12-90 HP12-90 None None   E6D, K11T, V35I, K49R, T107S, K122E, D123S, I135T, S162C, K173I, Q174K, D177E, I178M, V179I, T200A, Q207S, R211S, V245E  
HP12-93 HP12-93 None None   E6D, K11T, V35T, T39K, K122E, D123K, S162C, K173I, Q174K, D177E, Q207K, R211S, K238R, V245E, K249R  
HP12-96 HP12-96 None None   E6D, K11T, V35T, T39N, K102Q, K122E, D123S, S162C, K173I, Q174K, D177E, I178M, Q207S, R211S, V245E