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Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Van Tran (2016)
Title A strong association of human leukocyte antigen-associated Pol and Gag mutations with clinical parameters in HIV-1 subtype A/E infection.
Citation AIDS
SelectedGene PR
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 359
NumPts 359
Subtype CRF01_AE, A

 

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Page 1   listing Isolate 1 to Isolate 100 from Total 359 Clinical PR Isolates


SubjectIsolatePIsWksPIMajorPIMinorCommonUnusual
VI-004 VI-004 None    L10V, T12P, I13V, K14R, G16E, E35D, M36I, R41K, L63N, H69K, L89M  
VI-006 VI-006 None    L10LI, I13V, E35D, M36I, R41K, L63LP, H69K, L89M  
VI-012 VI-012 None    I13V, K20R, E35D, M36I, R41K, H69K, L89M  
VI-022 VI-022 None    I13V, E35D, M36I, N37D, R41K, D60E, H69K, K70R, L89M  
VI-023 VI-023 None    I13V, E35D, M36I, N37D, R41K, D60E, H69K, K70R, L89M  
VI-025 VI-025 None    L10I, I13V, E35D, M36I, R41K, L63P, H69K, K70R, L89M  
VI-028 VI-028 None    I13V, G16E, E35D, M36I, R41K, K43R, H69K, K70R, L89M  
VI-038 VI-038 None    L10V, I13V, G16E, M36I, R41K, H69K, L89M  
VI-046 VI-046 None    I13V, K20R, E35D, M36I, R41K, K43R, R57K, H69K, K70R, L89M  
VI-050 VI-050 None   I84IL T12TP, I13V, K14R, Q18H, E35D, M36I, R41K, H69K, L89M, T91TI  
VI-054 VI-054 None    I13V, Q18H, E35D, M36I, R41K, H69K, V82I, L89M  
VI-062 VI-062 None    I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M  
VI-073 VI-073 None    E35D, M36I, R41K, H69K, V82I, L89M, I93L  
VI-075 VI-075 None    G16E, E35D, M36I, N37D, R41K, L63C, H69K, I93L  
VI-079 VI-079 None   V11I L10M, I13V, G16E, E35D, M36I, R41K, L63C, H69K, L89M  
VI-080 VI-080 None    I13V, I15V, G16E, K20KR, M36I, P39S, R41K, H69K, V82VI, L89M  
VI-082 VI-082 None    L10I, I13V, G16A, E35D, M36I, R41K, I62V, H69K, K70R, V82I, L89M  
VI-087 VI-087 None    I13IV, E35D, M36I, R41K, H69K, L89M, I93IL  
VI-090 VI-090 None    M36I, R41K, L63S, H69K, L89M  
VI-093 VI-093 None    G16E, K20R, E34EK, E35D, M36I, R41K, R57K, H69K, K70R, I72IV, L89M  
VI-094 VI-094 None    I13V, G16E, K20I, E35D, M36I, R41K, H69K, L89M  
VI-100 VI-100 None    M36I, R41K, L63P, H69K, V82I, L89M, I93L  
VI-101 VI-101 None    I13V, G16E, K20R, E35D, M36I, N37D, R41K, L63H, H69K, K70R, I72T, L89M, I93L  
VI-110 VI-110 None    A22AP, E35D, M36I, R41K, D60E, L63P, H69K, L89M, I93L R8RP, D25DN 
VI-113 VI-113 None    E35D, M36I, R41K, H69K, L89M  
VI-115 VI-115 None    I13V, E35D, M36I, R41K, L63A, H69K, L89M  
VI-117 VI-117 None    E35D, M36I, R41K, H69K, L89M  
VI-118 VI-118 None    I13V, E35D, M36I, R41K, R57RK, I62V, I66IL, H69K, L89M  
VI-122 VI-122 None    L10V, I15IV, L19LV, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
VI-124 VI-124 None    I13V, E35D, M36I, R41K, R57K, H69K, L89M  
VI-125 VI-125 None    T12P, I13V, K14R, I15IV, Q18H, E35D, M36I, R41K, L63P, H69K, I72IV, L89M  
VI-126 VI-126 None    I13V, K20R, M36I, N37D, D60E, Q61E, L63P, H69K, K70R, I72V, L89M, I93L  
VI-129 VI-129 None   L33I I13V, G16E, M36I, R41K, H69K, L89M  
VI-134 VI-134 None    L10I, I13V, K20R, E35D, M36I, R41K, H69K, L89M  
VI-139 VI-139 None    G16GE, M36I, R41K, H69K, V82I, L89M, I93L  
VI-144 VI-144 None    T12P, I13V, Q18H, E35D, M36I, R41K, H69K, L89M  
VI-145 VI-145 None    L10I, I13V, K14KR, G16E, E35D, M36I, R41K, H69K, I72IV, L89M  
VI-160 VI-160 None   G48GR, Q58QE I13V, K20R, E34K, E35D, M36MIL, R41K, K55KR, Q61QR, L63C, H69K, K70R, L89M G49E, E65KR, C67C* 
VI-166 VI-166 None    L10I, I13V, G16E, E35D, M36I, R41K, H69K, K70KR, I72IV, L89IM  
VI-175 VI-175 None    I13V, E35D, M36I, R41K, R57K, D60DE, H69KR, L89M  
VI-179 VI-179 None    G16E, E35D, M36I, K43R, L63C, H69K, L89M, I93L  
VI-181 VI-181 None    I13V, K14R, E35D, M36I, R41K, H69K, L89M  
VI-193 VI-193 None    I13V, K14R, E35D, M36I, R41K, R57K, H69K, L89M  
VI-194 VI-194 None    I13V, E35D, M36I, R41K, K45R, R57K, H69K, L89M  
VI-196 VI-196 None    K20R, E35D, M36I, N37D, R41K, D60E, Q61E, L63P, H69K, L89M, I93L  
VI-199 VI-199 None    I13V, K20I, M36I, R41K, H69K, V82I, L89M  
VI-202 VI-202 None    T12PS, G16GA, L19I, E35D, M36I, R41K, L63P, H69K, V82I, L89M, I93L  
VI-206 VI-206 None    L10I, I13V, G16E, M36I, R41K, H69K, L89I  
VI-210 VI-210 None    I13V, G16E, K20I, E35DN, M36I, R41K, H69K, L89M  
VI-217 VI-217 None    I13V, G16E, K20R, E35D, M36I, R41K, W42*, H69K, L89M  
VI-219 VI-219 None    M36I, R41K, L63C, H69K, L89M, I93L  
VI-223 VI-223 None    I13V, K20R, M36I, N37D, R41K, H69K, L89I  
VI-225 VI-225 None    E35D, M36I, N37D, R41K, L63P, H69K, L89M, I93L  
VI-228 VI-228 None   L33F E35D, M36I, R41K, H69K, L89M, I93V  
VI-231 VI-231 None    I13V, K14KR, E35D, M36I, R41K, H69K, L89M  
VI-238 VI-238 None    L10V, T12TPS, I13V, G16E, K20R, E35D, M36I, R41K, R57K, H69K, K70KR, L89M  
VI-239 VI-239 None    I13V, G16E, E35D, M36I, R41K, H69K, I72IR, L89M  
VI-242 VI-242 None    I13V, E35D, M36I, R41K, H69K, K70R, L89M  
VI-243 VI-243 None    I13V, Q18H, E35D, M36I, R41K, H69K, V82I, L89M  
VI-244 VI-244 None    K14R, K20R, M36I, R41K, H69K, V82I, L89I, I93L  
VI-245 VI-245 None    L10M, I13V, E35D, M36I, R41K, H69K, V77I, L89M  
VI-247 VI-247 None    I13V, M36I, R41K, L63LP, H69K, L89M  
VI-248 VI-248 None    I13V, I15V, L19Q, K20R, M36I, L63H, H69K, V82I, L89M, I93L  
VI-251 VI-251 None    I13V, G16E, K20R, E35ED, M36I, R41K, L63PS, H69K, L89M, I93L  
VI-254 VI-254 None    G16A, E35N, M36I, N37D, R41K, H69K, K70R, L89M, I93L  
VI-258 VI-258 None    I13V, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
VI-260 VI-260 None    I15V, E35D, M36I, R41K, L63P, H69K, L89M, I93L  
VI-262 VI-262 None    I13V, G16E, E35D, M36I, R41K, D60E, H69K, K70R, L89M  
VI-264 VI-264 None    I13V, E35D, M36I, R41K, H69K, L89M  
VI-265 VI-265 None    G16E, K20R, E35D, M36I, R41K, K45R, H69K, I72T, L89M, I93L  
VI-271 VI-271 None    G16E, E35D, M36I, R41K, K43R, L63C, H69K, L89M, I93L  
VI-274 VI-274 None    G16E, E35D, M36I, R41K, L63A, H69K, L89M, I93L  
VI-275 VI-275 None    I13V, G16A, M36L, N37D, R41K, K43R, L63P, H69K, K70R, L89M, I93L  
VI-283 VI-283 None    I13V, G16E, E35D, M36I, R41K, H69K, K70R, L89M  
VI-285 VI-285 None    G16E, E35D, M36I, R41K, I62V, L63C, H69K  
VI-288 VI-288 None    E35D, M36I, R41K, R57K, L63C, H69R, L89M, I93L  
VI-292 VI-292 None    I13V, M36I, R41K, H69K, K70R, V82I, L89M  
VI-296 VI-296 None    L19I, M36I, R41K, H69K, L89M, I93L  
VI-300 VI-300 None    I13V, E35D, M36I, R41K, H69K, L89M  
VI-309 VI-309 None    I13V, M36I, R41K, L63P, H69K, V82I, L89M  
VI-314 VI-314 None  M46I  M36I, R41K, H69K, L89M, I93L  
VI-316 VI-316 None    I13V, G16E, K20R, L33V, M36I, N37HQ, P39S, L63P, H69K, I72V, L89M  
VI-327 VI-327 None    E35D, M36I, R41K, H69K, L89M  
VI-329 VI-329 None    L10I, M36I, R41K, D60E, L63IT, H69K, L89M, I93L  
VI-333 VI-333 None    I13V, G16E, E35D, M36I, R41K, H69K, K70R, V77VI, L89M  
VI-338 VI-338 None    I13V, M36I, R41K, L63M, H69K, L89M  
VI-345 VI-345 None    I13V, K20I, M36I, R41K, L63P, I64V, H69K, I72E, L89LM  
VI-351 VI-351 None    I15V, G16E, E35D, M36I, R41K, K45R, L63C, H69K, I72V, L89M  
VI-359 VI-359 None    I13V, E35D, M36I, R41K, R57K, H69K, L89M  
VI-366 VI-366 None    I13V, Q18H, E35D, M36I, R41K, H69K, V82I, L89M  
VI-375 VI-375 None    I13V, E35D, M36I, R41K, K45R, R57K, H69K, L89M  
VI-377 VI-377 None    I13V, E35D, M36I, L63P, H69K, K70R, L89M  
VI-378 VI-378 None    I13V, G16E, K20KR, M36I, R41K, D60DE, H69K, L89M, I93L  
VI-392 VI-392 None    I13V, E35D, M36I, H69Q, V82I, L89M Q18Y 
VI-396 VI-396 None    L10V, I13V, E35D, M36I, N37D, R41K, L63P, H69K, A71T, L89M, I93L  
VI-405 VI-405 None    I13V, E35D_VN, M36L, R41K, H69K, L89M, I93L  
VI-407 VI-407 None    L10V, I13V, I15LV, E35ED, M36I, R41K, L63C, H69K, L89M G16EK 
VI-408 VI-408 None    I13V, E35D, M36I, R41K, R57K, H69K, V82I, L89M  
VI-417 VI-417 None    I13V, L19V, M36I, R41K, H69K, V82I, L89M  
VI-419 VI-419 None    L10I, I13V, G16E, K20R, E35D, M36I, N37ND, R41RK, I62V, L63C, H69K, K70R, L89M