<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Cheong (2015)
Title Genetic characterization of a novel HIV-1 circulating recombinant form (CRF74_01B) identified among intravenous drug users in Malaysia: recombination history and phylogenetic linkage with previously defined recombinant lineages.
Citation PLoS ONE
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 6
NumPts 6
Subtype CRF74_01B, CRF01_AE

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
10MYKJ016 10MYKJ016 None None   V35IT, K122E, D123S, I135R, K166R, K173I, Q174K, D177E, I178M, R211S, V245M, K277KR, T286A, E291D, V292I, I293V, E312A, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, E432D, D471E, Q480H, G490E, L491S, K512R, S519N, Q524E, A534S, A554S L517EV 
10MYKJ052 10MYKJ052 None None   K11KT, K122E, D123S, I135R, I142IV, S162C, K173I, Q174K, D177E, I178IM, V189I, T200A, R211S, K238R, V245Q, T286A, E291D, V292I, I293V, E312N, D324E, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, E432D, V435M, N447S, K451R, L452V, R461K, S468T, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S  
10MYPR268 10MYPR268 None None   A98S, K122E, D123N, I135R, K173I, Q174K, D177E, I178M, T200I, R211S, V245M, E248ED, T286A, E291D, V292I, I293V, E312A, I326V, I329V, G335D, M357K, G359S, K366R, A371V, V381I, K390R, A400T, T403M, E432D, N447S, L452V, D471E, Q480H, H483Q, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
11MYJJ741 11MYJJ741 None None   V35I, R83K, A98S, K122E, D123N, I135R, K173I, Q174K, D177E, R211S, V245M, K275R, T286A, E291D, V292I, I293V, E312A, I326V, I329V, G335D, R356G, M357K, G359S, K366R, K390R, A400T, T403M, E432D, T470A, D471E, Q480H, L491S, K512R, L517V, S519N, Q524E, A534S, A554S  
11MYPR416 11MYPR416 None None   K122E, D123S, I135R, K173I, Q174K, D177E, I195L, R211S, A272P, T286A, E291D, V292VI, I293V, L310I, E312A, I326V, I329V, G335D, M357K, G359S, T369A, A371V, S379G, V381I, K390R, A400T, T403M, Y405H, E432D, V435A, D471E, Q480H, L491S, I506L, K512R, L517V, S519N, Q524E, A534S, A554S  
11MYYC672 11MYYC672 None None   V60I, K122E, D123S, I135T, S162C, K173T, Q174K, D177E, T200A, R211S, V245M, E291D, I293V, E312T, P313T, I326V, I329V, G335D, M357K, G359S, K366R, A371V, K390R, A400T, T403M, E432D, N447S, D471E, Q480H, L491S, K512R, L517I, S519N, Q524E, E529D, A534S, A554S I167IT