<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Billings (2016)
Title The number and complexity of pure and recombinant HIV-1 strains observed within incident infections during the HIV and malaria cohort study conducted in Kericho, Kenya, from 2003 to 2006.
Citation PLoS ONE
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 58
NumPts 58
Subtype A, D, C, J, G, CRF10_CD

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
KE149896V6 KE149896V6 None    K14R, N27H, V31I, I72V, T112V, I113V, T124A, T125A, K136Q, D167E, V201I, L234I S283G 
KE161801V6 KE161801V6 None    E11D, K14R, D25E, V31I, L45I, I72V, T112V, I113V, T124A, T125A, K136Q, D167E, V201I S283G, D286N 
KE169579V3 KE169579V3 None    K14R, V31I, I60M, T112V, I113V, S119T, T124A, T125A, V126F, G134N, K136Q, V201I, Q216H, D279G S283G 
KE176519V4 KE176519V4 None    K14R, V31I, S39C, M50I, I72V, L101I, T112V, I113V, T124A, T125A, K136H, D167E, Q216N, I268L S283G 
KE185405V4 KE185405V4 None    K14R, V31I, I72V, T112V, I113V, T124A, T125A, K136Q, K160R, D167E, V201I, I203M S283G 
KE196199V6 KE196199V6 None    K7R, K14R, A21T, V31I, I72V, T112V, I113V, T124A, T125A, V126F, I135V, D167E, K188R, V201I, T206S, T218S, K219N, I220L, N222K, L234I, I268L G134Q, S283G 
KE215154V4 KE215154V4 None    K14R, V31I, I60V, I72V, T112V, I113A, T124G, T125A, V126F, G134N, I135V, K136Q, G163A, V201I, L234I, S255N, D278N L68P, S283G 
KE263806V2 KE263806V2 None    K14R, A21T, I72V, L101I, T112V, I113V, T124A, T125A, G134N, K136Q, D167E, I208L, Q216H S283G 
KE275457V6 KE275457V6 None    K14R, V31I, L101I, G106A, T112V, T125V, G134N, K136T, V201I, T206S, Y227F, L234I, S255N, D256E A33T, E69K, S283G 
KE295198V5 KE295198V5 None   T97A V31I, I60M, K111T, T112V, I113V, T124A, T125A, V126F, K136Q, V165I, D167E, V201I, K211R, T218I, Q221T, L234I, D256E S283G 
KE335214V6 KE335214V6 None    K14R, I72V, Y99F, L101I, T112V, T124G, T125A, I135V, K173R, F181L, V201I, K211T, T218I, L234I, R269K, D270H  
KE344827V3 KE344827V3 None    E10A, E11D, S17N, D25E, V31I, M50I, S57G, I60V, I72V, I84M, F100Y, L101I, T112V, T124N, T125A, K136Q, V201I, T218I, L234I, S255G, A265V, R269K, D278A V250A, S283G 
KE354207V3 KE354207V3 None    K14R, V31I, I60M, I72V, K111R, T112V, I113V, T124A, T125A, V126F, A133T, G134N, I135V, K136Q, D167E, V201I S283G 
KE369195V4 KE369195V4 None    E11D, S24N, D25E, V31I, M50I, F100Y, L101I, T112V, T124S, T125A, K136H, V201I, K215N, T218L, L234I, V260I, K273Q, D278A S283G 
KE376579V4 KE376579V4 None    K14R, V31I, I72V, T112V, I113V, T124A, T125A, K136Q, D167E, V201I, I220V  
KE378531V2 KE378531V2 None   T97A K14R, A21T, K34R, M50I, T112V, I113V, T124A, T125A, V126F, G134S, I135V, D167E, V201I, K211R, N222K, L234I, A265V S283G, R284G 
KE389016V3 KE389016V3 None    S24H, V31I, I72V, L101I, T112V, S119P, T122I, T124A, T125S, K136Q, K160R, V201I, K215R, L234I, A265V G59R, S283G 
KE398838V4 KE398838V4 None   L74M K14R, S24H, V31I, I72V, Q95H, T112V, S119P, T122I, T125P, I135V, F181L, V201I, K211Q, K215R, T218I, L234V, D256E S283G 
KE404877V7 KE404877V7 None    E11D, K14R, V31I, I72V, Q95H, E96D, L101I, T112V, T124A, T125A, K136Q, D167E, V201I, T218I, L234I, I268L S283G 
KE406723V2 KE406723V2 None    K14R, V31I, I60M, T112V, I113V, T124A, T125A, V126F, K136N, D167E, S195T, V201I, I203M, K211R, T218I, L234I, S255N, I268L, D270H T97S, S283G 
KE414659V2 KE414659V2 None    K14R, A21T, I72V, T112V, I113V, T124A, T125A, K136Q, D167E, H171HR S283G, D286N 
KE452693V6 KE452693V6 None    K14R, V31I, T112I, I113V, T124A, T125A, K136Q, H171Q, V201I S283G 
KE484390V7 KE484390V7 None    L63V, I72V, L74I, A91E, T112V, I113V, S119R, V201I, T218I, L234I, D256E, A265V S283G 
KE489686V2 KE489686V2 None    S17N, M50L, T112V, I113V, T124A, T125A, V201I, L234I S283G 
KE493170V5 KE493170V5 None    S24H, K34R, M50I, I72V, L101V, K103R, T112V, S119P, T124A, T125A, K136Q, K160R, V201I, D207V_YTIATD, K215R, L234I, S255N S283G 
KE520997V4 KE520997V4 None    K34R, I60M, I72V, T112V, I113V, S119P, T122I, T124A, T125A, V126F, G134N, K136Q, D167E, V201I, L234I, K273R S283G 
KE530245V4 KE530245V4 None    E11D, K14R, A21T, V31I, Q95S, L101I, T112V, I113V, T124A, T125A, G134N, K136Q, V201I, I208L, Q216H, T218S, D256E S283G 
KE543869V2 KE543869V2 None    S17N, M50L, I72V, L101I, T112V, I113V, T124G, T125A, E157Q, K160Q, F181L, V201I, K211R, T218I, L234I, A265V, I268L E10K 
KE556528V2 KE556528V2 None    E11D, V37I, M50L, I72V, L101I, T112V, I113V, T124N, T125V, G134N, V165I, K173R, V201I, I220T S283G 
KE585573V2 KE585573V2 None    K14R, D25E, V31I, L101I, T112I, T124A, T125A, K136Q, Q177L, V201I, T206S, K211Q, Q216R, T218I, K219Q, L234I, A265V, R269K, D270E, D278A S283G 
KE607907V4 KE607907V4 None    E11D, K14R, S17T, V31I, S39C, M50I, I72V, L101I, T112V, T124G, T125A, K136Q, D167E, V201I, Q216H S283G 
KE613437V4 KE613437V4 None    S17N, M50L, I72V, L101I, T112V, I113V, K156N, D167E, K173R, V201I, K211R, E212A, K219N, N222K, L234I E87K, S283G 
KE629642V3 KE629642V3 None   E138D K14R, A21T, V31I, V32I, I60M, I72V, T112V, T124A, G134N, K136Q, E157K, D167E, V201I, I208M, K240R D3N, A33T, S283G 
KE643439V4 KE643439V4 None    R20K, V31I, I72V, T112V, I113V, T124A, T125A, V126F, I135V, K136Q, D167E, V201I, Q216H, N222K, L234I S283G 
KE649309V2 KE649309V2 None    E10A, K14R, V31I, I72V, L101I, T112V, I113V, S119G, T124A, T125V, K136Q, D167E, K173R, V201I, L234I, A265V S283G 
KE661996V6 KE661996V6 None    K14R, V31I, M50I, I72V, A91T, I113V, T124A, T125A, K136Q, D167E, V201I S283G 
KE663257V3 KE663257V3 None   T97A E11D, K14R, A21T, V31I, I60M, T112V, I113V, T124A, T125A, V126F, G134N, K136Q, G193E, V201I, T218L, L234I, D278A V281M, S283G 
KE688699V6 KE688699V6 None    S17N, I60V, I72V, T112V, I113V, T124N, K188R, I200M, V201I, L234I, I268L, R269K, D278A  
KE719832V2 KE719832V2 None    S17N, R20K, L45Q, I72V, L101I, T112I, I113V, T124N, T125A, K136Q, D167E, V201I, L234I, D256E  
KE725124V4 KE725124V4 None    K14R, S24H, V31I, L45Q, I72V, A98G, L101I, T112V, S119P, T122I, T124A, T125P, I135V, K136Q, E157H, K160T, V165I, V201I, K211R, K215R, L234I S283G, D288N 
KE726081V5 KE726081V5 None    K14R, V31I, S39C, I72V, T112V, I113V, T124G, T125A, K136Q, D167E, V201I, Q216H, L234I S283G 
KE757760V5 KE757760V5 None    K14R, S24N, V31I, I60L, L101I, K111R, T112V, T124N, K136Q, D167E, V201I, K211R, L234I, A265V, D278A R284G, D288N 
KE780221V3 KE780221V3 None    K14R, V31I, I60M, L63I, I72V, T112V, I113V, T124A, T125A, V126F, G134N, I135V, K136Q, V201I, A265V S283G, D288N 
KE795643V7 KE795643V7 None    K14R, A21T, V31I, S39N, D41N, I72V, L74I, T112V, I113V, T124A, T125A, G134N, K136Q, I141V, D167E, V201I, Q216N, L234V, V260I, I268L, R269K, D270N S283G, D286N 
KE809646V6 KE809646V6 None    K14R, D25E, V31I, V54L, I72V, T112V, I113V, T124A, T125A, D167E, V201I, T206S, L234V, D256E S283G 
KE809842V2 KE809842V2 None    K14R, V31I, I72V, L74V, T112V, T124N, T125A, K136Q, D167E, V201I, T218I, S255N, I268L  
KE830543V3 KE830543V3 None   V54I K7R, S17N, V31I, I60M, I72V, T112V, I113V, T124A, T125A, V126F, G134N, K136Q, L172I, V201I, K211R, Q214E, T218I, L234I Q252R, S283G, D286N 
KE851891V4 KE851891V4 None    K14R, A21T, V31I, S39N, I72V, L74I, T112V, I113V, T124A, T125A, G134N, K136Q, I141V, D167E, K188R, V201I, Q216N, L234V, V260I, I268L, R269K, D270N S283G, D286N 
KE860822V3 KE860822V3 None    K14R, S39C, I60M, I72V, T112V, I113V, T124A, T125A, V126F, K136Q, E157Q, K160Q, D167E, G193E, V201I, T218S, Y227F, N254K, S255K S283G 
KE870929V2 KE870929V2 None    D25E, L45I, M50T, I72V, F100Y, L101I, T112V, T124A, T125A, K136Q, D167E, V201I, T218I, L234I, D278T S283G 
KE880505V2 KE880505V2 None    S17N, I72V, L101I, T112V, T124A, T125A, A129S, K136Q, D167E, V201I, I268L S283G 
KE884468V5 KE884468V5 None    E11D, K14R, V31I, V32I, I72V, L101I, T112V, I113V, T124A, T125A, G134D, K136Q, G163T, D167E, V201I, T206S, I208L, E212A S283G 
KE888800V3 KE888800V3 None    S17N, D41N, I72V, L74I, T112V, I113V, T124A, T125A, G134D, K136Q, M154L, D167E, K173R, V201I, L234V, D256E  
KE894822V7 KE894822V7 None    D6E, K14R, L45Q, I72V, T112V, I113V, T124A, T125A, V126F, G134S, I135V, Q137L, D167E, V201I, K211R, L234I S283G 
KE897156V5 KE897156V5 None   T97A, G163R S17N, L101I, T112V, I113V, T124A, K156H, V165I, K188R, V201I, S255N, I268L V281M, S283G 
KE956490V3 KE956490V3 None   T97A S17N, N27G, P30H, M50L, L74I, L101I, T112V, I113V, T124A, T125A, G134D, K188R, V201I, N222K, L234I, D256E, I268L S283G 
KE961896V5 KE961896V5 None    K14R, S17N, M50L, L101I, T112V, S119P, T122I, T124A, T125S, I135V, K136Q, V165I, F185Y, V201I, T206S, K215R, I220V, L234I  
KE963379V4 KE963379V4 None    S17N, V31I, S39C, M50I, I72V, L101I, T112V, I113V, T124A, T125A, K136Q, D167E, V201I, L234I, A265V S283G, R284G, D288N