<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Neogi (2014)
Title Temporal trends in the Swedish HIV-1 epidemic: increase in non-B subtypes and recombinant forms over three decades.
Citation PLoS ONE
SelectedGene RT
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 48
NumPts 48
Subtype CRF01_AE, B, C, A, CRF02_AG, CRF06_cpx, D, G, B + CRF01_AE, CRF49_cpx

 

Clinical RT Isolates


SubjectIsolateNRTIsNNRTIsNRTI MutNNRTI MutCommonUnusual
20319 20319 TDF, FTC EFV   V35T, E36A, T39E, K122E, D123S, I135IT, K173A, D177E, T200A, E204K, Q207E, R211K, F214L, V245Q, A272P, K275R, V276I, K277R, Q278E, T286A, E291D, V292I, I293V, P294T  
20488 20488 ABC, TDF, 3TC EFV   I178IM, T200K, R211A, T286A, V292I, E297K  
2304 2304 TDF, 3TC EFV   E6D, K11T, V35T, T39K, K43E, S68G, K122E, D123N, I142IT, S162SAGT, T165TI, K173I, Q174K, D177E, I178M, Q207A, R211S, V245E  
2395 2395 TDF, FTC EFV M184LV  E6D, V35T, T39K, E40D, V60I, K122E, D123S, I135T, K173L, Q174K, P176PS, D177E, V179I, T200A, Q207A, R211S, F214L, V245Q, Y271F, T286A, E291D, V292I, I293V, E312K  
2443 2443 TDF, FTC EFV   D123E, I142V, T165I, I178M, R211K, A272P, K277R, E297K  
2531 2531 TDF, FTC EFV  K103N I142V, R211Q, R284K, T286A, V317VA  
26027 26027 TDF, FTC EFV   E6D, V35T, T39K, K122E, D123N, I142V, K173V, Q174K, D177E, Q207A, R211S, K238R, V245K, E291D, V292I, I293V, E312T, I329V  
26032 26032 TDF, FTC EFV  V179VE R83K, K122E, D123N, I135V, Q197QP, Q207E, R211K, V245E, A272P, K277R, V317A, Q334L  
26054 26054 TDF, FTC EFV   E6D, K11T, V35T, T39K, K43E, K122E, D123S, I135T, K173M, Q174K, D177E, I178M, V179I, Q207A, R211S, V245E, V261I, K281R, T286A, E291D, V292I, I293V, E305EG, E312T, V314M  
26057 26057 TDF, FTC EFV  Y181C E6ED, K11T, V21I, V35T, T39KR, K43E, K49R, V60I, D123NS, I135L, T165TI, K173R, Q174K, D177E, T200A, Q207A, L210M, R211S, K238KQR, V245E  
2707 2707 TDF, FTC EFV   S68G, K103Q, K122P, D123DE, I135R, T139TA, S162C, Q174R, D177E, G196E, T200A, R211K, K277R, T286A, A288S, V292I, I293V, I326V, Q334L  
28077 28077 TDF, FTC EFV   E6D, K11T, V35T, T39K, K43E, K101KR, K122E, D123S, I135T, I142T, Q174K, D177E, T200V, Q207AT, R211S, K238R, V245E  
31088 31088 TDF, FTC EFV   E6D, V8I, K11T, V35T, T39K, K43E, K122E, D123N, I135L, I142T, K173T, Q174K, D177E, G196A, T200I, Q207A, R211S, K238R, V245E, E291D, V292I, I293V, E312T  
355 355 TDF, 3TC EFV   Q207E, R211K, I293V, K311R, S322T, I329L  
37007 37007 TDF, 3TC EFV   M16K, V35T, E36A, T39E, E40D, S48T, K122E, E138A, A158S, K173T, D177E, I178M, V179I, T200A, Q207X D17~, G18~, P19~, K20~, V21~, K22~, Q23~, W24~, P25~, L26~ 
41002 41002 TDF, FTC EFV M184V V106M, V179D K20R, V35K, T39E, S48T, K122E, D123S, E169EK, R172RK, K173A, D177EK, G196K, Q197E, T200A, Q207E, R211K, Y232H, V245Q, E248D, D250E, A272P, K277R, T286A, E291D, V292I, I293V, P294T  
50162 50162 TDF, FTC EFV   V35T, E36A, T39E, K122E, D123S, Q145C, K173T, Q174K, D177E, I178L, T200A, E204D, Q207ADE, R211K, V245Q  
50285 50285 TDF, FTC EFV  V106M, Y188H T39E, D121H, K122E, I142V, K173T, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248D, D250E, A272S, K277R, T286A, E291D, V292I, I293V  
50403 50403 TDF, FTC EFV A62V, K65R, M184V L100I, K103N M16X, V35T, T39L, V60I, D121H, K122E, I135T, S162C, K173S, Q174K, D177E, T200A, Q207A, R211S D17~, G18~, P19~, K20~, V21~, K22~, Q23~, W24~, P25~, L26~ 
50497 50497 TDF, FTC EFV K65R, M184I K103N, L234I K22KN, I31L, V35L, T39I, V90I, K122E, I135V, I142V, S162Y, T200A, Q207G, R211K, V245M, E248N, A272P, K277R, P294Q, K311R, S322T, I329L  
50499 50499 TDF, FTC EFV  V179D E6D, K11T, V35T, T39R, K43E, K122E, D123N, I142V, K173T, Q174K, D177E, I178IM, T200A, Q207A, R211S, V245E  
50510 50510 TDF, FTC EFV   V35T, E36A, T39K, K43E, K102KR, K122E, D123S, K173A, D177E, I178V, T200A, Q207ADE, R211K, V245Q  
50554 50554 TDF, FTC EFV   E6D, K11T, V35T, T39K, K43E, K122E, D123S, I135V, S162C, K173I, Q174K, D177E, I178M, Q207A, R211S, K238R, V245Q, K277R, E291D, V292I, I293V  
50667 50667 TDF, FTC EFV   K11T, V21I, V35T, T39K, K43E, V106I, S162C, K173L, Q174K, V179T, Q207A, R211S, K238R, V245E, K281R, E291D, I293V, E312T, I326V, I329V  
50759 50759 TDF, FTC EFV   K122E, D123S, S162C, Q207A, R211S, K238R, V245E, A272P, I293V, E297K, K311R, E312T  
50860 50860 TDF, FTC EFV   E6*, K11T, V35T, A98S, D121H, I142V, D177E, I178M, T200M, Q207E, R211K, V245K, K249R, D250E, I257L, S268C, A272P, K277R, L282C, T286A, I293V, P294A, I329IV  
50954 50954 TDF, FTC EFV K65R, V75L K103N, V106M E6D, K11T, V35T, T39K, K43E, K122E, D123S, S162C, E169D, F171Y, K173R, Q174K, D177E, I178M, V179I, G196E, E203D, Q207A, R211S, K238R, V245E, K281R, T286A, E291D, V292I, I293V  
51049 51049 TDF, FTC EFV   M16X, V35T, V60I, K122P, S162A, K173L, Q174K, D177E, T200A, Q207E, R211K D17~, G18~, P19~, K20~, V21~, K22~, Q23~, W24~, P25~, L26~ 
51050 51050 TDF, FTC EFV  K103KN K20R, V35T, E36A, T39E, S48T, K122E, D123DGNS, K166R, K173KE, D177E, G196KR, T200A, I202V, Q207E, R211K, F214FL, V245E, E248D, D250E, A272P, K277R, T286AV, E291D, V292I, I293V  
51151 51151 TDF, FTC EFV   E6D, K11T, V35T, T39K, K43E, S68G, K122E, D123N, I135T, K173I, Q174K, D177E, T200A, Q207A, R211S, K238R, V245E, S251C, K277R, T286A, E291D, V292I, I293V, E312T, A327AV, I329V  
51376 51376 TDF, FTC EFV M184V V106M, V179E, Y181YC, F227FL V21I, V35T, K43N, K49R, E53D, V60I, T69N, I135V, S162A, E169D, K173M, Q174K, D177E, T200A, I202IV, Q207E, R211K, V245Q, E248D, A272P, K277R, T286A, E291D, I293V, E297A, G333E, Q334H  
51389 51389 TDF, FTC EFV   V35T, E36EA, T39E, S48T, K122E, D123DGNS, K173T, Q174K, D177E, T200A, I202IV, Q207E, R211K, V245Q, A272P, K277KR, T286A, E291D, V292I, I293V  
51443 51443 TDF, FTC EFV K65R, D67G, K219Q G190E E6D, V35T, S48T, V60I, K102KR, K122E, D123N, I135V, K173L, Q174K, N175H, T200A, Q207A, R211S, V245E, D250E, A272P, K277R, T286A, E291A, V292T, I293V, P294T, E312D, G335D  
51478 51478 TDF, FTC EFV   E6D, K11T, V35T, T39K, K43E, K122E, D123S, K173I, Q174K, D177E, G196GE, I202V, Q207A, R211S, V245E, T286TA, I293V, E312T  
51580 51580 TDF, FTC EFV   E6D, M16K, V35T, T39K, K43E, K122E, D123S, S162A, K173L, Q174K, D177E, Q207A, R211S D17~, G18~, P19~, K20~, V21~, K22~, Q23~, W24~, P25~, L26~ 
51807 51807 TDF, FTC EFV  V179D E6D, K11T, V35T, T39K, K43E, K64R, K122E, D123N, K173L, Q174K, D177E, T200A, Q207A, R211RS, V245E, E248ED, E291D, I293V, E312T, I329L, Q334QE  
51808 51808 TDF, FTC EFV   E6D, K11T, V35T, T39K, K43E, K64R, K122E, D123N, I135T, K173L, Q174K, I178M, E203ED, Q207A, R211S, I244IV, V245Q, E291D, V292I, I293V, E312T, I329L  
51846 51846 TDF, FTC EFV   E6D, K11T, V35T, T39N, V60I, D121Y, K122E, T139TA, I142V, K173I, Q174K, D177E, I178M, T200I, Q207A, L210M, R211S, V245E, T286A, V292I, I293V, E297K, A304E, K311R, E312T, I326V, I329V  
51949 51949 TDF, FTC EFV  V179D T39A, V111I, I135V, T200TS, F214L, K277R, Q278E, T286A, E308A, K311S, V317A, Q334L  
52086 52086 TDF, FTC EFV   T39D, V90I, A98S, K122E, D123S, I135T, Q145C, K173A, Q174K, D177E, T200A, Q207D, R211K, V245Q, A272P, T286A, E291D, V292I, P294T  
52130 52130 TDF, FTC EFV   V21I, V35T, T39E, K122E, D123S, I135V, S162C, K173T, Q174K, D177E, T200A, Q207G, V245Q, K249Q, A272P, E291D, V292I, I293V  
5343 5343 TDF, 3TC EFV  V108VI P14A, M16X, Q23X, V35T, T39A, E40D, K49R, E53D, K122KR, I135V, Q174AG, D177E, I178M, T200A, Q207G, R211K D17~, G18~, P19~, K20~, V21~, K22~, L26I, S162AE 
5433 5433 TDF, FTC EFV   M16X, L26X, V35I, R83K, I135T, A158S, S162C D17~, G18~, P19~, K20~, V21~, K22~, Q23~, W24~, P25~ 
5487 5487 TDF, FTC EFV   Q23X, V35T, E36D, V60I, I135V, S162A, K173T, Q174K, D177E, T200A, Q207E, R211RK G15R, M16N, D17~, G18~, P19~, K20~, V21~, K22~ 
638 638 TDF, FTC EFV   K11Q, V35T, T39M, D123KNRS, K173A, Q174K, D177E, Q207E, R211RK, V245Q, E248ED, D250E, S251D, A272P, K275Q, T286A, E291D, V292I, E297A, S322A, D324E, I329V  
7079 7079 TDF, FTC EFV   K20R, V35T, E36D, V60I, K122KE, D123DN, I135IV, E169D, K173AE, Q174K, D177E, T200A, Q207E, R211K, V245Q, E248D, D250E, S251I, K277R, T286A, E291D, V292I, I293V, P294T, S322T, I326V, Q334E  
7174 7174 TDF, FTC EFV   M16X, K49R, V60I, K64R, K122E, D123S, I135T, T139V, T200A D17~, G18~, P19~, K20~, V21~, K22~, Q23~, W24~, P25~, L26~ 
9715 9715 TDF, FTC EFV   V35I, K122E, D123DN, I135T, Q174QK, T200A, I202V, Q207ADE, R211K, V245VI, T286A, E291D, K311R, I329V, Q334E