Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Grossmann (2015)
Title Subtype-independent near full-length HIV-1 genome sequencing and assembly to be used in large molecular epidemiological studies and clinical management.
Citation J Int AIDS Soc
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 24
NumPts 24
Subtype C, B, CRF02_AG, CRF01_AE


Clinical IN Isolates

SE600001 SE600001 None    E11D, K111T, I113V  
SE600012 SE600012 None    E11D, A21T, M50I, G70E, I72V, S119R, A265V  
SE600023 SE600023 None    E11D, S24N, D25E, L45V, M50I, A80S, L101I, T112I, D256E  
SE600034 SE600034 None    E10D, E11D, V31I, V32I, S39R, M50I, K111T, S119R, V201I  
SE600035 SE600035 None    M50I, K136Q, G193E, D288N  
SE600046 SE600046 None    E11D, D25E, V31I, L101I, I113V, S119P, V201I, K211Q, T218S, D232E, D256E, S283G I73F 
SE600057 SE600057 None    E11D, S17C, L63I, L101I, T112V, S119P, T124S, T125A, K156N, E157Q, K160Q, V201I, Q216H, L234I, A265V H16L, V126D 
SE600063 SE600063 None    Q9P, E10G, E11G, E13G, Y15F, S17R, V31I, M50I, C56Y, A265V L2F, H12P, H16P 
SE600108 SE600108 None    E11D, S24N, D25E, V31I, I84M, F100Y, L101I, T112V, T124G, T125A, D167E, V201I, K215N, T218L, L234I  
SE600119 SE600119 None    E10D, E13D, V31I, M50T, I84M, L101I, T112V, T124G, T125A, K136Q, V201I, T218I, L234I, A265V, R269K, D278A, S283G  
SE600122 SE600122 None    M22I, L45V, M50I, K71R, L101I, T112V, T125A, K136Q, D167E, V201I, T218I, L234I, A265V, R269K, D278V, S283G  
SE600210 SE600210 None    V32I, S39C, M50I, I60V, F100Y, L101I, T112V, T125A, K136Q, V201I, Q221E, L234I, D278A, S283G  
SE600213 SE600213 None    D25E, V31I, L101I, T112V, T124Q, T125V, V126M, K173R, V201I, K215N, T218L, L234I, A265V, R269K, D278A, V281M, S283G, R284I  
SE600311 SE600311 None    D25E, V31I, L101V, T112V, T124N, T125A, G163E, D167E, V201I, K215N, T218L, L234I, D278A, S283G  
SE600314 SE600314 None    S17N, D25E, I72V, F100Y, L101I, T112V, T124N, T125A, K136Q, V201I, T218I, L234I, R269K, D278A, S283G  
SE600412 SE600412 None    E11D, D25E, L28I, V37I, M50I, I60V, I72V, F100Y, L101I, T112V, T125A, G163E, K215N, T218L, L234I, R269K, D278A G192A 
SE600415 SE600415 None    D6E, N18K, D25E, V31I, G59E, I72V, F100Y, L101I, T112V, T124N, T125A, V201I, I203M, T218I, L234I, A265V, R269K, D278A, S283G  
SE600516 SE600516 None    R20K, I72V, L101I, T112V, T124N, T125A, D167E, G193E, V201I, K215N, T218L, L234I, D278A, S283G  
SE601017 SE601017 None    S17N, V32I, L63V, I72V, L74I, T112V, T124A, T125A, G134N, I135V, K136Q, D167E, V201I, L234I, D270N, K273N I268N, M275I 
SE601018 SE601018 None    K14R, A21T, V31I, S39N, I72V, I84M, T112V, T124A, T125A, V126L, G134N, I135V, K136R, V165I, V201I, L234I, D256E, S283G  
SE601021 SE601021 None    K14R, A21T, V31I, S39N, I72V, Q95A, T112V, T124A, T125A, G134N, I135V, K136H, D167E, V201I, L234I, S283G I220I_RHNSNRHTN 
SE602019 SE602019 None    K14R, L45V, M50I, Y99F, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, K211R, T218I, L234I, D256E, S283G  
SE602020 SE602020 None    K14R, R20K, V31I, L101I, T112V, T124A, T125A, G134D, I135V, K136T, V201I, T206S, N222K, L234I, R269K, S283G  
SE602024 SE602024 None    K14R, S24N, V31I, L101I, T112V, S119T, T124S, T125A, G134N, I135V, K136T, V201I, T206S, I208L, T218I, N222Q, L234I, A265V, S283G