<!--#if expr="$title" --> <!--#echo var="title" --> <!--#else --> HIV Drug Resistance Database <!--#endif -->
Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.

References

Author Van Laethem (2008)
Title A genotypic assay for the amplification and sequencing of integrase from diverse HIV-1 group M subtypes.
Citation J Virol Methods
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 70
NumPts 70
Subtype B, A, C, CRF02_AG, D, CRF01_AE, G, F, CRF09_cpx, J

 

Clinical IN Isolates


SubjectIsolateINIsWksINIMajorINIMinorCommonUnusual
AR00-175 AR00-175 None    E11D, S17C, A23AV, I72V, S119P, T122TI, T124TA  
AR00-287 AR00-287 None    K7Q, K14R, L101I, T124A, T125A, I135V, D167E, V201I, T206S, I208L, K211R, E212A, T218I, K219Q, L234I, D256E S283G 
AR01-066 AR01-066 None    K14R, P30S, A38T, I72V, L101I, A105V, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, E212A, K219E, N222K, L234I, S255G, M275V  
AR01-109 AR01-109 None    S17N, I72V, T112V, I113V, T124A, E157Q, K160N, V201I, T218M, L234I, A265V  
AR01-273 AR01-273 None    A23V, S24G, V32I, I72V, L101I, V165I, T206S, D207DE, T210TI, L234I, D256E  
AR01-485 AR01-485 None    K14R, L63I, I72V, L74I, Y99F, L101IV, K103R, T112V, I113IV, S119P, T124A, T125A, G134D, I135V, I182IV, I200L, V201I, T206S, L234I, D256E S283G 
AR01-491 AR01-491 None    E13D, K14R, D25E, V31I, I84M, L101I, T112V, T124GS, T125A, K136Q, K173KR, V201I, T206S, K215KN, L234I, A265AV, R269K, D278A  
AR01-699 AR01-699 None    E11D, S24N, E96D, L101I, T112I, I113IV, S119R, T124TA, T125S, V201I, K219KQ, I220L, L234I  
AR01-751 AR01-751 None    E11ED, K14R, A21T, M50I, T124N, T125MV, V201I, K215N, I220L, S230N  
AR01-760 AR01-760 None    S17N, D25E, V31I, M50T, I84LM, F100Y, L101I, T112V, S119P, T124A, T125A, K136KQR, K188KR, V201VI, T206S, T218I, I220V, L234I, N254Q, A265V, R269K, D278A S283SG, R284RG 
AR02-025 AR02-025 None    K14R, R20K, A21AT, V31I, T112V, I113V, T124A, T125A, G134N, V201I, I220L, Y227F, L234I, S255G S283G 
AR02-071 AR02-071 None    S17N, I72V, T112V, I113V, T124A, E157Q, K160N, V201I, T218TM, L234I, A265V R284RG 
AR02-092 AR02-092 None   V151I E11D, D25E, I72V, L101I, S119P, T122I, T124A, K173R, E198D, V201I  
AR02-471 AR02-471 None    E11D, D25DE, V31I, I72IV, L101LI, S119SG, T122I, K215N, D256E T124DN 
AR02-689 AR02-689 None    E11D, A21T, V31I, I72V, T112A, I113V, T124A, T125A, V126F, I135V, K136R, D167E, K173R, V201I, L234I, I268L, D270H K186R, S283G 
AR02-766 AR02-766 None    K14R, V31I, V32VI, M50MI, I72V, L74I, T112V, I113IV, T124A, T125A, K136Q, D167E, V201I, K211KR, T218TI, L234IV S283G 
AR02-781 AR02-781 None    E10D, M50I, I60L, T124N  
AR02-852 AR02-852 None    K14R, V31I, I72V, I84M, L101I, K111KR, T112V, T124A, T125A, G134S, K136Q, D167E, V201I, L234I S283G 
AR02-884 AR02-884 None    K14KR, V32I, S39C, L101I, K103KR, T112TI, V201I, L234I  
AR02-969 AR02-969 None    K14R, A21T, V31I, I72IV, I84M, L101I, T112V, T124A, T125A, G134N, K136Q, D167E, V201I, L234I S283G 
AR03-1144 AR03-1144 None    K14R, L63I, I72V, L74I, Y99F, L101IV, K103R, T112V, I113IV, S119P, T124A, T125A, G134D, I135V, I182IV, I200L, V201I, T206S, L234I, D256E S283G 
AR03-1196 AR03-1196 None    K14R, V31I, L45Q, L101I, T112V, T124A, T125A, G134N, I135V, K136T, F181L, V201I, T206S, T218TI, L234I, S255N, D270H S283G 
AR03-1252 AR03-1252 None    K14R, V31I, I72V, I84M, L101I, K111R, T112V, T124A, T125A, G134S, K136Q, D167E, V201I, L234I S283G 
AR03-127 AR03-127 None    S17SN, M50I, S57SG, I72IV  
AR03-228 AR03-228 None    V31I, L74I, K111R, T112V, I113V, T124A, T125A, I135V, V201I, T206S, T218I, L234I, A265V, R269K S283G 
AR03-754 AR03-754 None   V151I K14R, L101I, T124A, T125A, G134GDNS, K136T, D167DE, H171Q, V201I, I208L, K211KR, L234I, D256E S283G 
AR04-1031 AR04-1031 None    K14R, A21T, N27H, V31I, V32I, S39N, M50MI, I72V, I84V, L101I, T112V, T124A, T125A, G134N, I135V, K136Q, V165I, D167E, V201I, L234I S283G 
AR04-1145 AR04-1145 None   E138ED E11ED, K14R, A21T, V31I, M50MI, I72V, G106A, T112V, T124GS, T125A, G134N, K136HQ, D167E, V201I, T218TI, L234V V281M, S283G 
AR04-1158 AR04-1158 None    E11D, K14R, S24H, V31I, L101I, T112IV, S119P, T122I, T124TA, T125S, I135V, K136Q, V201I, T206S, K215R, L234I, D256E S283G 
AR04-1171 AR04-1171 None    E11D, A21AT, S39X, I72V, T112M, I113V, S119A, T122I, T124A, T125A, V126F, I135IV, D167E, V201I, T210TA, K211Q, L234I, D253E E212EAPQ 
AR04-320 AR04-320 None    S24H, V31I, M50I, L101I, T112V, T124A, I135V, I141V, G163E, V201I, K215R, L234I, N254K, S255G S283G, R284G 
AR04-342 AR04-342 None    E11D, S24N, N27G, L74I, L101I, T112V, I113V, T124A, V201I, T206S, D207E, T218TI, L234T, S255S_G, I268V, D270N R224Q 
AR04-354 AR04-354 None    K14KR, S17N, S24D, D25E, V31I, M50I, I72V, I84IM, L101I, T112V, T124S, K136Q, K173R, V201I, T218TI, L234I, A265AV, R269K, D278A  
AR04-538 AR04-538 None    S17N, L101I, T112R, T124A, T125A, G134D, K136H, G193D, V201I, Q216QR, L234I, D256E, A265AT, I268IL, D270DH S283G, D286N 
AR05-073 AR05-073 None    S17N, V31I, S39N, I72V, K111T, T112V, S119P, T124A, T125A, G134D, D167E, V201I, N222K, L234I, A265AV, D270DN S283G 
AR05-1056 AR05-1056 None    K14KR, D25E, V31I, L101I, K111KT, T112V, S119SG, T122TI, T124N, T125A, G134N, I135V, E157Q, K160Q, F181L, K188KR, V201I, T206S, T218I, N222NH, L234I, D256E, A265V S283G 
AR05-1089 AR05-1089 None    K14R, V31I, L74I, L101I, K111R, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, T218TI, K219N, N222K, L234I, R269K  
AR05-1284 AR05-1284 None    E11D, S24N, D25E, V31I, L101I, T112V, T124A, K136Q, V201I, T218I, L234I, A265V, R269K, D278A S283G 
AR05-390 AR05-390 None    V31I, D41N, I72V, I84M, F100Y, T112V, T124N, T125A, K136Q, I200M, V201I, I203M, L234I, D256E  
AR05-569 AR05-569 None    K7KR, K14R, V31I, S39N, L45Q, L101I, T112V, T124A, T125A, G134DN, I135V, K136T, V201I, T206S, T218TI, L234I, N254ND, S255N, D270H S283G 
AR05-661 AR05-661 None    S17SN, V31I, L101I, I113L, T124A, T125V, K136Q, V201I, T206S, Y227YF, L234T, S255N, D256E S283G, R284G, E287Q 
AR05-673 AR05-673 None    K14R, A21T, A23V, V31I, I72V, L101V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, I217IV, L234I V281VM, S283G 
AR05-747 AR05-747 None    K14R, S24SN, V32I, S39N, L45Q, L101I, T112V, T124A, T125A, G134N, I135V, K136T, V201I, T206S, T218I, L234I, S255N, D270H S283G 
AR05-756 AR05-756 None    S17N, V31I, S39C, L45LV, M50I, F100Y, L101I, T112V, T124N, T125A, G193GDE, V201I, K215KN, T218I, L234I, A265V, R269RK, D278A S283G 
AR05-781 AR05-781 None   E138ED E11D, K14R, A21T, V31I, M50MIT, I72V, G106GA, T112V, T124A, T125A, G134N, I135V, K136KQ, V201I, L234I S283G 
AR06-009 AR06-009 None    K14R, S17N, V31I, L74I, L101I, T112V, I113L, T124A, T125A, G134N, K136T, V201I, T206S, T218I, L234I, S255N, D256E  
AR06-1056 AR06-1056 None    K7R, S17N, V31I, G106A, T112I, S119P, T124A, T125A, G134N, I135V, K136Q, V201I, T206S, T218S, Y227F, L234I, S255N, D256E S283G 
AR06-1186 AR06-1186 None    E11D, K14R, S24N, V31I, L101V, T112V, T124N, T125A, G134N, K136RT, G163E, V201I, T206S, T218A, Y227F, L234I, S255N, D256E S283G 
AR06-1245 AR06-1245 None    E10D, S24N, S119P, T122I, T124A, K173R, T218S  
AR06-2205 AR06-2205 None    K14R, S17N, L101I, T112V, T124N, T125A, G134N, I135V, K136T, K173R, V201I, A205AS, T206S, T218I, L234I, K240KR, D256E S283G 
AR06-225 AR06-225 None   V151I K7Q, E11D, L101I, S119SAGT, T122I, T124A, T125TA, G134N, D167E, V201I, I208L, L234I S283G 
AR06-2632 AR06-2632 None    E11D, S17ST, V37VI, I72V, I73IV, I84IM, A91AG, K111R, T112V, I113V, T124GS, T125TA, K160KQ, D167E, V201I, I208IM, K211R, L234I, S255G  
AR06-505 AR06-505 None    K14R, S24G, D25E, S39N, L45V, L101I, T112V, T125A, K136Q, V201I, L234I, D278A A282P, S283G 
AR06-602 AR06-602 None    K14R, V31I, V32I, L101I, T112V, T124N, T125A, G134N, K136T, E157Q, V201I, T206S, N222K, L234I, V259I, K273Q S283G 
AR06-659 AR06-659 None    S17C, R20K, M50I, I72V, T112IL, T124A, T125TA, K136Q, V165I, V201I, A205S, T206S, T218I, L234V, D256E S283G 
AR07-050 AR07-050 None    E13D, S17N, V31I, I84M, F100Y, L101I, T112V, T124S, T125A, K136Q, K173R, V201I, L234I, D256E, R269K, D278A R284G 
AR07-1554 AR07-1554 None    E13D, S17N, V31I, I84M, F100Y, L101I, T112V, T124S, T125A, K136Q, K173R, V201I, L234I, D256E, R269K, D278A R284G 
AR07-1637 AR07-1637 None    S17SN, V31I, L74I, I84IM, L101LI, K111R, T112V, T124A, T125A, I135V, G163A, V201I, T206S, K211KR, T218IL, K219Q, L234I S283G 
AR07-1935 AR07-1935 None    S17C, M50I, G59GE, I72V, T206S, A265V G189GE 
AR07-1965 AR07-1965 None    V32L, I72V, L74I, L101I, K111Q, T112A, S119T, T124N, T125A, K156R, F181L, K219N, N222K, V259I D286N 
AR07-2127 AR07-2127 None    V32I, L45I, I60M, I72V, E157Q, K160E, F181Y, I182V, T206S, Y227F, N254K, S255G, D256E  
AR07-2743 AR07-2743 None    K14R, A21T, V31I, I72V, T112V, T124A, T125A, G134N, I135V, K136R, V165I, D167E, V201I, K215N, L234I S283G 
AR07-955 AR07-955 None    S17N, V31I, I84M, L101I, T112V, T124N, T125A, K136Q, V201I, L234I, A265V, R269RK  
H97-3457 H97-3457 None    E11D, S17C, A23V, I72V, S119P, T122I, T124TA  
P00-200 P00-200 None    V32I, K34KR, S39SC, V77VI, L101I, V201I, L234I  
P00-235 P00-235 None    V31I, L63V, I72V, L74LV, T112V, T124A, T125A, G134D, D167E, K173R, T218S, Y227F, L234I, K240R, S255N, D256E S283G 
P00-470 P00-470 None   V151VI R20K, M50T, T206S S283G 
P00-530 P00-530 None    K14R, L101V, T112V, S119P, T124A, T125A, G134N, K136T, V201I, I208L, T218I, L234I, D256E S283SG 
P98-015 P98-015 None    K14R, A21T, V31I, S39SN, I72V, T112V, T124A, T125A, G134N, I135V, K136R, D167E, V201I, L234I S283G 
P99-538 P99-538 None    E11D, E13D, V37I, M50L, I72V, I84L, L101I, S119P, T122I, T124A, K136Q, V201I, A205S, K211R, T218I, L234V, D256E S283G