Stanford University HIV Drug Resistance Database - A curated public database designed to represent, store, and analyze the divergent forms of data underlying HIV drug resistance.


Author Hurt (2014)
Title Resistance to HIV integrase strand transfer inhibitors among clinical specimens in the United States, 2009-2012.
Citation Clin Infect Dis
SelectedGene IN
SelectedSpecies HIV1
SelectedGroup M
SelectedType Clinical
NumIsolates 3332
NumPts 3332
Subtype B, C, CRF02_AG, A, CRF01_AE, D, G, F


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Page 1   listing Isolate 1 to Isolate 100 from Total 3332 Clinical IN Isolates

IN_1019 IN_1019 RAL  T66TI, N155H L74M, T97A, V151I D6E, S17N, M50I, I72V, L101LI, S119R, K156N, V201VI, I208M, E212A  
IN_1060 IN_1060 RAL  N155H V151VI, G163GR A265V  
IN_1064 IN_1064 RAL  G140S, Q148H  S17N, A21S, A23V, V31I, L45V, I72IV, L101I, T124A, T125A, V126A, V176L, T218S  
IN_1078 IN_1078 RAL  N155H V151I, G163R K111R, T112I, T124A, V201I  
IN_1083 IN_1083 RAL  G140S, Q148H  V31I, K111T, I113V, T125A, G189GR, G197GR, I203M  
IN_1151 IN_1151 RAL  E138EK, Q148R  K14R, S17N, K34R, M50V, I72V, T124A, V201I, S283G, R284RG  
IN_1156 IN_1156 RAL  G140S, Q148H V151VA E11D, K14KR, L101I, F139FY, S195T, I203M, R284G  
IN_1160 IN_1160 RAL   L74M, T97A, Y143AS, S230R S17N, V31I, K34R, S39R, S119T, T124A, T206S, D229E  
IN_1169 IN_1169 RAL  Y143R L74M E11D, S24N, V31I, L101I, T112A, S119ST, E157EQ, V201I, T218L, K219Q, L234I K160KI 
IN_1171 IN_1171 RAL  N155H V151I, G163GR V31VI, L101I, T112I, I135IV, F181FL, I220L, D232DN, D253DE  
IN_1185 IN_1185 RAL  G140S, Q148H  E11D, V31I, V37I, L63I, L101I, K111T, S119T, T124N, T125V, I135V, V201I, S283G  
IN_1256 IN_1256 RAL  Y143R T97TA E11D, V31I, M50I, K111T, S119SG, T122I, T124S, V201I  
IN_1273 IN_1273 RAL  E138EK, S147SG, Q148QR V151VI D25DE, V31VI, I72V, T124TA, I182V, V201I, I208IM, S230N, I251IL, D256E, R284G  
IN_129 IN_129 RAL  E92EQ, N155H  S17N, M50I, I72V, L101I, T124A, G163T, T206S, T218S, Y227F, D256E, A265V  
IN_1304 IN_1304 RAL  N155H  E11D, S17T, L45V, M50I, L101I, S119R, I135V, G163E  
IN_1331 IN_1331 RAL  E92Q L74M S39C, L45Q, L63I, Q216N, L234I, D270H, R284G I72L 
IN_1429 IN_1429 RAL  G140S, Q148H  L101I, T124A, T125V, T206S, I208L, K215N, I220IL, Y227YF, N254K, S255G, I268L, R269K, D270H, S283G  
IN_1459 IN_1459 RAL  N155H T97A S17N, M50MV, L101I, K111R, T112I, S119R, T124G, T125A, V165I, E198D, V201I, I220L, Y227F, D256E, D278DN  
IN_1481 IN_1481 RAL  Y143YCHR  P30S, S39C, L45LI, M50I, I60V, I72V, L101I, S119T, T124A, E157Q, K160Q, V201I, I220V, D253E, N254G, S283G  
IN_1525 IN_1525 RAL  G140S, Q148H  E11D, S24N, D25E, V31I, I72V, L101IV, S119P, T122I, T124A, M154I, V165I, T218S, D253E  
IN_159 IN_159 RAL  G140CS, Q148QR, N155NH V151VI K14R, V31I, A80S, L101I, T112TA, T122TA, T124N, E157EQ, K188R, V201I, A265AV, R269K, E287EA  
IN_16 IN_16 RAL  T66TK, G140GS, Q148QR L74LIM S17N, V31I, I72IV, L101I, T124A, E157Q, K160Q, T206S, I208IM, S283SG  
IN_1622 IN_1622 RAL  E138K, S147G, Q148R Q95K K14R, R20K, V32I, L45V, L101I, K103R, T124A, G163E, V201I, K215N, N222K, D270H  
IN_1628 IN_1628 RAL  E138EA, G140S, Q148H  D25E, P30S, S39C, I72IV, T124N, T125AV, V201I, T206S, I220L, I251L, M275V  
IN_1658 IN_1658 RAL  N155H  S24A, G59E, L101I, S119P, T124A, K136N, D256E D232S 
IN_1661 IN_1661 RAL  N155NH V151VI E11D, V31VI, L101I, V150A, E157Q, K160Q, V176L, S195T, D256DE, Q285R  
IN_1685 IN_1685 RAL  G140S, Q148H  S17N, V31I, I72V, L101I, T112V, T124A, F185Y, T206S, I268L, D270H  
IN_1725 IN_1725 RAL  G140S, Q148R  A23V, I72V, K211Q  
IN_1732 IN_1732 RAL  N155H  E11D, S24G, V31I, V79VI, L101I, S119P, T122I, Q214E, Q216N, T218TS  
IN_1739 IN_1739 RAL  E138K, G140S, Q148H  I72V, L101I, Y194C, I220M, N222K, Y227F, A265V, R284G  
IN_1772 IN_1772 RAL  G140S, Q148H  S17N, V31I, L45V, L101I, G163E, H171Q, V201I, T218S, L234I  
IN_1807 IN_1807 RAL  G140S, Q148H E138D K14KR, S17N, R20RK, M50L, I60IM, T112V, T124A, K156KN, T206S, K211R, T218S, V259VI  
IN_1808 IN_1808 RAL  N155H V151I, G163K D6E, E11D, S24N, V31I, K42R, M50I, I73V, L74I, I84L, Q95H, L101I, I113L, T124HQ, E157Q, K160Q, V201I, T206S, K211R, L234LV, K240R  
IN_1859 IN_1859 RAL  G140S, Q148H  K111R, D256E, D278A, S283G, R284G  
IN_1874 IN_1874 RAL  E92EQ, N155NH V151VI D41DN, M50I, I72V, P90A, T124A, K156KN  
IN_1881 IN_1881 RAL  Y143R T97A V32I, D41N, I72V, V126M, T206S  
IN_1894 IN_1894 RAL  N155H V151I S17N, I72V, A98G, K111R, I113V, T124A, T125A, V126F, E170A, V201I, I220L, I251V D55DE 
IN_1901 IN_1901 RAL  E138A, G140S, Q148H  D25E, P30S, S39C, T124N, T125AV, V201I, T206S, I220L, I251L, M275V  
IN_1916 IN_1916 RAL  G140A, Q148K  S17N, N27H, V31I, E35Q, S39N, D41N, M50I, L101I, G163T, G193E, V201I, T218S, I220L, Y227F, L234V  
IN_192 IN_192 RAL  E138EK, Q148QR  E11D, V31I, A38K, L45Q, I72V, I84V, T124N, G163E, G193E, V201I, D278A  
IN_197 IN_197 RAL  G140S, Q148H  K14R, L28I, S39C, V201I, R284G  
IN_2034 IN_2034 RAL  N155H E138D I72V, T112I, T125V, D167EG, S195C  
IN_2055 IN_2055 RAL  Q148QR, N155NH  I72V, S119G, T122I, T124A, V201VI, K215N  
IN_207 IN_207 RAL  G140S, Q148H  L63I, G70N, L101I, T125A, F181L, V201I, I208L, T218S, S283G  
IN_210 IN_210 RAL  N155H, R263RK V151I E11D, K14R, S17T, A23V, L28I, P30A, I72V, V201I, T206S, D232DN  
IN_2211 IN_2211 RAL  N155H L74LM E11D, K14R, R20K, V31I, S39C, M50I, T112V, I113V, T124A, L158I, V201I, T206S P142PT, R166RT 
IN_2223 IN_2223 RAL  E138EK, G140S, Q148H  K14R, S17C, M50I, I72V, T125A, I135V, M154I, R187RK, T206S, K219N, N222K, D286N  
IN_2227 IN_2227 RAL  E92EQ, N155NH A128AT E10D, V31VI, M50MI, T125V, K156KN, V165I, D256E  
IN_2247 IN_2247 RAL  N155NH  K14R, K34KR, I72IV, L101I, K111KT, S119SR, T124A, T125TA, I135V, F181L, K188KR, V201I, T206TS, K211KR, K219KN, N222K, S255SN, A265AV, I268IL, D270DN, K273KQ, R284RG, D286DN  
IN_241 IN_241 RAL  N155H  E11D, D25E, L101I, K111T, T122I, S230N P58PS 
IN_2414 IN_2414 RAL  Y143C V54I, T97A, S230R S17N, V31VI, L74I, L101I, T112A, S119T, T124A, R187K, K188R, K211R, D256E  
IN_2419 IN_2419 RAL  Q148QR  K14KR, M50T, V201I, Q216QH, K219KN, N222NK  
IN_2478 IN_2478 RAL  Y143C S230R V31I, M50I, G163T, K173KR, T206S, T218S, I220M  
IN_2486 IN_2486 RAL  E138EK, G140GA, Q148QR, N155NH T125TK, V151VI V31I, I141IV, T206S, D232E  
IN_2564 IN_2564 RAL  Y143C V151VI, G163R E11D, S24N, D25E, V31I, V75M, L101I, T125A, A205T, T218S, N254K, S255G, R284G L104M, S230K 
IN_2589 IN_2589 RAL  Y143C T97A, S230R K14R, L63LI, L74I, L101I, S119ST, G134GE, D167E, I208L, K211Q  
IN_265 IN_265 RAL  E138K, G140S, Q148H  K14R, V31I, S39C, M50I, L101I, T124A, M154I, V201I, K211Q, S230N, L234I, D253E  
IN_2676 IN_2676 RAL  N155H  D6E, E10D, R20K, V31I, M50I, L101I, I113V, S119P, T122TI, T124N, T125A, K156N, E157Q, V201I, A265V  
IN_2852 IN_2852 RAL  G140S, Q148H  D25E, P30A, L101I, T112A, T125A, V201I, S230N, R231K, S283G  
IN_2898 IN_2898 RAL  Y143YH  T124A, V126M, K156N, S195C Q209QR 
IN_2966 IN_2966 RAL  N155NH  R20K, L101I, K111R, T112V, F181L, G193E, V201I, D256E, D279N  
IN_3026 IN_3026 RAL  G140S, Q148H  G59GE, I72V, L101I, T112I, V201I, T206S, K215N  
IN_3040 IN_3040 RAL   T97TA, N155ND E11D, L28I, V37I, S39C, M50I, I72V, T112A, T124A, T125A, D167E, V201I, D253E, S283G  
IN_3081 IN_3081 RAL  N155NH V151VI, G163EK S17N, L45V, M50I, I72IV, L101I, I113V, T124A, E157EQ, K160KT, V201VI, D256E, I267IV  
IN_3083 IN_3083 RAL  N155NH  M50I, I73V, T206S, S283SG  
IN_3146 IN_3146 RAL  Y143C T97A, S230R K14R, V31I, L101I, S119T, T124A, V201I Q95AT 
IN_321 IN_321 RAL  G140S, Q148H T97A E11D, V31I, I72IV, T112TI, S119P, T122I, T125A, V126VL, G163GV, V201I, N254Q, S255G  
IN_376 IN_376 RAL  N155H E138D, V151I S17N, M50L, L101I, T124A, D167E, K188R, I220L, D232N, I251IL, A265V, R269RK  
IN_399 IN_399 RAL  E138K, G140S, Q148H  E10D, V31I, A49P, I72V, T112A, T124A, K156N, V165I  
IN_443 IN_443 RAL  E92Q, N155H E138ED S17N, I72V, T112I, T124A, T125V, T206S, D232DN, D279DG  
IN_46 IN_46 RAL  N155H G163K E10D, L101I, S119P, T122I, V201I, T218S, D256E  
IN_511 IN_511 RAL  Q148QR, N155NH  K14R, S17N, M50T, I72V, T124A, K156N, V201I, L234LF, D256E  
IN_534 IN_534 RAL  E138EA, G140S, Q148H  K14R, R20K, V31I, L101I, T124A, G193D, V201I, K211Q, T218I, R228RG, R231K, L234LF, A265V, R269K, D278A  
IN_543 IN_543 RAL  E138K, Q148R A128T S17N, I72V, P90S, L101I, K156N, V201I, I220V  
IN_601 IN_601 RAL  E138A, G140S, Q148H  E11D, S24N, D41N, I72V, T112A, S119P, L234LF  
IN_612 IN_612 RAL  E138A, G140A, Q148R  K14R, L101I, S119P, T124A, K136T, I203M, I208M, T218S, Y227F, L234I, D256E P142T 
IN_617 IN_617 RAL  G140S, Q148R L74IM E11D, L28I, V37I, I72V, L101I, T112K, S119P, T122I, T124A, T125A, D167E, K211Q, Q216QR, L234V, A265V  
IN_633 IN_633 RAL  G140S, Q148H  M50I, I72V, S119P, T122I, T124A, T125V, G163AE, D256E, S283G  
IN_634 IN_634 RAL  G140S, Q148H  M50I, I72V, S119P, T122I, T124A, T125V, G163AE, D256E, S283G  
IN_646 IN_646 RAL  G140S, Q148H  R20K, V31I, Y99F, L101I, T122I, T124A, T125AV, G163Q, V201I, I208IM, L234I  
IN_65 IN_65 RAL  E138K, S147G, Q148R  K7R, K14R, K71N, V79VI, A91AT, S119R, T124N, T125A, K156N, G193E, V201I, N222K, S230N, L234V  
IN_663 IN_663 RAL  E138K, G140S, Q148H  I72V, L101I, Y194C, I220M, N222K, Y227F, A265V, R284G  
IN_665 IN_665 RAL  N155H Q95K I72V, K111T, I113V, T124A, K173R, D253E  
IN_668 IN_668 RAL  Y143C T97A, G163R, S230R S17N, T124A, T125A, K211Q, S283SG  
IN_71 IN_71 RAL  N155H  P30A, L101I, T112A, A196P, E212A, Q216H  
IN_729 IN_729 RAL  N155H V151I E11D, K14R, V31I, D41DN, M50MI, I84LV, L101LV, I113V, S119R, K156KN, E157Q, K160KQ, V201I, T206S, I208M, T218S, R284RG T97V 
IN_750 IN_750 RAL  N155H V151I D25DE, V31I, M50I, D232N, A265V  
IN_752 IN_752 RAL  N155H  E11D, S24N, D25E, L101I, S119P, T122I, K136N, D279DN  
IN_79 IN_79 RAL  E138K, G140GS, S147SG, Q148KR  E11D, V79VI, T93S, L101I, G189R, V201I, K211Q, Q216H, T218S, N222K, S230N, L234I, A265V, K273Q  
IN_800 IN_800 RAL  Y143R L74M, T97A S17N, S119T, E157Q, K160Q, V201I, D256E, R284G  
IN_819 IN_819 RAL  Y143R G163R V31I, I72V, V75M, T206S, S230N  
IN_847 IN_847 RAL  G140S, Q148H  K7KR, S17N, S24D, L28I, L45V, I72V, I84IM, T112TS, T124AS, S283SG  
IN_867 IN_867 RAL  N155H  A23V, S24G, L28I, I72V, T112A, S119P, T124N, T125A, I182V, S230N, R231K V165L 
IN_870 IN_870 RAL  G140S, Q148H  H51HR, L101I, G106A, I113V, T124S, T125A, D167E, L234I  
IN_882 IN_882 RAL  N155H  E11D, S17C, L101I, I113V, S119R, T125A, D256E  
IN_883 IN_883 RAL  E92Q T97A, V151I S17N, L28I, A49P, I72IV, K111R, S119T, T124A, T125A, V165VI  
IN_937 IN_937 RAL  G140S, Q148H  K7Q, E11D, R20RK, V31I, I113V, T124N, T125A, G193E, T218I, S230N, D256E, D286N  
IN_94 IN_94 RAL  G140S, Q148H  S39C, M50I, I72IT, L101I, V201I, T206S, K211R, K219N, D286N  
IN_954 IN_954 RAL  Y143R L74M, Q95K, T97A D6E, E10D, S17T, A23V, A91T, L101I, S119P, T122I, T124A, T125A  
IN_960 IN_960 RAL  N155H G163K D6E, S17N, L101I, T124N, V201I, D270E